Pbx1 (pre B cell leukemia homeobox 1) - Rat Genome Database

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Gene: Pbx1 (pre B cell leukemia homeobox 1) Mus musculus
Analyze
Symbol: Pbx1
Name: pre B cell leukemia homeobox 1
RGD ID: 1552910
MGI Page MGI
Description: Exhibits DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Is predicted to contribute to RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including animal organ development; positive regulation of G2/M transition of mitotic cell cycle; and regionalization. Localizes to cytoplasm; nucleus; and transcription regulator complex. Is expressed in several structures, including alimentary system; branchial arch; central nervous system; embryo mesenchyme; and genitourinary system. Human ortholog(s) of this gene implicated in B-lymphoblastic leukemia/lymphoma. Orthologous to human PBX1 (PBX homeobox 1).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: 2310056B04Rik; AI848790; AU015730; D230003C07Rik; homeobox protein PBX1; Pbx; Pbx-; Pbx-1; Pbx1a; Pbx1b; pre B-cell leukemia transcription factor 1; pre-B-cell leukemia transcription factor 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391167,946,933 - 168,259,898 (-)NCBIGRCm39mm39
GRCm39 Ensembl1167,946,933 - 168,259,839 (-)Ensembl
GRCm381168,119,364 - 168,432,365 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1168,119,364 - 168,432,270 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,049,495 - 170,362,389 (-)NCBIGRCm37mm9NCBIm37
MGSCv361169,956,674 - 170,268,631 (-)NCBImm8
MGSCv361169,328,392 - 169,641,347 (-)NCBImm8
Celera1170,542,293 - 170,864,365 (-)NCBICelera
Cytogenetic Map1H2.3NCBI
cM Map175.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (EXP,ISO)
acetaldehyde  (EXP)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin B2  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
Aroclor 1254  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (ISO)
butanal  (ISO)
calciol  (EXP)
calcitriol  (ISO)
carbon nanotube  (EXP)
chrysene  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
cyproconazole  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
ethyl methanesulfonate  (ISO)
flusilazole  (EXP)
folic acid  (EXP)
geraniol  (ISO)
hydroquinone  (ISO)
Indeno[1,2,3-cd]pyrene  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
mitoxantrone  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
phenytoin  (ISO)
pirinixic acid  (EXP)
piroxicam  (ISO)
progesterone  (ISO)
propiconazole  (EXP)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
tetraphene  (EXP)
thioacetamide  (ISO)
trimellitic anhydride  (EXP)
valproic acid  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal adrenal gland zona fasciculata morphology  (IAGP)
abnormal axial skeleton morphology  (IAGP)
abnormal clavicle morphology  (IAGP)
abnormal common lymphocyte progenitor cell morphology  (IAGP)
abnormal craniofacial bone morphology  (IAGP)
abnormal definitive hematopoiesis  (IAGP)
abnormal deltoid tuberosity morphology  (IAGP)
abnormal developmental patterning  (IAGP)
abnormal dorsal-ventral axis patterning  (IAGP)
abnormal embryonic growth/weight/body size  (IAGP)
abnormal embryonic tissue morphology  (IAGP)
abnormal gonad rudiment morphology  (IAGP)
abnormal hematopoietic stem cell morphology  (IAGP)
abnormal humerus morphology  (IAGP)
abnormal hyoid bone lesser horn morphology  (IAGP)
abnormal kidney cortex morphology  (IAGP)
abnormal kidney medulla morphology  (IAGP)
abnormal lateral nasal prominence morphology  (IAGP)
abnormal left-right axis symmetry of the somites  (IAGP)
abnormal limb bone morphology  (IAGP)
abnormal limb bud morphology  (IAGP)
abnormal limb morphology  (IAGP)
abnormal liver development  (IAGP)
abnormal lymph node primary follicle morphology  (IAGP)
abnormal malleus morphology  (IAGP)
abnormal maxillary prominence morphology  (IAGP)
abnormal maxillary shelf morphology  (IAGP)
abnormal medial nasal prominence morphology  (IAGP)
abnormal metanephric mesenchyme morphology  (IAGP)
abnormal metanephros morphology  (IAGP)
abnormal middle ear ossicle morphology  (IAGP)
abnormal nasal capsule morphology  (IAGP)
abnormal nephrogenic mesenchyme morphogenesis  (IAGP)
abnormal nephrogenic zone morphology  (IAGP)
abnormal outer ear morphology  (IAGP)
abnormal pancreatic islet morphology  (IAGP)
abnormal pelvic girdle bone morphology  (IAGP)
abnormal proximal-distal axis patterning  (IAGP)
abnormal response/metabolism to endogenous compounds  (IAGP)
abnormal rib morphology  (IAGP)
abnormal scapula morphology  (IAGP)
abnormal second pharyngeal arch morphology  (IAGP)
abnormal spleen mesenchyme morphology  (IAGP)
abnormal spleen morphology  (IAGP)
abnormal styloid process morphology  (IAGP)
abnormal thymus morphology  (IAGP)
abnormal ureteric bud elongation  (IAGP)
abnormal vasculogenesis  (IAGP)
absent adrenal gland  (IAGP)
absent common myeloid progenitor cells  (IAGP)
absent oval window  (IAGP)
absent pancreatic islets  (IAGP)
absent premaxilla  (IAGP)
absent spleen  (IAGP)
absent stapes  (IAGP)
anemia  (IAGP)
cleft palate  (IAGP)
cleft upper lip  (IAGP)
decreased apoptosis  (IAGP)
decreased B cell number  (IAGP)
decreased body size  (IAGP)
decreased bone marrow cell number  (IAGP)
decreased CD4-positive, alpha beta T cell number  (IAGP)
decreased CD8-positive, alpha-beta T cell number  (IAGP)
decreased chondrocyte proliferation  (IAGP)
decreased common myeloid progenitor cell number  (IAGP)
decreased double-negative T cell number  (IAGP)
decreased hematocrit  (IAGP)
decreased hematopoietic stem cell number  (IAGP)
decreased insulin secretion  (IAGP)
decreased mature B cell number  (IAGP)
decreased nephron number  (IAGP)
decreased pre-B cell number  (IAGP)
decreased pro-B cell number  (IAGP)
decreased renal glomerulus number  (IAGP)
decreased T cell number  (IAGP)
delayed kidney development  (IAGP)
diaphragmatic hernia  (IAGP)
disorganized pancreatic islets  (IAGP)
ectopic kidney  (IAGP)
ectopic thymus  (IAGP)
edema  (IAGP)
exocrine pancreas hypoplasia  (IAGP)
hunched posture  (IAGP)
hyperglycemia  (IAGP)
impaired branching involved in ureteric bud morphogenesis  (IAGP)
impaired glucose tolerance  (IAGP)
impaired hematopoiesis  (IAGP)
increased insulin sensitivity  (IAGP)
increased urine glucose level  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
liver hypoplasia  (IAGP)
low mean erythrocyte cell number  (IAGP)
micrognathia  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
outer ear hypoplasia  (IAGP)
palatal shelf hypoplasia  (IAGP)
pallor  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
premature chondrocyte differentiation  (IAGP)
pulmonary hypoplasia  (IAGP)
renal hypoplasia  (IAGP)
rib fusion  (IAGP)
scapular bone hypoplasia  (IAGP)
short ribs  (IAGP)
short styloid process  (IAGP)
single kidney  (IAGP)
skin edema  (IAGP)
small adrenal glands  (IAGP)
small kidney  (IAGP)
small snout  (IAGP)
small spleen  (IAGP)
small thymus  (IAGP)
spleen hypoplasia  (IAGP)
stomach hypoplasia  (IAGP)
thymus hypoplasia  (IAGP)
tongue hypoplasia  (IAGP)
weight loss  (IAGP)
References

Additional References at PubMed
PMID:1301170   PMID:1358808   PMID:1682799   PMID:1967983   PMID:7565694   PMID:7565734   PMID:7913464   PMID:8100142   PMID:8104101   PMID:8661110   PMID:8698039   PMID:8889548  
PMID:9079637   PMID:9310317   PMID:9315626   PMID:9343407   PMID:9367690   PMID:9405651   PMID:9525891   PMID:10026229   PMID:10082572   PMID:10349636   PMID:10381567   PMID:10454582  
PMID:10523646   PMID:10586884   PMID:10654609   PMID:10679934   PMID:10725249   PMID:10842069   PMID:10933814   PMID:10961893   PMID:11010815   PMID:11042159   PMID:11076861   PMID:11118899  
PMID:11217851   PMID:11335119   PMID:11468159   PMID:11566859   PMID:11912494   PMID:11960001   PMID:12183364   PMID:12397630   PMID:12409300   PMID:12412021   PMID:12477932   PMID:12520002  
PMID:12529389   PMID:12591246   PMID:12705858   PMID:12724421   PMID:12923056   PMID:14595835   PMID:14610273   PMID:14764653   PMID:15087118   PMID:15112102   PMID:15138251   PMID:15149596  
PMID:15161102   PMID:15169896   PMID:15238534   PMID:15489334   PMID:15507449   PMID:15581866   PMID:15584907   PMID:15618518   PMID:15634706   PMID:15792957   PMID:15944191   PMID:16141072  
PMID:16141073   PMID:16172981   PMID:16438966   PMID:16515781   PMID:16602821   PMID:16648484   PMID:16672333   PMID:16705164   PMID:16847320   PMID:16919269   PMID:16971476   PMID:17049510  
PMID:17082260   PMID:17178831   PMID:17244677   PMID:17353115   PMID:17623278   PMID:17855428   PMID:17875935   PMID:18093541   PMID:18164701   PMID:18287559   PMID:18321982   PMID:18417536  
PMID:18452912   PMID:18462698   PMID:18560600   PMID:18691704   PMID:18723445   PMID:18787068   PMID:18799693   PMID:18849531   PMID:19030180   PMID:19115252   PMID:19148706   PMID:19164599  
PMID:19247936   PMID:19369396   PMID:19386638   PMID:19767769   PMID:19797217   PMID:19799567   PMID:20059953   PMID:20211142   PMID:20436479   PMID:20439491   PMID:20573694   PMID:20627960  
PMID:21083428   PMID:21262763   PMID:21267068   PMID:21455939   PMID:21471156   PMID:21497760   PMID:21511732   PMID:21597276   PMID:21708033   PMID:21858105   PMID:21873635   PMID:21875655  
PMID:21922607   PMID:21940705   PMID:21982646   PMID:22178153   PMID:22180614   PMID:22315423   PMID:22438573   PMID:22560297   PMID:22745600   PMID:22748019   PMID:22987645   PMID:22988430  
PMID:22992721   PMID:23042297   PMID:23054727   PMID:23471215   PMID:23650387   PMID:23660001   PMID:23863478   PMID:23996689   PMID:24052111   PMID:24064250   PMID:24066094   PMID:24503485  
PMID:24578510   PMID:24591256   PMID:25329411   PMID:25416808   PMID:25803581   PMID:26116661   PMID:26138478   PMID:26238476   PMID:26511275   PMID:26671461   PMID:26705333   PMID:26832413  
PMID:26879466   PMID:26904955   PMID:26930384   PMID:27075259   PMID:27226325   PMID:27287804   PMID:27287812   PMID:27296664   PMID:27329940   PMID:27387666   PMID:27480037   PMID:27568519  
PMID:27621227   PMID:28034988   PMID:28739678   PMID:28800615   PMID:29055695   PMID:29109083   PMID:29251627   PMID:29357412   PMID:29379870   PMID:29437830   PMID:29797482   PMID:29945868  
PMID:30071041   PMID:30112697   PMID:30337366   PMID:30377232   PMID:30853441   PMID:30914971   PMID:31221640   PMID:32001436   PMID:32156750   PMID:32156753   PMID:32169905   PMID:32190943  
PMID:32238574   PMID:32493841   PMID:32857951  


Genomics

Comparative Map Data
Pbx1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391167,946,933 - 168,259,898 (-)NCBIGRCm39mm39
GRCm39 Ensembl1167,946,933 - 168,259,839 (-)Ensembl
GRCm381168,119,364 - 168,432,365 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1168,119,364 - 168,432,270 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,049,495 - 170,362,389 (-)NCBIGRCm37mm9NCBIm37
MGSCv361169,956,674 - 170,268,631 (-)NCBImm8
MGSCv361169,328,392 - 169,641,347 (-)NCBImm8
Celera1170,542,293 - 170,864,365 (-)NCBICelera
Cytogenetic Map1H2.3NCBI
cM Map175.95NCBI
PBX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1164,555,584 - 164,899,296 (+)EnsemblGRCh38hg38GRCh38
GRCh381164,559,184 - 164,886,047 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371164,528,421 - 164,855,284 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361162,795,561 - 163,082,934 (+)NCBINCBI36hg18NCBI36
Build 341161,260,594 - 161,547,967NCBI
Celera1137,634,090 - 137,926,324 (+)NCBI
Cytogenetic Map1q23.3NCBI
HuRef1135,774,690 - 136,068,016 (+)NCBIHuRef
CHM1_11165,951,428 - 166,243,870 (+)NCBICHM1_1
Pbx1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21380,278,766 - 80,588,563 (-)NCBI
Rnor_6.0 Ensembl1386,390,741 - 86,451,002 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01386,390,741 - 86,671,460 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01391,028,026 - 91,307,274 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41383,839,256 - 84,115,516 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11383,853,894 - 84,129,704 (-)NCBI
Celera1380,014,082 - 80,284,838 (-)NCBICelera
Cytogenetic Map13q24NCBI
Pbx1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546211,812,649 - 12,082,316 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546211,777,168 - 12,083,068 (-)NCBIChiLan1.0ChiLan1.0
PBX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11143,778,426 - 144,104,493 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1143,778,701 - 144,104,797 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01139,985,392 - 140,311,845 (+)NCBIMhudiblu_PPA_v0panPan3
PBX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13818,378,997 - 18,703,694 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3818,418,093 - 18,703,497 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3818,435,288 - 18,759,350 (-)NCBI
ROS_Cfam_1.03818,460,019 - 18,784,434 (-)NCBI
UMICH_Zoey_3.13818,431,748 - 18,755,044 (-)NCBI
UNSW_CanFamBas_1.03818,781,894 - 19,105,974 (-)NCBI
UU_Cfam_GSD_1.03819,078,211 - 19,402,654 (-)NCBI
Pbx1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344102,354,727 - 102,593,874 (-)NCBI
SpeTri2.0NW_00493648120,200,236 - 20,440,623 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PBX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl485,824,666 - 86,170,191 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1485,824,590 - 86,170,328 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2493,531,066 - 93,876,673 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PBX1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12563,990,553 - 64,317,901 (-)NCBI
ChlSab1.1 Ensembl2563,989,612 - 64,084,673 (-)Ensembl
Pbx1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248262,944,272 - 3,250,957 (+)NCBI

Position Markers
AI848790  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381168,154,190 - 168,154,292UniSTSGRCm38
MGSCv371170,084,321 - 170,084,423UniSTSGRCm37
Celera1170,576,954 - 170,577,056UniSTS
Cytogenetic Map1H2.3UniSTS
Whitehead/MRC_RH12113.87UniSTS
09.MMHAP76FLC3.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381168,395,459 - 168,395,626UniSTSGRCm38
MGSCv371170,325,590 - 170,325,757UniSTSGRCm37
Celera1170,818,636 - 170,818,803UniSTS
Cytogenetic Map1H2.3UniSTS
Whitehead_YAC1 UniSTS
UniSTS:234263  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381168,154,420 - 168,154,500UniSTSGRCm38
MGSCv371170,084,551 - 170,084,631UniSTSGRCm37
Celera1170,577,184 - 170,577,264UniSTS
Cytogenetic Map1H2.3UniSTS
G49227  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381168,122,267 - 168,122,422UniSTSGRCm38
MGSCv371170,052,398 - 170,052,553UniSTSGRCm37
Celera1170,545,196 - 170,545,352UniSTS
Cytogenetic Map1H2.3UniSTS
AI593012  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381168,419,774 - 168,419,901UniSTSGRCm38
MGSCv371170,349,905 - 170,350,032UniSTSGRCm37
Celera1170,842,572 - 170,842,699UniSTS
Cytogenetic Map1H2.3UniSTS
Whitehead/MRC_RH12100.99UniSTS
Pbx1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1H2.3UniSTS
cM Map188.1UniSTS
AL033591  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381168,350,293 - 168,350,376UniSTSGRCm38
MGSCv371170,280,424 - 170,280,507UniSTSGRCm37
Celera1170,773,498 - 170,773,581UniSTS
Cytogenetic Map1H2.3UniSTS
D1Mit15  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381168,358,674 - 168,358,833UniSTSGRCm38
MGSCv371170,288,805 - 170,288,964UniSTSGRCm37
Celera1170,781,892 - 170,782,051UniSTS
Cytogenetic Map1H2.3UniSTS
cM Map187.9UniSTS
Whitehead Genetic186.3UniSTS
Whitehead_YAC1 UniSTS
AU015730  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381168,155,535 - 168,155,782UniSTSGRCm38
MGSCv371170,085,666 - 170,085,913UniSTSGRCm37
Celera1170,578,300 - 170,578,547UniSTS
Cytogenetic Map1H2.3UniSTS
Whitehead/MRC_RH12113.87UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163815531189571420Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)176000000181500000Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194200000172200000Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1104005680191493284Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112081092168358833Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112081092175641372Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117600000180000000Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128800000181500000Mouse
14746980Manh50_mmandible shape 50 (mouse)1134255813168255813Mouse
1301458Skts8_mskin tumor susceptibility 8 (mouse)Not determined1135919071169919261Mouse
1301408Lore8_mloss of righting induced by ethanol 8 (mouse)Not determined1136002150170002264Mouse
1357434Obsty1_mobesity 1 (mouse)Not determined1136334204170334348Mouse
1300837Vmbic1_mventral midbrain iron content 1 (mouse)Not determined1139624618173624738Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139624618173624738Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139774467173774646Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139774467173774646Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139774467173774646Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139774467173774646Mouse
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139774467173774646Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139774467173774646Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139774467173774646Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139774467173774646Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141267440175267586Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141405603175405702Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141405603175405702Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141405603175405702Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141405603175405702Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142661973176662164Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143457095177457233Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144621573178621573Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144703778178704023Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145250061179250061Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145317638179317756Mouse
1357567Nidd3k_mNidd3 on KK-A<y> (mouse)Not determined7147249520169211344Mouse
12910522Scgq2_mspontaneous crescentic glomerulonephritis QTL 2 (mouse)1147249520171804689Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147249520183092234Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147249520189251027Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147391821181391821Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147391821181391821Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9148047933182048047Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1148047933182048047Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150317922188627115Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150317922188627115Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150317922188627115Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150929168184929353Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151358674185358833Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined152007542186007711Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152211172186211344Mouse
4142119Bpq21_mblood pressure QTL 21 (mouse)Not determined1152211172186211344Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152211172186211344Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152211172186211344Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152211172186211344Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152211172186211344Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152305175186305175Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152305175186305175Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152919071186706423Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153681660175641372Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153848421187848536Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153885284187885284Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154582944188582944Mouse
1301164Tir3c_mtrypansomiasis infection response 3c (mouse)Not determined1154804480188804689Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155175373189175373Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155175373189175373Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155175373189175373Mouse
10054271Nba9_mNew Zealand Black autoimmunity 9 (mouse)Not determined1155698056189699966Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155699229189699330Mouse
4142182Shali5_msurvival time to hyperoxic acute lung injury 5 (mouse)Not determined155706491186261999Mouse
1301932Ssta2_msusceptibility to Salmonella typhimurium antigens 2 (mouse)Not determined1155888654189888802Mouse
1301619Cafq1_mcaffeine metabolism QTL 1 (mouse)Not determined1155888654189888802Mouse
11081167Tir8_mtrypanosome infection response 8 (mouse)1155888654189888802Mouse
1301866Cplaq3_mcircadian period of locomotor activity 3 (mouse)Not determined1155893961189895041Mouse
4141165Bglu3_mblood glucose level 3 (mouse)Not determined156004198190004325Mouse
1301122Cd8mts1_mCD8 T memory cell subset 1 (mouse)Not determined1156004198190004325Mouse
1302132Pbw1_mpentobarbital withdrawal QTL 1 (mouse)Not determined1156004198190004325Mouse
10766456Sle21_msystematic lupus erythematosus susceptibility 21 (mouse)1156004198190004325Mouse
1301232Hcs7_mhepatocarcinogenesis susceptibility 7 (mouse)Not determined1156774467168358833Mouse
13452394Leusq1_mleucocytosis susceptibility QTL 1 (mouse)1156774467168358833Mouse
13452397Leusq4_mleucocytosis susceptibility QTL 4 (mouse)1156774467170976071Mouse
12910521Scgq1_mspontaneous crescentic glomerulonephritis QTL 1 (mouse)1156774467176435127Mouse
1301134Bmd1_mbone mineral density 1 (mouse)Not determined1156774467189571420Mouse
1301189Lmr8_mleishmaniasis resistance 8 (mouse)Not determined1156774467189571420Mouse
1301602Bslm4_mbasal locomotor activity 4 (mouse)Not determined1157628733191628870Mouse
1301216Cbm1_mcerebellum weight 1 (mouse)Not determined1157628733191628870Mouse
1300948Fglu2_mfasting glucose 2 (mouse)Not determined1157628733191628870Mouse
1300745Gvhd1_mgraft-versus-host disease 1 (mouse)Not determined1157628733191628870Mouse
1301565Mnotch_mmodifier of Notch (mouse)Not determined1157628733191628870Mouse
1300732Melm2_mmelanoma modifier 2 (mouse)Not determined1157628733191628870Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157628733191628870Mouse
1300842Sle9_msystematic lupus erythematosus susceptibility 9 (mouse)Not determined1158641251192641372Mouse
1301202Yaa4_mY-linked autoimmune acceleration 4 (mouse)Not determined1158641251192641372Mouse
10402498Lmr20_mleishmaniasis resistance 20 (mouse)Not determined1158641251192641372Mouse
11059556Lmr20b_mleishmaniasis resistance 20b (mouse)1158641251192641372Mouse
11059557Lmr20a_mleishmaniasis resistance 20a (mouse)1158641251192641372Mouse
11059558Lmr20c_mleishmaniasis resistance 20c (mouse)1158641251192641372Mouse
1301431Pcho1_mplasma cholesterol 1 (mouse)Not determined1159435007193435127Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160269591194269591Mouse
12790988Phdlc5_mplasma HDL cholesterol 5 (mouse)9160269591194269591Mouse
1300823Ath9_matherosclerosis 9 (mouse)Not determined1160285202194285317Mouse
1301632Bw8q1_mbody weight at 8 weeks QTL 1 (mouse)Not determined1161373696195373830Mouse
1301596Elnt_mescape latencies during navigation task (mouse)Not determined1162317638194429220Mouse
1301309Emo1_memotionality 1 (mouse)Not determined1163149528186261999Mouse
1300888Berr1_mberghei resistance locus 1 (mouse)Not determined1164315658190802075Mouse
1301339Hdlq15_mHDL QTL 15 (mouse)Not determined1166092111195471971Mouse
4141483Femwf7_mfemur work to failure 7 (mouse)Not determined167730317195471971Mouse
1559024Zit1_mzinc induced tolerance 1 (mouse)Not determined1167730317195471971Mouse
1302158Fembrs5_mfemur breaking strength 5 (mouse)Not determined1167730317195471971Mouse
12792983Liq1_mlimb inflammation QTL 1 (mouse)1167758517191493284Mouse
1301333Mop3_mmorphine preference 3 (mouse)Not determined1167929168189571420Mouse
1301893Cfcd_mcontextual fear conditioning (mouse)Not determined1168000922169211344Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1168222387195471971Mouse
1301130Sle1a_msystematic lupus erythematosus susceptibility 1a (mouse)Not determined1168358674170239759Mouse
1302037Nktcn1_mnatural killer T cell numbers 1 (mouse)Not determined1168358674171804689Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3486
Count of miRNA genes:868
Interacting mature miRNAs:1228
Transcripts:ENSMUST00000064438, ENSMUST00000072863, ENSMUST00000097471, ENSMUST00000176309, ENSMUST00000176482, ENSMUST00000176540, ENSMUST00000176790, ENSMUST00000176791
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001291508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_183355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB221563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC093320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC096625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC112152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC116129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF020196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK140054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY157976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM369110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L27453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LXEJ02005150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000064438   ⟹   ENSMUSP00000066385
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,158,732 - 168,431,504 (-)Ensembl
RefSeq Acc Id: ENSMUST00000072863   ⟹   ENSMUSP00000072640
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,183,573 - 168,432,169 (-)Ensembl
RefSeq Acc Id: ENSMUST00000097471
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,158,370 - 168,164,662 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176482
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,208,343 - 168,431,660 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176540   ⟹   ENSMUSP00000135516
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,153,542 - 168,431,897 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176790   ⟹   ENSMUSP00000134925
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,158,330 - 168,431,750 (-)Ensembl
RefSeq Acc Id: ENSMUST00000176791
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,424,442 - 168,432,169 (-)Ensembl
RefSeq Acc Id: ENSMUST00000188912   ⟹   ENSMUSP00000140606
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1168,119,364 - 168,432,270 (-)Ensembl
RefSeq Acc Id: NM_001291508   ⟹   NP_001278437
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391167,981,096 - 168,259,738 (-)NCBI
GRCm381168,153,527 - 168,432,169 (-)NCBI
Celera1170,542,293 - 170,864,365 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291509   ⟹   NP_001278438
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391167,981,096 - 168,259,738 (-)NCBI
GRCm381168,153,527 - 168,432,169 (-)NCBI
Celera1170,542,293 - 170,864,365 (-)NCBI
Sequence:
RefSeq Acc Id: NM_008783   ⟹   NP_032809
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391167,946,933 - 168,259,738 (-)NCBI
GRCm381168,119,364 - 168,432,169 (-)NCBI
MGSCv371170,049,495 - 170,362,389 (-)RGD
Celera1170,542,293 - 170,864,365 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_183355   ⟹   NP_899198
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391167,981,096 - 168,259,738 (-)NCBI
GRCm381168,153,527 - 168,432,169 (-)NCBI
MGSCv371170,049,495 - 170,362,389 (-)RGD
Celera1170,542,293 - 170,864,365 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006496699   ⟹   XP_006496762
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391167,981,101 - 168,259,898 (-)NCBI
GRCm381168,153,532 - 168,432,365 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006496700   ⟹   XP_006496763
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391167,947,566 - 168,259,898 (-)NCBI
GRCm381168,119,997 - 168,432,365 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_032809   ⟸   NM_008783
- Peptide Label: isoform b
- UniProtKB: P41778 (UniProtKB/Swiss-Prot),   Q71VB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_899198   ⟸   NM_183355
- Peptide Label: isoform a
- UniProtKB: P41778 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006496763   ⟸   XM_006496700
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006496762   ⟸   XM_006496699
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001278438   ⟸   NM_001291509
- Peptide Label: isoform d
- UniProtKB: D9J2V6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001278437   ⟸   NM_001291508
- Peptide Label: isoform b
- UniProtKB: P41778 (UniProtKB/Swiss-Prot),   Q71VB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000072640   ⟸   ENSMUST00000072863
RefSeq Acc Id: ENSMUSP00000140606   ⟸   ENSMUST00000188912
RefSeq Acc Id: ENSMUSP00000066385   ⟸   ENSMUST00000064438
RefSeq Acc Id: ENSMUSP00000134925   ⟸   ENSMUST00000176790
RefSeq Acc Id: ENSMUSP00000135516   ⟸   ENSMUST00000176540
Protein Domains
Homeobox   PBC

Promoters
RGD ID:6875594
Promoter ID:EPDNEW_M1248
Type:initiation region
Name:Pbx1_2
Description:Mus musculus pre B cell leukemia homeobox 1 , transcript variantb, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1249  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381168,431,867 - 168,431,927EPDNEW
RGD ID:6875596
Promoter ID:EPDNEW_M1249
Type:initiation region
Name:Pbx1_1
Description:Mus musculus pre B cell leukemia homeobox 1 , transcript variantb, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1248  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381168,432,150 - 168,432,210EPDNEW
RGD ID:6818218
Promoter ID:MM_KWN:2759
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:ENSMUST00000097471
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,094,684 - 170,095,184 (-)MPROMDB
RGD ID:6818236
Promoter ID:MM_KWN:2762
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000072863,   NM_008783,   NM_183355,   UC007DLF.1,   UC007DLG.1,   UC007DLI.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,362,166 - 170,363,362 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97495 AgrOrtholog
Ensembl Genes ENSMUSG00000052534 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000066385 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000072640 UniProtKB/Swiss-Prot
  ENSMUSP00000134925 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000135516 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000140606 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000064438 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000072863 UniProtKB/Swiss-Prot
  ENSMUST00000176540 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000176790 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000188912 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro Homeobox-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Homeobox_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Homeobox_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PBX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18514 UniProtKB/Swiss-Prot
MGD MGI:97495 ENTREZGENE
NCBI Gene 18514 ENTREZGENE
Pfam Homeodomain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PBC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pbx1 PhenoGen
PROSITE HOMEOBOX_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HOMEOBOX_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46689 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D9J2V6 ENTREZGENE, UniProtKB/TrEMBL
  P41778 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3USV7_MOUSE UniProtKB/TrEMBL
  Q71VB4 ENTREZGENE, UniProtKB/TrEMBL
  Q8BFR8_MOUSE UniProtKB/TrEMBL
  Q99LS8_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-02-07 Pbx1  pre B cell leukemia homeobox 1  Pbx1  pre B-cell leukemia transcription factor 1  Symbol and/or name change 5135510 APPROVED