Ina (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 19 | 47,003,120 - 47,013,766 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 47,003,137 - 47,013,766 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 47,014,681 - 47,025,327 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 47,014,698 - 47,025,327 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 47,089,188 - 47,098,848 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 47,068,013 - 47,077,971 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 47,782,907 - 47,792,585 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | C3 | NCBI | | | | | cM Map | 19 | 39.07 | NCBI | | | | |
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INA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 10 | 103,277,138 - 103,290,346 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 103,277,138 - 103,290,346 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 105,036,895 - 105,050,103 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 105,026,910 - 105,040,093 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 105,026,909 - 105,040,091 | NCBI | | | | | Celera | 10 | 98,776,844 - 98,790,035 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q24.33 | NCBI | | | | | HuRef | 10 | 98,669,249 - 98,682,440 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 105,321,090 - 105,334,278 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 104,165,761 - 104,178,983 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ina (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 255,838,129 - 255,849,680 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 245,896,775 - 245,908,330 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 245,896,775 - 245,908,330 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 254,022,799 - 254,034,348 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 260,716,115 - 260,727,677 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 253,365,639 - 253,377,183 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 266,782,835 - 266,794,389 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 266,781,617 - 266,794,431 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 274,212,015 - 274,224,831 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 252,328,186 - 252,340,997 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 252,592,442 - 252,605,514 (+) | NCBI | | | | | Celera | 1 | 241,668,457 - 241,679,991 (+) | NCBI | | Celera | | | RH 3.4 Map | 1 | 1625.9 | RGD | | | | | Cytogenetic Map | 1 | q54 | NCBI | | | | |
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Ina (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955485 | 7,238,723 - 7,266,995 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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INA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 8 | 115,164,226 - 115,177,505 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 115,169,672 - 115,182,837 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 99,877,665 - 99,890,947 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 103,340,438 - 103,353,888 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 103,340,438 - 103,353,888 (+) | Ensembl | panpan1.1 | | panPan2 | |
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INA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 28 | 15,670,919 - 15,685,080 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 28 | 15,670,999 - 15,683,380 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 15,843,032 - 15,857,216 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 16,146,691 - 16,160,880 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 28 | 16,146,376 - 16,160,876 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 28 | 15,696,438 - 15,710,613 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 15,728,136 - 15,742,330 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 15,862,624 - 15,876,811 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ina (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 31,144,424 - 31,157,296 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936600 | 2,746,772 - 2,760,573 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936600 | 2,747,649 - 2,760,517 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
INA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 114,227,993 - 114,240,558 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 114,227,998 - 114,240,566 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 124,168,530 - 124,181,111 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
INA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 9 | 96,325,122 - 96,338,057 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 96,325,180 - 96,336,358 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 57,437,980 - 57,450,929 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ina (Heterocephalus glaber - naked mole-rat) |
|