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Gene: Atg16l1 (autophagy related 16-like 1 (S. cerevisiae)) Mus musculus
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Symbol: Atg16l1
Name: autophagy related 16-like 1 (S. cerevisiae)
Description: Exhibits identical protein binding activity. Involved in macroautophagy; negative stranded viral RNA replication; and positive regulation of autophagy. Localizes to the autophagosome membrane and axoneme. Used to study inflammatory bowel disease 10. Human ortholog(s) of this gene implicated in inflammatory bowel disease 10. Is expressed in central nervous system and retina. Orthologous to human ATG16L1 (autophagy related 16 like 1); PARTICIPATES IN autophagy pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4'-tetrachlorobiphenyl; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1500009K01Rik; AI035639; AI225866; APG16 autophagy 16-like; APG16-like 1; Apg16l; Atg16l; Atg16L1 gamma; autophagy 16-like; autophagy-related 16-like 1 gamma; autophagy-related protein 16-1; WDR30
Orthologs:
Homo sapiens (human) : ATG16L1 (autophagy related 16 like 1)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Atg16l1 (autophagy related 16-like 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg16l1 (autophagy related 16 like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG16L1 (autophagy related 16 like 1)
Canis lupus familiaris (dog) : ATG16L1 (autophagy related 16 like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg16l1 (autophagy related 16 like 1)
Sus scrofa (pig) : ATG16L1 (autophagy related 16 like 1)
more info ...
Related Pseudogenes: Gm18742  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl187,755,870 - 87,792,428 (+)Ensembl
GRCm38187,756,007 - 87,792,428 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37189,652,646 - 89,688,997 (+)NCBIGRCm37mm9NCBIm37
MGSCv36189,587,242 - 89,623,593 (+)NCBImm8
Celera190,713,953 - 90,750,358 (+)NCBICelera
Cytogenetic Map1 DNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
Nomenclature History
 
More on Atg16l1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1553543
Created: 2005-09-30
Species: Mus musculus
Last Modified: 2020-01-07
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.