Rtn4 (reticulon 4) - Rat Genome Database

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Gene: Rtn4 (reticulon 4) Mus musculus
Analyze
Symbol: Rtn4
Name: reticulon 4
RGD ID: 730920
MGI Page MGI
Description: Predicted to enable several functions, including cadherin binding activity; protein homodimerization activity; and ubiquitin protein ligase binding activity. Involved in several processes, including positive regulation of leukocyte migration; positive regulation of signal transduction; and vasculogenesis. Acts upstream of or within blastocyst formation; cardiac epithelial to mesenchymal transition; and nervous system development. Located in cell projection; endoplasmic reticulum membrane; and postsynaptic density. Is active in glutamatergic synapse and postsynapse. Is expressed in several structures, including central nervous system; genitourinary system; limb mesenchyme; sensory organ; and skeletal musculature. Orthologous to human RTN4 (reticulon 4).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110020G17Rik; AA407876; AA409940; AA960376; ASY; C130026I10Rik; KIAA4153; mKIAA0886; mKIAA4153; N; neurite outgrowth inhibitor; NgA; No; Nog; NOGO; Nogo-A; Nogo-B; Nogo-C; NSP-CL; reticulon-4
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391129,642,898 - 29,694,414 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1129,642,947 - 29,694,331 (+)EnsemblGRCm39 Ensembl
GRCm381129,692,898 - 29,744,414 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1129,692,947 - 29,744,331 (+)EnsemblGRCm38mm10GRCm38
MGSCv371129,592,898 - 29,644,414 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361129,592,947 - 29,642,916 (+)NCBIMGSCv36mm8
Celera1132,055,366 - 32,110,540 (+)NCBICelera
Cytogenetic Map11A3.3NCBI
cM Map1116.79NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (ISO)
2-amino-14,16-dimethyloctadecan-3-ol  (ISO)
3-chloropropane-1,2-diol  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
amiodarone  (EXP)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzene  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bexarotene  (ISO)
bisphenol A  (EXP,ISO)
Brodifacoum  (ISO)
caffeine  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chloropicrin  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
cisplatin  (EXP)
clofibrate  (EXP)
clozapine  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibutyl phthalate  (EXP)
dieldrin  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
flavonoids  (ISO)
flutamide  (ISO)
folic acid  (EXP)
FR900359  (ISO)
furan  (ISO)
genistein  (ISO)
gold atom  (EXP)
gold(0)  (EXP)
haloperidol  (EXP)
hydrogen peroxide  (EXP)
ivermectin  (ISO)
L-methionine  (EXP)
lead diacetate  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
maneb  (EXP)
manganese(II) chloride  (EXP)
mercury atom  (ISO)
mercury(0)  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
methylmercury(1+)  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
nickel dichloride  (ISO)
nickel subsulfide  (ISO)
nitrofen  (ISO)
olanzapine  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phencyclidine  (EXP)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP,ISO)
propiconazole  (EXP)
pyrogallol  (EXP)
resveratrol  (EXP)
SB 431542  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sirolimus  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
succimer  (EXP)
sunitinib  (ISO)
tamoxifen  (EXP,ISO)
testosterone  (EXP)
testosterone undecanoate  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (EXP,ISO)
trichostatin A  (ISO)
triptonide  (EXP)
urethane  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (IMP)
axonal fasciculation  (IMP,ISO)
blastocyst formation  (IMP)
brain development  (IBA)
cardiac epithelial to mesenchymal transition  (IMP)
cell adhesion involved in sprouting angiogenesis  (ISO)
cell migration involved in vasculogenesis  (IMP)
cellular response to hypoxia  (IDA)
central nervous system vasculogenesis  (IMP)
cerebral cortex radial glia-guided migration  (IMP)
endoplasmic reticulum organization  (ISO)
endoplasmic reticulum tubular network formation  (IBA,ISO)
endoplasmic reticulum tubular network membrane organization  (ISO)
endoplasmic reticulum tubular network organization  (ISO)
intracellular sphingolipid homeostasis  (IMP)
leukocyte migration involved in inflammatory response  (IMP)
modulation of chemical synaptic transmission  (EXP,IDA,IMP)
negative regulation of amyloid-beta formation  (ISO)
negative regulation of axon extension  (IMP,ISO,ISS)
negative regulation of axonogenesis  (ISO)
negative regulation of cell growth  (ISO)
negative regulation of dendrite extension  (IMP)
negative regulation of formation of growth cone in injured axon  (IMP)
negative regulation of neuron differentiation  (ISO)
negative regulation of neuron projection development  (ISO)
negative regulation of neuron projection regeneration  (ISO)
negative regulation of vasculogenesis  (IMP)
nervous system development  (IDA)
neuron differentiation  (IBA)
nuclear pore complex assembly  (ISO)
olfactory nerve development  (ISO)
oligodendrocyte differentiation  (ISO)
positive regulation of angiogenesis  (IMP)
positive regulation of artery morphogenesis  (IMP)
positive regulation of collateral sprouting of injured axon  (IMP)
positive regulation of dopamine secretion  (ISO)
positive regulation of epithelial cell migration  (ISO)
positive regulation of ERBB3 signaling pathway  (ISO)
positive regulation of glial cell differentiation  (ISO)
positive regulation of hepatocyte proliferation  (IMP)
positive regulation of macrophage cytokine production  (IMP)
positive regulation of macrophage migration  (IMP)
positive regulation of mammary gland epithelial cell proliferation  (ISO)
positive regulation of neutrophil migration  (IMP)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (ISO)
positive regulation of protein localization to endoplasmic reticulum  (ISO)
positive regulation of Rac protein signal transduction  (IMP)
positive regulation of toll-like receptor 9 signaling pathway  (IMP)
protein localization to lysosome  (IMP)
protein stabilization  (IMP,ISO)
regulation of branching morphogenesis of a nerve  (IMP,ISO)
regulation of cell migration  (ISO)
regulation of nervous system development  (IMP)
response to activity  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80.
7. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Hippocampal Nogo-A and neo-Timm's staining in amygdala kindling rats. Takeda Y, etal., Neurol Res. 2007 Mar;29(2):199-203.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10667797   PMID:10725249   PMID:10834841   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11126360   PMID:11201742   PMID:12225863   PMID:12477932  
PMID:12480514   PMID:12488097   PMID:12520002   PMID:12691732   PMID:12718850   PMID:12718854   PMID:12718855   PMID:12718856   PMID:12839991   PMID:12904583   PMID:14534257   PMID:14592966  
PMID:14610273   PMID:14664809   PMID:15034570   PMID:15121177   PMID:15240813   PMID:15345747   PMID:15489334   PMID:15640160   PMID:15782199   PMID:15998744   PMID:16092935   PMID:16095439  
PMID:16141072   PMID:16141073   PMID:16195464   PMID:16407455   PMID:16512683   PMID:16602821   PMID:16723516   PMID:16766706   PMID:16828122   PMID:16835300   PMID:16979591   PMID:17039253  
PMID:17114649   PMID:17122049   PMID:17192421   PMID:17229389   PMID:17442241   PMID:17442242   PMID:17957480   PMID:17967808   PMID:17971502   PMID:18214994   PMID:18234903   PMID:18287559  
PMID:18334965   PMID:18478548   PMID:18632947   PMID:18799693   PMID:18986647   PMID:19077178   PMID:19156209   PMID:19208621   PMID:19369640   PMID:19386232   PMID:19400741   PMID:19546827  
PMID:19555742   PMID:19587271   PMID:19699797   PMID:19805174   PMID:19833111   PMID:19889996   PMID:19892785   PMID:20071518   PMID:20087369   PMID:20093372   PMID:20433905   PMID:20484625  
PMID:20547125   PMID:20573699   PMID:20926648   PMID:20938157   PMID:20971739   PMID:20975041   PMID:21183689   PMID:21251247   PMID:21262805   PMID:21267068   PMID:21454605   PMID:21480333  
PMID:21636572   PMID:21697531   PMID:21817055   PMID:21873635   PMID:21980529   PMID:22046273   PMID:22083510   PMID:22160722   PMID:22193546   PMID:22406547   PMID:22411787   PMID:22860215  
PMID:22964785   PMID:22988430   PMID:23103965   PMID:23223298   PMID:23274909   PMID:23277570   PMID:23299899   PMID:23313137   PMID:23473316   PMID:23625008   PMID:23909438   PMID:24051375  
PMID:24103058   PMID:24129566   PMID:24157929   PMID:24278366   PMID:24453941   PMID:24558039   PMID:24803591   PMID:25078756   PMID:25184636   PMID:25257170   PMID:25284126   PMID:25331889  
PMID:25737280   PMID:25904793   PMID:25907690   PMID:25917084   PMID:25946643   PMID:26174362   PMID:26301690   PMID:26348872   PMID:26472924   PMID:26635533   PMID:26718118   PMID:26748478  
PMID:26755743   PMID:27276652   PMID:27349794   PMID:27353365   PMID:27763637   PMID:27786289   PMID:27869233   PMID:27927704   PMID:27956620   PMID:28000762   PMID:28505229   PMID:28543060  
PMID:29217477   PMID:29795235   PMID:29950598   PMID:30019429   PMID:30040841   PMID:30051920   PMID:30055160   PMID:30562941   PMID:30704515   PMID:30762478   PMID:31006538   PMID:31217174  
PMID:31235580   PMID:31361595   PMID:31654717   PMID:31748413   PMID:32075961   PMID:32325033   PMID:32492476   PMID:32554809   PMID:33039527   PMID:33572505   PMID:33601422   PMID:33942723  
PMID:34255829   PMID:34321999   PMID:34406553   PMID:34601991   PMID:35431138   PMID:35771867   PMID:36076559   PMID:36293380   PMID:36417873   PMID:36931495   PMID:37228035   PMID:37230196  
PMID:37401784   PMID:37690690   PMID:37890359  


Genomics

Comparative Map Data
Rtn4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391129,642,898 - 29,694,414 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1129,642,947 - 29,694,331 (+)EnsemblGRCm39 Ensembl
GRCm381129,692,898 - 29,744,414 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1129,692,947 - 29,744,331 (+)EnsemblGRCm38mm10GRCm38
MGSCv371129,592,898 - 29,644,414 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361129,592,947 - 29,642,916 (+)NCBIMGSCv36mm8
Celera1132,055,366 - 32,110,540 (+)NCBICelera
Cytogenetic Map11A3.3NCBI
cM Map1116.79NCBI
RTN4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38254,972,189 - 55,137,831 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl254,972,187 - 55,112,621 (-)EnsemblGRCh38hg38GRCh38
GRCh37255,199,325 - 55,364,967 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36255,052,829 - 55,131,238 (-)NCBINCBI36Build 36hg18NCBI36
Build 34255,110,979 - 55,187,977NCBI
Celera255,039,812 - 55,118,248 (-)NCBICelera
Cytogenetic Map2p16.1NCBI
HuRef254,934,258 - 55,012,692 (-)NCBIHuRef
CHM1_1255,129,380 - 55,207,793 (-)NCBICHM1_1
T2T-CHM13v2.0254,969,379 - 55,135,031 (-)NCBIT2T-CHM13v2.0
Rtn4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814107,651,001 - 107,698,610 (+)NCBIGRCr8
mRatBN7.214103,450,074 - 103,497,687 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl14103,449,930 - 103,497,686 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx14107,788,449 - 107,835,806 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.014109,022,006 - 109,069,463 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.014105,494,428 - 105,541,884 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.014114,126,931 - 114,174,459 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14114,126,943 - 114,174,458 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014113,792,257 - 113,839,936 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414110,725,089 - 110,772,578 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.114110,751,435 - 110,798,925 (+)NCBI
Celera14102,325,054 - 102,372,199 (+)NCBICelera
Cytogenetic Map14q22NCBI
Rtn4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542428,061,346 - 28,125,838 (+)NCBIChiLan1.0ChiLan1.0
RTN4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21271,272,917 - 71,354,172 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A71,277,237 - 71,358,124 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A55,129,272 - 55,207,031 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A56,271,214 - 56,348,117 (-)NCBIpanpan1.1PanPan1.1panPan2
RTN4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11055,884,452 - 55,954,476 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1055,885,125 - 55,936,574 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1055,839,508 - 55,910,109 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01056,886,721 - 56,957,194 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1056,886,724 - 56,957,662 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11056,588,329 - 56,658,758 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01056,866,767 - 56,937,240 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01057,157,709 - 57,228,145 (-)NCBIUU_Cfam_GSD_1.0
Rtn4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629227,097,303 - 27,163,878 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364911,407,414 - 1,474,360 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364911,407,414 - 1,474,031 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RTN4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl386,180,022 - 86,252,126 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1386,180,022 - 86,252,126 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2391,013,117 - 91,202,777 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RTN4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11451,876,697 - 51,955,788 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604559,766,791 - 59,846,774 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rtn4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248336,514,409 - 6,584,061 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rtn4
2183 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2504
Count of miRNA genes:612
Interacting mature miRNAs:762
Transcripts:ENSMUST00000060992, ENSMUST00000078830, ENSMUST00000102841, ENSMUST00000102842, ENSMUST00000102843, ENSMUST00000125735, ENSMUST00000126162, ENSMUST00000141719, ENSMUST00000156217, ENSMUST00000170731
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
10412216Eae44_mexperimental allergic encephalomyelitis susceptibility 44 (mouse)Not determined111226863739950840Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
13524844Ppiq9_mprepulse inhibition QTL 9 (mouse)11904999735077325Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11688027733916219Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111095123244951464Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1301814Bbaa7_mB.burgdorferi-associated arthritis 7 (mouse)Not determined112601178044264695Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111095123244951464Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11901178043011942Mouse
1300607Tnbs2_mtri-nitrobenzene sulfonic acid susceptible 2 (mouse)Not determined112489805235126680Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse

Markers in Region
AA960376  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381129,742,702 - 29,742,880UniSTSGRCm38
MGSCv371129,642,702 - 29,642,880UniSTSGRCm37
Celera1132,108,812 - 32,109,008UniSTS
Cytogenetic Map11A3.3UniSTS
Whitehead/MRC_RH11448.22UniSTS
RH125740  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381129,742,735 - 29,742,877UniSTSGRCm38
MGSCv371129,642,735 - 29,642,877UniSTSGRCm37
Cytogenetic Map11A3.3UniSTS
Whitehead/MRC_RH11448.22UniSTS
RH125900  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381129,696,458 - 29,696,628UniSTSGRCm38
GRCm381129,696,379 - 29,696,628UniSTSGRCm38
MGSCv371129,596,379 - 29,596,628UniSTSGRCm37
MGSCv371129,596,458 - 29,596,628UniSTSGRCm37
Celera1132,058,931 - 32,059,101UniSTS
Celera1132,058,852 - 32,059,101UniSTS
Cytogenetic Map11A3.3UniSTS
Whitehead/MRC_RH11449.51UniSTS
UniSTS:236545  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381129,698,072 - 29,698,151UniSTSGRCm38
MGSCv371129,598,072 - 29,598,151UniSTSGRCm37
Cytogenetic Map11A3.3UniSTS
AB049853  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381129,742,757 - 29,742,880UniSTSGRCm38
MGSCv371129,642,757 - 29,642,880UniSTSGRCm37
Celera1132,108,885 - 32,109,008UniSTS
Cytogenetic Map11A3.3UniSTS
Rtn4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11A3.3UniSTS
cM Map1116.79UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_024226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_194051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_194052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_194053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_194054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB073672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF326337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL929371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY102280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY102281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY102282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY102283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY102284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY102286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY114152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY114153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU698622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU848611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY251875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000060992   ⟹   ENSMUSP00000053754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,668,563 - 29,692,916 (+)Ensembl
GRCm38.p6 Ensembl1129,718,563 - 29,742,916 (+)Ensembl
RefSeq Acc Id: ENSMUST00000078830   ⟹   ENSMUSP00000077875
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,642,947 - 29,694,331 (+)Ensembl
GRCm38.p6 Ensembl1129,692,947 - 29,744,331 (+)Ensembl
RefSeq Acc Id: ENSMUST00000102841   ⟹   ENSMUSP00000099905
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,643,774 - 29,692,916 (+)Ensembl
GRCm38.p6 Ensembl1129,693,774 - 29,742,916 (+)Ensembl
RefSeq Acc Id: ENSMUST00000102842   ⟹   ENSMUSP00000099906
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,642,947 - 29,692,916 (+)Ensembl
GRCm38.p6 Ensembl1129,692,947 - 29,742,916 (+)Ensembl
RefSeq Acc Id: ENSMUST00000102843   ⟹   ENSMUSP00000099907
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,642,947 - 29,692,916 (+)Ensembl
GRCm38.p6 Ensembl1129,692,947 - 29,742,916 (+)Ensembl
RefSeq Acc Id: ENSMUST00000125735
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,686,400 - 29,692,347 (+)Ensembl
GRCm38.p6 Ensembl1129,736,400 - 29,742,347 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126162
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,690,998 - 29,692,285 (+)Ensembl
GRCm38.p6 Ensembl1129,740,998 - 29,742,285 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141719
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,683,773 - 29,692,347 (+)Ensembl
GRCm38.p6 Ensembl1129,733,773 - 29,742,347 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156217
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,683,698 - 29,692,435 (+)Ensembl
GRCm38.p6 Ensembl1129,733,698 - 29,742,435 (+)Ensembl
RefSeq Acc Id: ENSMUST00000170731   ⟹   ENSMUSP00000126413
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1129,642,948 - 29,692,111 (+)Ensembl
GRCm38.p6 Ensembl1129,692,948 - 29,742,111 (+)Ensembl
RefSeq Acc Id: NM_024226   ⟹   NP_077188
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391129,668,563 - 29,694,414 (+)NCBI
GRCm381129,718,563 - 29,744,414 (+)NCBI
MGSCv371129,592,898 - 29,644,414 (+)RGD
Celera1132,055,366 - 32,110,540 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_194051   ⟹   NP_918940
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391129,643,774 - 29,694,414 (+)NCBI
GRCm381129,693,774 - 29,744,414 (+)NCBI
MGSCv371129,592,898 - 29,644,414 (+)RGD
Celera1132,055,366 - 32,110,540 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_194052   ⟹   NP_918941
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391129,642,898 - 29,694,414 (+)NCBI
GRCm381129,692,898 - 29,744,414 (+)ENTREZGENE
MGSCv371129,592,898 - 29,644,414 (+)RGD
Celera1132,055,366 - 32,110,540 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_194053   ⟹   NP_918942
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391129,642,898 - 29,694,414 (+)NCBI
GRCm381129,692,898 - 29,744,414 (+)ENTREZGENE
MGSCv371129,592,898 - 29,644,414 (+)RGD
Celera1132,055,366 - 32,110,540 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_194054   ⟹   NP_918943
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391129,642,898 - 29,694,414 (+)NCBI
GRCm381129,692,898 - 29,744,414 (+)ENTREZGENE
MGSCv371129,592,898 - 29,644,414 (+)RGD
Celera1132,055,366 - 32,110,540 (+)RGD
cM Map11 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_077188 (Get FASTA)   NCBI Sequence Viewer  
  NP_918940 (Get FASTA)   NCBI Sequence Viewer  
  NP_918941 (Get FASTA)   NCBI Sequence Viewer  
  NP_918942 (Get FASTA)   NCBI Sequence Viewer  
  NP_918943 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH32192 (Get FASTA)   NCBI Sequence Viewer  
  AAK08076 (Get FASTA)   NCBI Sequence Viewer  
  AAM73502 (Get FASTA)   NCBI Sequence Viewer  
  AAM73503 (Get FASTA)   NCBI Sequence Viewer  
  AAM73504 (Get FASTA)   NCBI Sequence Viewer  
  AAM73505 (Get FASTA)   NCBI Sequence Viewer  
  AAM73506 (Get FASTA)   NCBI Sequence Viewer  
  AAM73507 (Get FASTA)   NCBI Sequence Viewer  
  AAM73508 (Get FASTA)   NCBI Sequence Viewer  
  AAM73509 (Get FASTA)   NCBI Sequence Viewer  
  AAM73510 (Get FASTA)   NCBI Sequence Viewer  
  AAM73511 (Get FASTA)   NCBI Sequence Viewer  
  AAM77068 (Get FASTA)   NCBI Sequence Viewer  
  AAM77069 (Get FASTA)   NCBI Sequence Viewer  
  BAC75974 (Get FASTA)   NCBI Sequence Viewer  
  BAD90301 (Get FASTA)   NCBI Sequence Viewer  
  EDL23794 (Get FASTA)   NCBI Sequence Viewer  
  EDL23795 (Get FASTA)   NCBI Sequence Viewer  
  EDL23796 (Get FASTA)   NCBI Sequence Viewer  
  EDL23797 (Get FASTA)   NCBI Sequence Viewer  
  EDL23798 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000053754
  ENSMUSP00000053754.5
  ENSMUSP00000077875
  ENSMUSP00000077875.5
  ENSMUSP00000099905
  ENSMUSP00000099905.2
  ENSMUSP00000099906
  ENSMUSP00000099906.4
  ENSMUSP00000099907
  ENSMUSP00000099907.4
  ENSMUSP00000126413.2
GenBank Protein Q99P72 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_918943   ⟸   NM_194054
- Peptide Label: isoform A
- UniProtKB: Q8K3G8 (UniProtKB/Swiss-Prot),   Q8K290 (UniProtKB/Swiss-Prot),   Q8BHF5 (UniProtKB/Swiss-Prot),   Q8BH78 (UniProtKB/Swiss-Prot),   Q8BGM9 (UniProtKB/Swiss-Prot),   Q8BGK7 (UniProtKB/Swiss-Prot),   Q80W95 (UniProtKB/Swiss-Prot),   Q7TNB7 (UniProtKB/Swiss-Prot),   Q78NS1 (UniProtKB/Swiss-Prot),   Q5DTK9 (UniProtKB/Swiss-Prot),   Q9CTE3 (UniProtKB/Swiss-Prot),   Q99P72 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_918942   ⟸   NM_194053
- Peptide Label: isoform B2
- UniProtKB: Q8K3G7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_918941   ⟸   NM_194052
- Peptide Label: isoform B1
- UniProtKB: Q8K3G7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_918940   ⟸   NM_194051
- Peptide Label: isoform D
- UniProtKB: Q99P72 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_077188   ⟸   NM_024226
- Peptide Label: isoform C
- UniProtKB: Q99P72 (UniProtKB/Swiss-Prot),   Q78NS1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000126413   ⟸   ENSMUST00000170731
RefSeq Acc Id: ENSMUSP00000053754   ⟸   ENSMUST00000060992
RefSeq Acc Id: ENSMUSP00000077875   ⟸   ENSMUST00000078830
RefSeq Acc Id: ENSMUSP00000099907   ⟸   ENSMUST00000102843
RefSeq Acc Id: ENSMUSP00000099906   ⟸   ENSMUST00000102842
RefSeq Acc Id: ENSMUSP00000099905   ⟸   ENSMUST00000102841
Protein Domains
Reticulon

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99P72-F1-model_v2 AlphaFold Q99P72 1-1162 view protein structure

Promoters
RGD ID:6822009
Promoter ID:MM_KWN:6800
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_194051,   NM_194052,   NM_194053,   NM_194054
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361129,592,346 - 29,593,847 (+)MPROMDB
RGD ID:6822010
Promoter ID:MM_KWN:6801
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day6,   BoneMarrow_0Hour,   Brain,   Liver,   MEF_B6
Transcripts:NM_024226
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361129,618,359 - 29,618,859 (+)MPROMDB
RGD ID:6822014
Promoter ID:MM_KWN:6802
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:OTTMUST00000011899,   OTTMUST00000011900
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361129,632,746 - 29,633,697 (+)MPROMDB
RGD ID:6822015
Promoter ID:MM_KWN:6803
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   MEF_B6
Transcripts:OTTMUST00000011898
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361129,635,521 - 29,636,197 (+)MPROMDB
RGD ID:6822013
Promoter ID:MM_KWN:6804
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:OTTMUST00000011897
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361129,640,546 - 29,641,297 (+)MPROMDB
RGD ID:8674178
Promoter ID:EPDNEW_M15120
Type:initiation region
Name:Rtn4_1
Description:Mus musculus reticulon 4 , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15121  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381129,692,955 - 29,693,015EPDNEW
RGD ID:8674204
Promoter ID:EPDNEW_M15121
Type:initiation region
Name:Rtn4_2
Description:Mus musculus reticulon 4 , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15120  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381129,718,721 - 29,718,781EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915835 AgrOrtholog
Ensembl Genes ENSMUSG00000020458 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000060992 ENTREZGENE
  ENSMUST00000060992.6 UniProtKB/Swiss-Prot
  ENSMUST00000078830 ENTREZGENE
  ENSMUST00000078830.11 UniProtKB/Swiss-Prot
  ENSMUST00000102841 ENTREZGENE
  ENSMUST00000102841.8 UniProtKB/Swiss-Prot
  ENSMUST00000102842 ENTREZGENE
  ENSMUST00000102842.10 UniProtKB/Swiss-Prot
  ENSMUST00000102843 ENTREZGENE
  ENSMUST00000102843.10 UniProtKB/Swiss-Prot
  ENSMUST00000170731.8 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.2480 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Reticulon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RTN1-4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:68585 UniProtKB/Swiss-Prot
MGD MGI:1915835 ENTREZGENE
NCBI Gene 68585 ENTREZGENE
PANTHER RETICULON-4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RETICULON-LIKE PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Reticulon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rtn4 PhenoGen
PROSITE RETICULON UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt Q5DTK9 ENTREZGENE
  Q78NS1 ENTREZGENE
  Q7TNB7 ENTREZGENE
  Q80W95 ENTREZGENE
  Q8BGK7 ENTREZGENE
  Q8BGM9 ENTREZGENE
  Q8BH78 ENTREZGENE
  Q8BHF5 ENTREZGENE
  Q8K290 ENTREZGENE
  Q8K3G7 ENTREZGENE, UniProtKB/TrEMBL
  Q8K3G8 ENTREZGENE
  Q99P72 ENTREZGENE
  Q9CTE3 ENTREZGENE
  RTN4_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q5DTK9 UniProtKB/Swiss-Prot
  Q78NS1 UniProtKB/Swiss-Prot
  Q7TNB7 UniProtKB/Swiss-Prot
  Q80W95 UniProtKB/Swiss-Prot
  Q8BGK7 UniProtKB/Swiss-Prot
  Q8BGM9 UniProtKB/Swiss-Prot
  Q8BH78 UniProtKB/Swiss-Prot
  Q8BHF5 UniProtKB/Swiss-Prot
  Q8K290 UniProtKB/Swiss-Prot
  Q8K3G8 UniProtKB/Swiss-Prot
  Q9CTE3 UniProtKB/Swiss-Prot