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ONTOLOGY REPORT - ANNOTATIONS


Term:macromolecule catabolic process
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Accession:GO:0009057 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
Synonyms:exact_synonym: biopolymer catabolic process;   macromolecule breakdown;   macromolecule catabolism;   macromolecule degradation
 narrow_synonym: multicellular organismal macromolecule catabolic process
 related_synonym: cellular macromolecule catabolic process;   cellular macromolecule catabolism;   cellular macromolecule degradation
 alt_id: GO:0043285;   GO:0044266



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macromolecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln6 ceroid-lipofuscinosis, neuronal 6 acts_upstream_of_or_within IMP (PMID:15647513) MGI PMID:15647513 NCBI chr 9:62,746,067...62,759,288
Ensembl chr 9:62,746,067...62,759,288
JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within IMP (PMID:15647513) MGI PMID:15647513 NCBI chr 8:14,931,335...14,951,720
Ensembl chr 8:14,931,335...14,951,720
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within IMP (PMID:15647513) MGI PMID:15647513 NCBI chr 4:122,729,879...122,752,968
Ensembl chr 4:122,730,035...122,752,968
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:36,996,742...37,185,018
Ensembl chr19:36,998,691...37,186,000
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:62,375,436...62,414,464
Ensembl chr 3:62,375,434...62,414,425
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:36,896,724...36,899,267
Ensembl chr18:36,896,724...36,899,267
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO RGD
MGI
PMID:20805360 GO_REF:0000096 MGI:4417868 RGD:10042974 NCBI chr 5:100,103,794...100,126,926
Ensembl chr 5:100,103,794...100,126,797
JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:57,328,049...57,338,507
Ensembl chr17:57,328,051...57,338,522
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:104,702,144...104,725,935
Ensembl chr 3:104,702,152...104,725,879
JBrowse link
G Plekhn1 pleckstrin homology domain containing, family N member 1 involved_in IDA
IBA
ISO
(MGI:6105829|PMID:27616329) UniProt
GO_Central
MGI
PMID:27616329 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6105829 NCBI chr 4:156,305,913...156,312,999
Ensembl chr 4:156,305,913...156,314,174
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:46,571,664...46,584,575
Ensembl chr13:46,571,910...46,584,571
JBrowse link
G Rc3h1 RING CCCH (C3H) domains 1 involved_in IDA
TAS
(MGI:5706859|PMID:26000482)
(MGI:5751631|PMID:26255671)
UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chr 1:160,733,981...160,802,546
Ensembl chr 1:160,733,988...160,802,548
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:148,696,839...148,711,672
Ensembl chr 4:148,696,839...148,711,476
JBrowse link
G Trim71 tripartite motif-containing 71 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:114,340,336...114,393,437
Ensembl chr 9:114,336,201...114,393,437
JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:70,784,143...70,806,418
Ensembl chr 8:70,784,175...70,805,928
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in TAS
IBA
ISO
IDA
(MGI:5751631|PMID:26255671)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560)
UniProt
GO_Central
MGI
PMID:19322177 PMID:23185455 PMID:26000482 PMID:26134560 PMID:26255671 GO_REF:0000033 GO_REF:0000119 MGI:3842851 MGI:4834177 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631 NCBI chr 4:125,012,207...125,021,674
Ensembl chr 4:125,012,216...125,021,633
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in IDA
IBA
(MGI:5707103|PMID:26134560) UniProt
GO_Central
PMID:26134560 GO_REF:0000033 MGI:5707103 NCBI chr10:7,708,087...7,746,161
Ensembl chr10:7,708,234...7,746,160
JBrowse link
G Zfp36 zinc finger protein 36 involved_in IMP
ISO
IDA
(MGI:5795824|PMID:17288565)
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233)
UniProt
MGI
PMID:17288565 PMID:22701344 PMID:27193233 GO_REF:0000119 MGI:4834177 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chr 7:28,076,208...28,078,680
Ensembl chr 7:28,076,209...28,079,678
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in IDA
ISO
IMP
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784976|PMID:22701344)
(MGI:5779430|PMID:27102483), (MGI:5784968|PMID:24700863)
UniProt
MGI
PMID:20622884 PMID:22701344 PMID:24700863 PMID:24733888 PMID:27102483 GO_REF:0000119 MGI:4818820 MGI:4834177 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chr12:80,154,534...80,159,787
Ensembl chr12:80,154,528...80,159,787
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in IDA
ISO
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344) UniProt
MGI
PMID:20622884 PMID:22701344 GO_REF:0000119 MGI:4818820 MGI:4834177 MGI:5784976 NCBI chr17:84,491,352...84,495,375
Ensembl chr17:84,491,359...84,495,375
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:190,657,305...190,679,160
Ensembl chr 1:190,657,309...190,679,159
JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:55,282,725...55,402,948
Ensembl chr 1:55,287,817...55,402,628
JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:50,586,422...50,600,627
Ensembl chr17:50,586,423...50,600,664
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in IDA
ISO
(MGI:6105829|PMID:27616329) UniProt
MGI
PMID:27616329 GO_REF:0000119 MGI:4834177 MGI:6105829 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:110,060,934...110,209,127
Ensembl chr 4:110,060,919...110,209,106
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in IDA
IBA
(MGI:5306322|PMID:12456657) UniProt
GO_Central
PMID:12456657 GO_REF:0000033 MGI:5306322 NCBI chr13:58,273,693...58,276,370
Ensembl chr13:58,273,693...58,276,370
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:52,310,834...52,341,462
Ensembl chr14:52,310,834...52,341,485
JBrowse link
G Mapkapk2 MAP kinase-activated protein kinase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:130,981,437...131,025,580
Ensembl chr 1:130,981,437...131,025,563
JBrowse link
G Mir466l microRNA 466l acts_upstream_of_or_within IDA (PMID:20410487) MGI PMID:20410487 NCBI chr 2:10,520,908...10,521,028
Ensembl chr 2:10,520,908...10,521,028
JBrowse link
G Myd88 myeloid differentiation primary response gene 88 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO RGD
MGI
PMID:11696543 GO_REF:0000096 MGI:4417868 RGD:10045987 NCBI chr10:79,690,502...79,700,269
Ensembl chr10:79,690,261...79,700,605
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within IDA (PMID:19508861) MGI PMID:19508861 NCBI chr  X:20,483,596...20,517,128
Ensembl chr  X:20,483,742...20,517,140
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:172,863,722...172,876,527
Ensembl chr 2:172,862,291...172,876,527
JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in IDA
ISO
(MGI:6859910|PMID:29844590) UniProt
MGI
PMID:29844590 GO_REF:0000119 MGI:4834177 MGI:6859910 NCBI chr 5:66,173,892...66,309,297
Ensembl chr 5:66,173,892...66,330,461
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:148,696,839...148,711,672
Ensembl chr 4:148,696,839...148,711,476
JBrowse link
G Tirap toll-interleukin 1 receptor (TIR) domain-containing adaptor protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:35,095,687...35,111,587
Ensembl chr 9:35,095,847...35,111,587
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:28,076,208...28,078,680
Ensembl chr 7:28,076,209...28,079,678
JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin prepropeptide involved_in ISO RGD
MGI
PMID:28859281 GO_REF:0000096 MGI:4417868 RGD:13464336 NCBI chr15:89,452,549...89,458,790
Ensembl chr15:89,452,529...89,458,788
JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:128,452,003...128,529,558
Ensembl chr 2:128,452,024...128,529,311
JBrowse link
G Anapc10 anaphase promoting complex subunit 10 involved_in TAS (MGI:5468371|PMID:23328397) UniProt PMID:23328397 MGI:5468371 NCBI chr 8:80,438,366...80,503,950
Ensembl chr 8:80,438,449...80,505,688
JBrowse link
G Anapc11 anaphase promoting complex subunit 11 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:120,489,247...120,499,024
Ensembl chr11:120,489,247...120,499,024
JBrowse link
G Anapc4 anaphase promoting complex subunit 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:52,991,477...53,024,076
Ensembl chr 5:52,991,354...53,025,139
JBrowse link
G Anapc5 anaphase-promoting complex subunit 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:122,925,522...122,960,402
Ensembl chr 5:122,925,522...122,959,402
JBrowse link
G Cdc16 CDC16 cell division cycle 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:13,807,650...13,831,951
Ensembl chr 8:13,807,676...13,831,938
JBrowse link
G Cdc20 cell division cycle 20 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:118,290,098...118,294,540
Ensembl chr 4:118,290,098...118,294,549
JBrowse link
G Cdc20b cell division cycle 20B involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:113,171,514...113,257,553
Ensembl chr13:113,171,645...113,227,729
JBrowse link
G Cdc23 CDC23 cell division cycle 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:34,761,401...34,784,802
Ensembl chr18:34,764,004...34,784,788
JBrowse link
G Cdc26 cell division cycle 26 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:62,310,581...62,326,862
Ensembl chr 4:62,301,891...62,326,879
JBrowse link
G Cdc27 cell division cycle 27 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:104,393,350...104,441,371
Ensembl chr11:104,393,571...104,441,446
JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within ISS (PMID:10500095) MGI PMID:10500095 NCBI chr 1:80,242,640...80,318,426
Ensembl chr 1:80,242,640...80,318,197
JBrowse link
G Ecrg4 ECRG4 augurin precursor acts_upstream_of_or_within
involved_in
IDA
IBA
(PMID:20404145) MGI
GO_Central
PMID:20404145 GO_REF:0000033 NCBI chr 1:43,769,762...43,781,724
Ensembl chr 1:43,769,762...43,781,738
JBrowse link
G Fbxo31 F-box protein 31 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:122,276,182...122,305,607
Ensembl chr 8:122,276,179...122,305,545
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:81,202,713...81,214,204
Ensembl chr10:81,202,056...81,214,350
JBrowse link
G Ube2c ubiquitin-conjugating enzyme E2C involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:164,611,849...164,614,822
Ensembl chr 2:164,611,818...164,620,742
JBrowse link
G Ube2s ubiquitin-conjugating enzyme E2S involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:4,811,013...4,815,339
Ensembl chr 7:4,797,545...4,815,589
JBrowse link
G Ube2srt ubiquitin-conjugating enzyme E2S, retrotransposed involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:56,344,723...56,345,710
Ensembl chr 9:56,344,741...56,345,728
JBrowse link
G Ube2u ubiquitin-conjugating enzyme E2U (putative) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:100,336,064...100,407,342
Ensembl chr 4:100,336,046...100,407,344
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor, alpha subunit involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:149,188,599...149,205,110
Ensembl chr 4:149,188,603...149,205,104
JBrowse link
G Dffb DNA fragmentation factor, beta subunit involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:15572351) RGD
GO_Central
MGI
PMID:11425895 PMID:15572351 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:628524 NCBI chr 4:154,048,904...154,059,578
Ensembl chr 4:154,048,906...154,059,583
JBrowse link
G Dicer1 dicer 1, ribonuclease type III involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211
JBrowse link
G Dnase1l3 deoxyribonuclease 1-like 3 involved_in
acts_upstream_of_or_within
ISO
IBA
IDA
(PMID:12050166) MGI
GO_Central
PMID:12050166 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:14,475,014...14,504,586
Ensembl chr14:14,475,200...14,505,240
JBrowse link
G Dnase2a deoxyribonuclease II alpha involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:85,635,384...85,638,332
Ensembl chr 8:85,635,189...85,649,544
JBrowse link
G Dnase2b deoxyribonuclease II beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:146,275,488...146,322,815
Ensembl chr 3:146,286,740...146,321,351
JBrowse link
G Endog endonuclease G acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:14663139) MGI
GO_Central
PMID:14663139 GO_REF:0000033 NCBI chr 2:30,061,525...30,064,057
Ensembl chr 2:30,061,505...30,064,081
JBrowse link
G Exog exo/endonuclease G involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:119,274,026...119,294,584
Ensembl chr 9:119,274,009...119,294,583
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:98,837,495...98,840,601
Ensembl chr 9:98,837,341...98,840,596
JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (PMID:11403940) MGI PMID:11403940 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136
JBrowse link
CAT tailing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nemf nuclear export mediator factor involved_in IDA
ISO
(MGI:6718911|PMID:33909987) UniProt
MGI
PMID:33909987 GO_REF:0000119 MGI:4834177 MGI:6718911 NCBI chr12:69,358,315...69,403,975
Ensembl chr12:69,357,296...69,403,939
JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:44,144,325...44,240,295
Ensembl chr10:44,144,354...44,240,287
JBrowse link
G Atg7 autophagy related 7 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575
JBrowse link
G Hspa8 heat shock protein 8 involved_in
acts_upstream_of_or_within
ISO PMID:18644871 ParkinsonsUK-UCL
MGI
PMID:18644871 GO_REF:0000008 RGD:10412301 NCBI chr 9:40,712,572...40,716,498
Ensembl chr 9:40,712,280...40,721,383
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in
acts_upstream_of_or_within
IMP
ISO
IGI
(MGI:5805578|PMID:27628032)
(PMID:18579532)
(MGI:3813410|PMID:18644871)
UniProt
MGI
ParkinsonsUK-UCL
PMID:18579532 PMID:18644871 PMID:27628032 GO_REF:0000096 GO_REF:0000119 MGI:3813410 MGI:4417868 MGI:4834177 MGI:5805578 NCBI chr  X:37,488,524...37,545,337
Ensembl chr  X:37,490,234...37,545,331
JBrowse link
G Stub1 STIP1 homology and U-Box containing protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr17:26,049,608...26,051,893
Ensembl chr17:26,049,479...26,052,378
JBrowse link
G Synpo2 synaptopodin 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:122,870,168...123,029,817
Ensembl chr 3:122,870,168...123,029,798
JBrowse link
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chi3l1 chitinase 3 like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:134,109,894...134,117,769
Ensembl chr 1:134,109,914...134,117,919
JBrowse link
G Chia1 chitinase, acidic 1 involved_in IDA
IBA
ISO
(MGI:1931335|PMID:11085997) UniProt
GO_Central
MGI
RGD
PMID:11085997 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:1931335 MGI:4417868 MGI:4834177 RGD:5000759 NCBI chr 3:106,020,698...106,039,434
Ensembl chr 3:106,020,545...106,039,436
JBrowse link
G Chil3 chitinase-like 3 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:106,054,870...106,074,852
Ensembl chr 3:106,054,870...106,074,880
JBrowse link
G Chil4 chitinase-like 4 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:106,108,807...106,126,795
Ensembl chr 3:106,108,806...106,126,823
JBrowse link
G Chil5 chitinase-like 5 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:105,924,235...105,940,262
Ensembl chr 3:105,924,235...105,940,130
JBrowse link
G Chil6 chitinase-like 6 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:106,294,700...106,313,517
Ensembl chr 3:106,294,700...106,313,498
JBrowse link
G Chit1 chitinase 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:134,038,980...134,079,279
Ensembl chr 1:134,038,980...134,079,278
JBrowse link
G Ctbs chitobiase involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:2751306 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2301430 NCBI chr 3:146,156,204...146,171,604
Ensembl chr 3:146,155,550...146,171,604
JBrowse link
G Ovgp1 oviductal glycoprotein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:105,881,118...105,894,739
Ensembl chr 3:105,881,027...105,894,739
JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in ISO (PMID:18285341) MGI PMID:18285341 NCBI chr13:93,908,187...94,079,524
Ensembl chr13:93,908,138...94,079,524
JBrowse link
G Galns galactosamine (N-acetyl)-6-sulfatase involved_in ISO (PMID:18285341) MGI PMID:18285341 NCBI chr 8:123,304,976...123,338,226
Ensembl chr 8:123,304,981...123,338,202
JBrowse link
G Gusb glucuronidase, beta involved_in IMP (PMID:23897660) MGI PMID:23897660 NCBI chr 5:130,011,278...130,031,890
Ensembl chr 5:130,017,852...130,031,890
JBrowse link
G Hexb hexosaminidase B involved_in IMP (PMID:22451654) MGI PMID:22451654 NCBI chr13:97,312,839...97,334,865
Ensembl chr13:97,312,839...97,334,865
JBrowse link
G Hyal1 hyaluronoglucosaminidase 1 involved_in IMP (PMID:22451654) MGI PMID:22451654 NCBI chr 9:107,454,149...107,458,898
Ensembl chr 9:107,454,126...107,458,909
JBrowse link
G Hyal4 hyaluronoglucosaminidase 4 acts_upstream_of_or_within
involved_in
IDA
ISO
(PMID:23086929)
(PMID:19889881)
MGI PMID:19889881 PMID:23086929 NCBI chr 6:24,748,366...24,766,518
Ensembl chr 6:24,748,328...24,767,661
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1, RNA binding involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:102,927,347...102,965,502
Ensembl chr 3:102,927,742...102,965,502
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:153,331,506...153,363,464
Ensembl chr 1:153,331,504...153,363,406
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:100,103,794...100,126,926
Ensembl chr 5:100,103,794...100,126,797
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:178,148,673...178,170,063
Ensembl chr 1:178,148,673...178,165,362
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:95,847,989...95,896,770
Ensembl chr11:95,847,989...95,896,766
JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:21,877,759...21,982,049
Ensembl chr16:21,877,759...21,982,049
JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:49,062,152...49,200,225
Ensembl chr 6:49,062,157...49,191,891
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr15:36,595,902...36,609,825
Ensembl chr15:36,595,905...36,609,912
JBrowse link
G Paip1 polyadenylate binding protein-interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:119,564,960...119,596,858
Ensembl chr13:119,565,137...119,594,754
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:88,331,417...88,364,645
Ensembl chr 9:88,329,062...88,364,627
JBrowse link
G Ybx1 Y box protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:119,134,524...119,153,462
Ensembl chr 4:119,135,178...119,151,801
JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf126 ring finger protein 126 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:79,594,349...79,607,282
Ensembl chr10:79,594,349...79,602,786
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in
acts_upstream_of_or_within
ISO
IMP
IGI
(PMID:18625844) MGI PMID:18625844 GO_REF:0000119 MGI:4834177 NCBI chr 8:40,945,579...40,968,888
Ensembl chr 8:40,945,581...40,968,888
JBrowse link
G Dcp1a decapping mRNA 1A involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:30,201,613...30,249,013
Ensembl chr14:30,201,492...30,249,020
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:119,152,214...119,198,575
Ensembl chr 6:119,152,214...119,198,577
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:44,513,567...44,558,036
Ensembl chr18:44,513,569...44,558,036
JBrowse link
G Dcps decapping enzyme, scavenger involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:35,035,710...35,087,283
Ensembl chr 9:35,035,704...35,087,357
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:26,275,326...26,294,003
Ensembl chr 8:26,275,316...26,294,003
JBrowse link
G Noct nocturnin acts_upstream_of_or_within IGI (PMID:18625844) MGI PMID:18625844 NCBI chr 3:51,131,868...51,159,075
Ensembl chr 3:51,131,868...51,159,065
JBrowse link
G Pan3 PAN3 poly(A) specific ribonuclease subunit acts_upstream_of_or_within IMP (PMID:18625844) MGI PMID:18625844 NCBI chr 5:147,363,018...147,485,310
Ensembl chr 5:147,366,971...147,485,312
JBrowse link
G Patl1 protein associated with topoisomerase II homolog 1 (yeast) involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:11,889,728...11,922,462
Ensembl chr19:11,889,763...11,922,455
JBrowse link
G Patl2 protein associated with topoisomerase II homolog 2 (yeast) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:121,950,589...122,016,670
Ensembl chr 2:121,950,589...122,016,670
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:30,201,613...30,249,013
Ensembl chr14:30,201,492...30,249,020
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:119,152,214...119,198,575
Ensembl chr 6:119,152,214...119,198,577
JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:57,615,823...57,659,782
Ensembl chr 9:57,615,823...57,659,782
JBrowse link
G Edc4 enhancer of mRNA decapping 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:106,607,506...106,619,857
Ensembl chr 8:106,607,513...106,621,540
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in IMP (PMID:24240681) MGI PMID:24240681 NCBI chr13:93,908,187...94,079,524
Ensembl chr13:93,908,138...94,079,524
JBrowse link
G Hexa hexosaminidase A involved_in IGI (PMID:11707436) MGI PMID:11707436 NCBI chr 9:59,446,966...59,472,392
Ensembl chr 9:59,446,823...59,472,392
JBrowse link
G Hexb hexosaminidase B involved_in IGI (PMID:11707436) MGI PMID:11707436 NCBI chr13:97,312,839...97,334,865
Ensembl chr13:97,312,839...97,334,865
JBrowse link
G Ids iduronate 2-sulfatase involved_in IMP (PMID:30064964) MGI PMID:30064964 NCBI chr  X:69,386,675...69,429,437
Ensembl chr  X:69,386,675...69,408,690
JBrowse link
G Idua iduronidase, alpha-L involved_in
acts_upstream_of_or_within
ISO
IMP
IDA
(PMID:19751987)
(PMID:25854773)
(PMID:19834056)
MGI PMID:19751987 PMID:19834056 PMID:25854773 GO_REF:0000119 MGI:4834177 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
dextrin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgam maltase-glucoamylase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:40,605,765...40,746,057
Ensembl chr 6:40,605,765...40,746,057
JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endonuclease 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:51,162,406...51,164,645
Ensembl chr14:51,162,425...51,164,596
JBrowse link
G Dffb DNA fragmentation factor, beta subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:154,048,904...154,059,578
Ensembl chr 4:154,048,906...154,059,583
JBrowse link
G Dnase1 deoxyribonuclease I involved_in IDA
IBA
(MGI:6094744|PMID:29191910) UniProt
GO_Central
PMID:29191910 GO_REF:0000033 MGI:6094744 NCBI chr16:3,855,007...3,857,888
Ensembl chr16:3,854,806...3,857,888
JBrowse link
G Dnase1l1 deoxyribonuclease 1-like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:73,316,823...73,325,939
Ensembl chr  X:73,316,823...73,325,943
JBrowse link
G Dnase1l2 deoxyribonuclease 1-like 2 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:21307874) GO_Central
MGI
PMID:21307874 GO_REF:0000033 NCBI chr17:24,659,054...24,662,075
Ensembl chr17:24,659,055...24,662,079
JBrowse link
G Dnase1l3 deoxyribonuclease 1-like 3 involved_in IDA (MGI:6094744|PMID:29191910) UniProt PMID:29191910 MGI:6094744 NCBI chr14:14,475,014...14,504,586
Ensembl chr14:14,475,200...14,505,240
JBrowse link
G Dnase2a deoxyribonuclease II alpha acts_upstream_of_or_within IMP (PMID:15568025), (PMID:18991290) MGI PMID:15568025 PMID:18991290 NCBI chr 8:85,635,384...85,638,332
Ensembl chr 8:85,635,189...85,649,544
JBrowse link
G Endog endonuclease G involved_in TAS (MGI:5306292|PMID:18309324) UniProt PMID:18309324 MGI:5306292 NCBI chr 2:30,061,525...30,064,057
Ensembl chr 2:30,061,505...30,064,081
JBrowse link
G Fbh1 F-box DNA helicase 1 acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 2:11,747,384...11,782,396
Ensembl chr 2:11,747,384...11,782,393
JBrowse link
G Isg20 interferon-stimulated protein involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:78,561,136...78,570,144
Ensembl chr 7:78,563,172...78,570,144
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr19:5,532,589...5,538,461
Ensembl chr19:5,532,373...5,538,430
JBrowse link
G Rexo4 REX4, 3'-5' exonuclease involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:26,843,575...26,854,398
Ensembl chr 2:26,843,575...26,854,398
JBrowse link
G Setmar SET domain without mariner transposase fusion involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:108,042,006...108,054,088
Ensembl chr 6:108,042,006...108,054,083
JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IBA
IDA
IMP
(PMID:20871604)
(PMID:25848017)
(PMID:18724932), (PMID:19923437), (PMID:23993650)
GO_Central
MGI
PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 GO_REF:0000033 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802
JBrowse link
G Trex2 three prime repair exonuclease 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:72,477,311...72,478,949
Ensembl chr  X:72,477,311...72,478,950
JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dna2 DNA replication helicase/nuclease 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:62,782,762...62,809,967
Ensembl chr10:62,782,805...62,809,964
JBrowse link
G Fen1 flap structure specific endonuclease 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:10,176,496...10,181,757
Ensembl chr19:10,176,496...10,181,533
JBrowse link
G Rnaseh1 ribonuclease H1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:28,699,600...28,709,591
Ensembl chr12:28,699,601...28,709,588
JBrowse link
G Rnaseh2a ribonuclease H2, large subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:85,683,239...85,694,498
Ensembl chr 8:85,683,239...85,696,396
JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela1 chymotrypsin-like elastase family, member 1 acts_upstream_of_or_within IMP (PMID:24793170) MGI PMID:24793170 NCBI chr15:100,572,303...100,585,801
Ensembl chr15:100,572,302...100,585,802
JBrowse link
G Ctsl cathepsin L involved_in IMP (MGI:6259330|PMID:12417635) UniProt PMID:12417635 MGI:6259330 NCBI chr13:64,509,704...64,518,586
Ensembl chr13:64,507,151...64,518,704
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:7,344,397...7,360,461
Ensembl chr 9:7,344,381...7,369,499
JBrowse link
epidermal growth factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7 RAB7, member RAS oncogene family involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:87,976,088...88,022,252
Ensembl chr 6:87,976,088...88,022,252
JBrowse link
G Snx5 sorting nexin 5 involved_in ISO RGD
MGI
PMID:16487940 GO_REF:0000096 MGI:4417868 RGD:13508623 NCBI chr 2:144,092,043...144,112,713
Ensembl chr 2:144,092,043...144,112,826
JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:94,698,216...94,739,301
Ensembl chr 8:94,698,216...94,739,470
JBrowse link
G Ankzf1 ankyrin repeat and zinc finger domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:75,168,794...75,176,031
Ensembl chr 1:75,168,795...75,176,031
JBrowse link
G Aup1 ancient ubiquitous protein 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:83,031,483...83,034,663
Ensembl chr 6:83,031,502...83,034,789
JBrowse link
G Bag6 BCL2-associated athanogene 6 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:35,354,132...35,366,297
Ensembl chr17:35,354,154...35,366,298
JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:141,503,488...141,557,981
Ensembl chr 7:141,503,488...141,557,984
JBrowse link
G Calr calreticulin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:85,568,717...85,573,560
Ensembl chr 8:85,568,479...85,573,563
JBrowse link
G Calr3 calreticulin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:73,178,020...73,197,638
Ensembl chr 8:73,178,020...73,197,714
JBrowse link
G Calr4 calreticulin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:109,075,610...109,112,176
Ensembl chr 4:109,091,682...109,111,768
JBrowse link
G Canx calnexin involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:50,184,784...50,216,500
Ensembl chr11:50,184,788...50,216,500
JBrowse link
G Ccdc47 coiled-coil domain containing 47 involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:25009997) MGI PMID:25009997 GO_REF:0000119 MGI:4834177 NCBI chr11:106,090,086...106,107,349
Ensembl chr11:106,088,234...106,107,170
JBrowse link
G Clgn calmegin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:84,116,454...84,155,181
Ensembl chr 8:84,116,496...84,155,181
JBrowse link
G Derl1 Der1-like domain family, member 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:57,732,898...57,755,814
Ensembl chr15:57,732,898...57,755,844
JBrowse link
G Derl2 Der1-like domain family, member 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:70,898,266...70,910,667
Ensembl chr11:70,897,990...70,910,667
JBrowse link
G Derl3 Der1-like domain family, member 3 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:75,729,232...75,731,775
Ensembl chr10:75,729,247...75,731,775
JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:59,715,405...59,735,118
Ensembl chr10:59,715,378...59,735,124
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:75,213,039...75,222,336
Ensembl chr 1:75,213,050...75,222,336
JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in IDA
IBA
ISO
(MGI:5499714|PMID:22267725) UniProt
GO_Central
MGI
PMID:22267725 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5499714 NCBI chr12:44,252,680...44,256,851
Ensembl chr12:44,252,342...44,257,109
JBrowse link
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 involved_in IDA
ISO
(MGI:4943381|PMID:18653895), (MGI:4947480|PMID:21329881) UniProt
MGI
PMID:18653895 PMID:21329881 GO_REF:0000119 MGI:4834177 MGI:4943381 MGI:4947480 NCBI chr 2:80,145,790...80,184,399
Ensembl chr 2:80,145,810...80,184,387
JBrowse link
G Ecpas Ecm29 proteasome adaptor and scaffold involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:58,797,234...58,917,748
Ensembl chr 4:58,798,911...58,912,749
JBrowse link
G Edem1 ER degradation enhancer, mannosidase alpha-like 1 involved_in
acts_upstream_of_or_within
ISO
IDA
(PMID:11375934) MGI PMID:11375934 GO_REF:0000119 MGI:4834177 NCBI chr 6:108,800,984...108,836,317
Ensembl chr 6:108,805,602...108,836,317
JBrowse link
G Edem2 ER degradation enhancer, mannosidase alpha-like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:155,543,593...155,571,395
Ensembl chr 2:155,543,597...155,571,395
JBrowse link
G Edem3 ER degradation enhancer, mannosidase alpha-like 3 involved_in IDA
ISO
(MGI:3654428|PMID:16431915) ParkinsonsUK-UCL
MGI
PMID:16431915 GO_REF:0000119 MGI:3654428 MGI:4834177 NCBI chr 1:151,631,099...151,698,079
Ensembl chr 1:151,631,122...151,697,802
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IMP (MGI:6467680|PMID:17707796) UniProt PMID:17707796 MGI:6467680 NCBI chr 6:70,821,468...70,882,225
Ensembl chr 6:70,821,499...70,882,229
JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:30,812,794...30,904,385
Ensembl chr11:30,880,774...30,904,335
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:44,023,382...44,058,580
Ensembl chr19:44,023,383...44,058,224
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:27,513,399...27,529,465
Ensembl chr 8:27,513,289...27,530,356
JBrowse link
G Faf1 Fas-associated factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:109,533,873...109,821,157
Ensembl chr 4:109,533,785...109,821,157
JBrowse link
G Faf2 Fas associated factor family member 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:54,769,597...54,811,876
Ensembl chr13:54,769,597...54,811,876
JBrowse link
G Fbxo17 F-box protein 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:28,416,176...28,437,570
Ensembl chr 7:28,416,229...28,437,569
JBrowse link
G Fbxo2 F-box protein 2 involved_in
acts_upstream_of_or_within
IBA
IDA
(PMID:15723043) GO_Central
MGI
PMID:15723043 GO_REF:0000033 NCBI chr 4:148,244,605...148,250,874
Ensembl chr 4:148,245,078...148,250,881
JBrowse link
G Fbxo27 F-box protein 27 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:28,392,205...28,398,763
Ensembl chr 7:28,392,274...28,398,763
JBrowse link
G Fbxo44 F-box protein 44 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:148,237,256...148,244,663
Ensembl chr 4:148,237,257...148,244,939
JBrowse link
G Fbxo6 F-box protein 6 involved_in IDA
IBA
IMP
(MGI:5644019|PMID:21062743)
(MGI:2679753|PMID:12939278)
ParkinsonsUK-UCL
GO_Central
UniProt
PMID:12939278 PMID:21062743 GO_REF:0000033 MGI:2679753 MGI:5644019 NCBI chr 4:148,230,173...148,236,592
Ensembl chr 4:148,230,173...148,236,597
JBrowse link
G Foxred2 FAD-dependent oxidoreductase domain containing 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:77,824,722...77,842,701
Ensembl chr15:77,824,722...77,840,922
JBrowse link
G Get4 golgi to ER traffic protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:139,237,303...139,255,806
Ensembl chr 5:139,238,079...139,255,806
JBrowse link
G Herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:95,113,057...95,121,999
Ensembl chr 8:95,113,066...95,122,005
JBrowse link
G Hsp90b1 heat shock protein 90, beta (Grp94), member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:86,526,705...86,541,308
Ensembl chr10:86,526,073...86,541,373
JBrowse link
G Hspa5 heat shock protein 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:34,662,102...34,666,541
Ensembl chr 2:34,661,982...34,667,559
JBrowse link
G Jkamp JNK1/MAPK8-associated membrane protein involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr12:72,132,348...72,148,301
Ensembl chr12:72,132,363...72,148,235
JBrowse link
G Jkampl JNK1/MAPK8 associated membrane protein like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:73,445,563...73,446,621
Ensembl chr 6:73,445,564...73,446,650
JBrowse link
G Man1a mannosidase 1, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:53,780,881...53,952,712
Ensembl chr10:53,780,881...53,952,705
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:15294975) MGI PMID:15294975 GO_REF:0000119 MGI:4834177 NCBI chr 2:25,222,742...25,242,225
Ensembl chr 2:25,222,350...25,242,224
JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:31,456,045...31,531,172
Ensembl chr15:31,456,037...31,531,199
JBrowse link
G Nccrp1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:28,243,017...28,247,168
Ensembl chr 7:28,243,021...28,246,679
JBrowse link
G Nrros negative regulator of reactive oxygen species involved_in TAS (MGI:5568138|PMID:24739962) UniProt PMID:24739962 MGI:5568138 NCBI chr16:31,961,603...31,984,412
Ensembl chr16:31,961,603...31,984,412
JBrowse link
G Os9 amplified in osteosarcoma involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:126,928,880...126,957,029
Ensembl chr10:126,931,519...126,957,000
JBrowse link
G Psmc6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:45,567,285...45,587,150
Ensembl chr14:45,567,245...45,587,162
JBrowse link
G Rcn3 reticulocalbin 3, EF-hand calcium binding domain involved_in IMP (MGI:6201885|PMID:26252542) UniProt PMID:26252542 MGI:6201885 NCBI chr 7:44,732,338...44,741,746
Ensembl chr 7:44,732,337...44,741,645
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in IDA (MGI:5437551|PMID:22795130) UniProt PMID:22795130 MGI:5437551 NCBI chr 1:82,294,178...82,423,087
Ensembl chr 1:82,294,173...82,423,087
JBrowse link
G Rnf103 ring finger protein 103 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:71,470,828...71,487,864
Ensembl chr 6:71,470,878...71,487,865
JBrowse link
G Rnf121 ring finger protein 121 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:101,668,344...101,721,712
Ensembl chr 7:101,668,344...101,714,676
JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:58,760,975...58,774,239
Ensembl chr15:58,761,078...58,778,906
JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:3,365,973...3,402,956
Ensembl chr11:3,365,982...3,402,363
JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:34,820,073...34,822,535
Ensembl chr17:34,820,065...34,822,664
JBrowse link
G Sdf2l1 stromal cell-derived factor 2-like 1 acts_upstream_of_or_within ISO (PMID:23444373) MGI PMID:23444373 NCBI chr16:16,948,002...16,950,247
Ensembl chr16:16,948,002...16,950,247
JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:47,474,661...47,483,233
Ensembl chr 4:47,474,658...47,483,242
JBrowse link
G Sec61bl SEC61 translocon subunit beta like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:98,625,867...98,626,349
Ensembl chr13:98,626,041...98,626,350
JBrowse link
G Sel1l sel-1 suppressor of lin-12-like (C. elegans) involved_in IMP
IBA
ISO
(MGI:5606246|PMID:25066055) UniProt
GO_Central
MGI
PMID:25066055 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5606246 NCBI chr12:91,772,817...91,815,931
Ensembl chr12:91,772,817...91,815,931
JBrowse link
G Sel1l2 sel-1 suppressor of lin-12-like 2 (C. elegans) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:140,071,519...140,231,644
Ensembl chr 2:140,071,775...140,231,626
JBrowse link
G Selenos selenoprotein S involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:65,729,397...65,739,153
Ensembl chr 7:65,729,397...65,739,153
JBrowse link
G Sgta small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,879,905...80,896,105
Ensembl chr10:80,879,909...80,896,015
JBrowse link
G Stt3b STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:115,071,538...115,139,536
Ensembl chr 9:115,071,649...115,139,489
JBrowse link
G Stub1 STIP1 homology and U-Box containing protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:26,049,608...26,051,893
Ensembl chr17:26,049,479...26,052,378
JBrowse link
G Syvn1 synovial apoptosis inhibitor 1, synoviolin involved_in
acts_upstream_of_or_within
IDA
IBA
ISO
(MGI:5645202|PMID:21454652) ParkinsonsUK-UCL
GO_Central
MGI
PMID:21454652 GO_REF:0000008 GO_REF:0000033 MGI:5645202 NCBI chr19:6,096,586...6,103,748
Ensembl chr19:6,096,606...6,103,742
JBrowse link
G Tmem129 transmembrane protein 129 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:33,810,560...33,815,321
Ensembl chr 5:33,810,560...33,815,760
JBrowse link
G Tmem67 transmembrane protein 67 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:12,039,355...12,090,020
Ensembl chr 4:12,039,355...12,090,020
JBrowse link
G Tmub1 transmembrane and ubiquitin-like domain containing 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:24,650,461...24,652,859
Ensembl chr 5:24,650,456...24,652,852
JBrowse link
G Tmub2 transmembrane and ubiquitin-like domain containing 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,175,777...102,180,253
Ensembl chr11:102,175,757...102,180,063
JBrowse link
G Tor1a torsin family 1, member A (torsin A) involved_in IDA (MGI:3712415|PMID:17200151) UniProt PMID:17200151 MGI:3712415 NCBI chr 2:30,850,573...30,857,930
Ensembl chr 2:30,850,639...30,857,945
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:61,835,675...61,847,736
Ensembl chr14:61,835,696...61,843,395
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:88,890,194...88,911,119
Ensembl chr11:88,890,202...88,911,119
JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 involved_in
acts_upstream_of_or_within
ISO
IBA
IDA
(PMID:11278356) MGI
GO_Central
PMID:11278356 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:77,458,155...77,481,824
Ensembl chr10:77,458,109...77,481,827
JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2J 1 acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(PMID:24020373) MGI
GO_Central
PMID:24020373 GO_REF:0000008 GO_REF:0000033 NCBI chr 4:33,031,380...33,052,367
Ensembl chr 4:33,031,416...33,052,363
JBrowse link
G Ube2j2 ubiquitin-conjugating enzyme E2J 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:156,028,270...156,044,061
Ensembl chr 4:156,028,288...156,044,061
JBrowse link
G Ube4a ubiquitination factor E4A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:44,834,425...44,877,021
Ensembl chr 9:44,834,425...44,876,898
JBrowse link
G Ube4b ubiquitination factor E4B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:149,412,873...149,512,618
Ensembl chr 4:149,412,873...149,511,206
JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:58,323,970...58,363,467
Ensembl chr13:58,323,970...58,363,467
JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:152,281,228...152,284,558
Ensembl chr  X:152,281,223...152,284,566
JBrowse link
G Ubxn10 UBX domain protein 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:138,437,148...138,465,749
Ensembl chr 4:138,437,148...138,464,478
JBrowse link
G Ubxn4 UBX domain protein 4 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:128,171,635...128,207,115
Ensembl chr 1:128,171,701...128,207,115
JBrowse link
G Ubxn6 UBX domain protein 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:56,374,045...56,386,333
Ensembl chr17:56,374,045...56,382,028
JBrowse link
G Ubxn8 UBX domain protein 8 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:34,109,614...34,135,515
Ensembl chr 8:34,109,614...34,131,995
JBrowse link
G Ufd1 ubiquitin recognition factor in ER-associated degradation 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:18,630,486...18,654,011
Ensembl chr16:18,630,529...18,654,011
JBrowse link
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:36,179,109...36,283,407
Ensembl chr 1:36,179,108...36,283,801
JBrowse link
G Uggt2 UDP-glucose glycoprotein glucosyltransferase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:119,219,177...119,337,208
Ensembl chr14:119,222,451...119,336,842
JBrowse link
G Umod uromodulin acts_upstream_of_or_within IMP (PMID:28437467) MGI PMID:28437467 NCBI chr 7:119,061,931...119,078,485
Ensembl chr 7:119,061,934...119,078,505
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:108,367,806...108,379,536
Ensembl chr 9:108,367,801...108,379,536
JBrowse link
G Vcp valosin containing protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:42,979,964...43,000,507
Ensembl chr 4:42,979,963...43,000,507
JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in IMP
ISO
(MGI:5009360|PMID:20160352) ParkinsonsUK-UCL
MGI
PMID:20160352 GO_REF:0000119 MGI:4834177 MGI:5009360 NCBI chr 5:37,123,448...37,146,326
Ensembl chr 5:37,123,448...37,146,549
JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:130,645,064...130,652,093
Ensembl chr 1:130,645,064...130,652,095
JBrowse link
G protein-coupled receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn2 beclin 2 involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:23954414) MGI PMID:23954414 GO_REF:0000119 MGI:4834177 NCBI chr 1:175,747,895...175,749,791
Ensembl chr 1:175,747,895...175,749,791
JBrowse link
G Gprasp1 G protein-coupled receptor associated sorting protein 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23954414) MGI PMID:23954414 GO_REF:0000119 MGI:4834177 NCBI chr  X:134,643,441...134,704,217
Ensembl chr  X:134,643,482...134,704,223
JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenergic receptor, alpha 1b acts_upstream_of IMP (PMID:14581480) MGI PMID:14581480 NCBI chr11:43,665,432...43,792,076
Ensembl chr11:43,665,433...43,792,037
JBrowse link
G Adrb1 adrenergic receptor, beta 1 involved_in ISO RGD
MGI
PMID:17911346 GO_REF:0000096 MGI:4417868 RGD:5129142 NCBI chr19:56,710,549...56,713,582
Ensembl chr19:56,710,631...56,721,545
JBrowse link
G Agl amylo-1,6-glucosidase, 4-alpha-glucanotransferase involved_in ISO
IMP
IBA
(PMID:25092169)
(PMID:24613482)
RGD
MGI
GO_Central
PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 PMID:24613482 More... GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chr 3:116,533,648...116,601,815
Ensembl chr 3:116,533,648...116,601,815
JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within IMP (PMID:10625614) MGI PMID:10625614 NCBI chr11:101,258,542...101,268,729
Ensembl chr11:101,258,387...101,268,729
JBrowse link
G Gaa glucosidase, alpha, acid acts_upstream_of_or_within
involved_in
ISO
IMP
IBA
(PMID:11785984)
(PMID:11328962)
(PMID:10838256)
RGD
MGI
GO_Central
PMID:2193931 PMID:8710802 PMID:10838256 PMID:11328962 PMID:11785984 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1599504 RGD:1599506 NCBI chr11:119,158,789...119,176,284
Ensembl chr11:119,158,713...119,176,280
JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of IMP (PMID:10391216) MGI PMID:10391216 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299
JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within IMP (PMID:19696889) MGI PMID:19696889 NCBI chr15:97,990,470...98,030,328
Ensembl chr15:97,990,470...98,030,332
JBrowse link
G Pgm1 phosphoglucomutase 1 involved_in ISO (PMID:28882528) MGI PMID:28882528 NCBI chr 4:99,786,648...99,844,491
Ensembl chr 4:99,786,611...99,844,491
JBrowse link
G Pgm2 phosphoglucomutase 2 involved_in IMP (PMID:927504) MGI PMID:927504 NCBI chr 5:64,250,258...64,285,698
Ensembl chr 5:64,250,293...64,285,694
JBrowse link
G Phkg1 phosphorylase kinase gamma 1 involved_in ISO (PMID:25340394) MGI PMID:25340394 NCBI chr 5:129,892,272...129,907,953
Ensembl chr 5:129,892,262...129,927,390
JBrowse link
G Phkg2 phosphorylase kinase, gamma 2 (testis) involved_in IMP (PMID:34083142) MGI PMID:34083142 NCBI chr 7:127,169,252...127,182,479
Ensembl chr 7:127,172,512...127,182,479
JBrowse link
G Pygb brain glycogen phosphorylase involved_in ISO
IDA
IBA
(PMID:32446205) RGD
MGI
GO_Central
PMID:10634496 PMID:11071367 PMID:16226229 PMID:32446205 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr 2:150,628,716...150,673,668
Ensembl chr 2:150,628,655...150,673,678
JBrowse link
G Pygl liver glycogen phosphorylase involved_in ISO
IBA
IMP
(PMID:31701076) RGD
GO_Central
MGI
PMID:114169 PMID:6449198 PMID:15152027 PMID:31701076 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr12:70,237,589...70,274,457
Ensembl chr12:70,237,585...70,278,262
JBrowse link
G Pygm muscle glycogen phosphorylase involved_in
acts_upstream_of_or_within
ISO
IBA
IMP
IDA
(PMID:31511858)
(PMID:17689562)
(PMID:15282316), (PMID:17689562)
RGD
GO_Central
MGI
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 More... GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr19:6,434,438...6,448,494
Ensembl chr19:6,434,429...6,448,489
JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:92,750,910...92,754,438
Ensembl chr 5:92,750,900...92,754,438
JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within IMP (PMID:19696889) MGI PMID:19696889 NCBI chr15:97,990,470...98,030,328
Ensembl chr15:97,990,470...98,030,332
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:46,865,484...46,874,683
Ensembl chr18:46,863,211...46,874,647
JBrowse link
G Atg2a autophagy related 2A involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:6,291,508...6,312,332
Ensembl chr19:6,291,698...6,312,365
JBrowse link
G Atg2b autophagy related 2B involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:105,579,798...105,651,554
Ensembl chr12:105,582,395...105,651,470
JBrowse link
G Atg3 autophagy related 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:44,979,192...45,008,901
Ensembl chr16:44,979,148...45,008,901
JBrowse link
G Gaa glucosidase, alpha, acid involved_in IMP
ISO
(PMID:12739885)
(PMID:24417)
MGI PMID:24417 PMID:12739885 NCBI chr11:119,158,789...119,176,284
Ensembl chr11:119,158,713...119,176,280
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IMP (PMID:20810658) MGI PMID:20810658 NCBI chr 6:129,510,155...129,519,294
Ensembl chr 6:129,510,123...129,519,309
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:6,284,858...6,346,599
Ensembl chr 1:6,276,421...6,346,872
JBrowse link
G Stbd1 starch binding domain 1 involved_in
acts_upstream_of_or_within
ISO
IMP
IC
(PMID:20810658)
(MGI:7261139|PMID:20810658)
MGI
GOC
PMID:20810658 GO_REF:0000119 MGI:4834177 MGI:7261139 NCBI chr 5:92,750,910...92,754,438
Ensembl chr 5:92,750,900...92,754,438
JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:7,588,212...7,594,439
Ensembl chr  X:7,580,572...7,594,445
JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:121,218,029...121,246,393
Ensembl chr11:121,218,050...121,245,271
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:109,464,347...109,502,215
Ensembl chr11:109,464,157...109,502,793
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:142,615,269...142,655,427
Ensembl chr 5:142,613,453...142,656,343
JBrowse link
glycoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem3 ER degradation enhancer, mannosidase alpha-like 3 acts_upstream_of_or_within IDA (PMID:16431915) MGI PMID:16431915 NCBI chr 1:151,631,099...151,698,079
Ensembl chr 1:151,631,122...151,697,802
JBrowse link
G Fbxo17 F-box protein 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:28,416,176...28,437,570
Ensembl chr 7:28,416,229...28,437,569
JBrowse link
G Fbxo2 F-box protein 2 involved_in
acts_upstream_of_or_within
IDA
IBA
(MGI:4821082|PMID:12140560)
(PMID:15723043)
UniProt
MGI
GO_Central
PMID:12140560 PMID:15723043 GO_REF:0000033 MGI:4821082 NCBI chr 4:148,244,605...148,250,874
Ensembl chr 4:148,245,078...148,250,881
JBrowse link
G Fbxo27 F-box protein 27 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:28,392,205...28,398,763
Ensembl chr 7:28,392,274...28,398,763
JBrowse link
G Fbxo44 F-box protein 44 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:148,237,256...148,244,663
Ensembl chr 4:148,237,257...148,244,939
JBrowse link
G Fbxo6 F-box protein 6 acts_upstream_of_or_within
involved_in
IDA
IBA
(PMID:15723043) MGI
GO_Central
PMID:15723043 GO_REF:0000033 NCBI chr 4:148,230,173...148,236,592
Ensembl chr 4:148,230,173...148,236,597
JBrowse link
G Manba mannosidase, beta A, lysosomal involved_in
acts_upstream_of_or_within
IDA
IBA
(MGI:3615066|PMID:16377659)
(PMID:3447593)
UniProt
GO_Central
MGI
PMID:3447593 PMID:16377659 GO_REF:0000033 MGI:3615066 NCBI chr 3:135,191,367...135,277,165
Ensembl chr 3:135,191,372...135,277,165
JBrowse link
G Nccrp1 non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:28,243,017...28,247,168
Ensembl chr 7:28,243,021...28,246,679
JBrowse link
G Neu2 neuraminidase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:87,501,749...87,525,567
Ensembl chr 1:87,437,611...87,525,567
JBrowse link
G Neu4 sialidase 4 involved_in IDA
ISO
(MGI:4361102|PMID:19506080), (MGI:5427293|PMID:22393058) UniProt
MGI
PMID:19506080 PMID:22393058 GO_REF:0000119 MGI:4361102 MGI:4834177 MGI:5427293 NCBI chr 1:93,948,215...93,956,056
Ensembl chr 1:93,948,173...93,956,056
JBrowse link
G Ngly1 N-glycanase 1 involved_in IDA
IBA
ISO
(MGI:3054122|PMID:15358861) UniProt
GO_Central
MGI
PMID:15358861 GO_REF:0000033 GO_REF:0000119 MGI:3054122 MGI:4834177 NCBI chr14:6,157,837...6,220,449
Ensembl chr14:6,157,837...6,220,483
JBrowse link
G Stt3b STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:115,071,538...115,139,536
Ensembl chr 9:115,071,649...115,139,489
JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal2 hyaluronoglucosaminidase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:107,445,096...107,449,975
Ensembl chr 9:107,445,144...107,449,978
JBrowse link
G Ids iduronate 2-sulfatase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:69,386,675...69,429,437
Ensembl chr  X:69,386,675...69,408,690
JBrowse link
G Idua iduronidase, alpha-L acts_upstream_of_or_within
involved_in
ISO
IMP
IDA
(PMID:19751987)
(PMID:21873421)
(PMID:16979922)
(PMID:16979922), (PMID:22580166)
(PMID:19834056)
RGD
MGI
PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... GO_REF:0000096 MGI:4417868 RGD:1599427 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 acts_upstream_of_or_within IDA (PMID:11278811) MGI PMID:11278811 NCBI chr 7:110,449,814...110,462,160
Ensembl chr 7:110,449,814...110,462,446
JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase (sulfamidase) involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:119,234,315...119,246,336
Ensembl chr11:119,234,251...119,246,362
JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc1 glypican 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:92,759,367...92,787,933
Ensembl chr 1:92,759,367...92,788,501
JBrowse link
G Gusb glucuronidase, beta involved_in IMP (PMID:11273777), (PMID:23897660) MGI PMID:11273777 PMID:23897660 NCBI chr 5:130,011,278...130,031,890
Ensembl chr 5:130,017,852...130,031,890
JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase involved_in IGI (PMID:16960811) MGI PMID:16960811 NCBI chr 8:26,432,495...26,466,704
Ensembl chr 8:26,434,481...26,466,781
JBrowse link
G Hpse heparanase involved_in ISO
IDA
(PMID:12460766) MGI PMID:12460766 GO_REF:0000119 MGI:4834177 NCBI chr 5:100,827,350...100,867,582
Ensembl chr 5:100,827,350...100,867,582
JBrowse link
G Ids iduronate 2-sulfatase involved_in IMP (PMID:17876721) MGI PMID:17876721 NCBI chr  X:69,386,675...69,429,437
Ensembl chr  X:69,386,675...69,408,690
JBrowse link
G Idua iduronidase, alpha-L involved_in IMP (PMID:15979918)
(PMID:25854773)
MGI PMID:15979918 PMID:25854773 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) involved_in IMP (PMID:10588735) MGI PMID:10588735 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498
JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase (sulfamidase) involved_in ISO
IMP
IBA
(PMID:11273777)
(PMID:10561464)
MGI
GO_Central
PMID:10561464 PMID:11273777 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:119,234,315...119,246,336
Ensembl chr11:119,234,251...119,246,362
JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua iduronidase, alpha-L acts_upstream_of_or_within IMP
IDA
ISO
(PMID:19751987)
(PMID:21873421)
(PMID:19834056)
MGI PMID:19751987 PMID:19834056 PMID:21873421 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ataxia telangiectasia mutated involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:44,513,567...44,558,036
Ensembl chr18:44,513,569...44,558,036
JBrowse link
G Eri1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 8:35,932,419...35,962,687
Ensembl chr 8:35,932,407...35,963,350
JBrowse link
G Exosc10 exosome component 10 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:148,642,870...148,666,854
Ensembl chr 4:148,642,886...148,666,858
JBrowse link
G Exosc4 exosome component 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:76,211,597...76,214,870
Ensembl chr15:76,211,597...76,214,877
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:26,275,326...26,294,003
Ensembl chr 8:26,275,316...26,294,003
JBrowse link
G Mtpap mitochondrial poly(A) polymerase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:4,375,573...4,399,888
Ensembl chr18:4,375,592...4,397,330
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:93,282,363...93,330,662
Ensembl chr13:93,282,790...93,328,893
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:88,925,229...88,989,942
Ensembl chr 8:88,925,841...88,986,350
JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr19:8,931,199...8,943,572
Ensembl chr19:8,931,211...8,943,574
JBrowse link
G Tut4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 4:108,316,607...108,416,612
Ensembl chr 4:108,316,623...108,416,618
JBrowse link
G Tut7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr13:59,919,690...59,971,060
Ensembl chr13:59,919,375...59,970,961
JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:70,784,143...70,806,418
Ensembl chr 8:70,784,175...70,805,928
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:95,836,803...95,939,859
Ensembl chr 9:95,836,813...95,939,856
JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 antigen involved_in IMP
IDA
ISO
(PMID:26528478)
(PMID:15090545), (PMID:16945930)
MGI PMID:15090545 PMID:16945930 PMID:26528478 GO_REF:0000119 MGI:4834177 NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010
JBrowse link
G Cemip cell migration inducing protein, hyaluronan binding involved_in IDA
ISO
(MGI:5545862|PMID:24251095) UniProt
MGI
PMID:24251095 GO_REF:0000119 MGI:4834177 MGI:5545862 NCBI chr 7:83,582,065...83,735,893
Ensembl chr 7:83,582,065...83,735,710
JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 involved_in IMP (MGI:6810380|PMID:34624311) UniProt PMID:34624311 MGI:6810380 NCBI chr19:21,755,704...21,835,724
Ensembl chr19:21,755,706...21,835,724
JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257
JBrowse link
G Gusb glucuronidase, beta involved_in IMP
ISO
(PMID:20385825)
(PMID:6459778)
(PMID:7354065)
MGI PMID:6459778 PMID:7354065 PMID:20385825 NCBI chr 5:130,011,278...130,031,890
Ensembl chr 5:130,017,852...130,031,890
JBrowse link
G Hexa hexosaminidase A involved_in IMP (PMID:22451654) MGI PMID:22451654 NCBI chr 9:59,446,966...59,472,392
Ensembl chr 9:59,446,823...59,472,392
JBrowse link
G Hexb hexosaminidase B involved_in IMP (PMID:22451654) MGI PMID:22451654 NCBI chr13:97,312,839...97,334,865
Ensembl chr13:97,312,839...97,334,865
JBrowse link
G Hmmr hyaluronan mediated motility receptor (RHAMM) involved_in IDA
IMP
(PMID:26528478) MGI PMID:26528478 NCBI chr11:40,592,215...40,624,290
Ensembl chr11:40,592,222...40,624,249
JBrowse link
G Hyal1 hyaluronoglucosaminidase 1 involved_in ISO
IMP
IBA
(PMID:22451654), (PMID:26887442) MGI
GO_Central
PMID:22451654 PMID:26887442 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:107,454,149...107,458,898
Ensembl chr 9:107,454,126...107,458,909
JBrowse link
G Hyal2 hyaluronoglucosaminidase 2 involved_in ISS
IBA
IMP
ISO
(MGI:3847143|PMID:19443707)
(PMID:23172227), (PMID:26887442)
UniProt
GO_Central
MGI
PMID:19443707 PMID:23172227 PMID:26887442 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:3847143 MGI:4417868 MGI:4834177 NCBI chr 9:107,445,096...107,449,975
Ensembl chr 9:107,445,144...107,449,978
JBrowse link
G Hyal3 hyaluronoglucosaminidase 3 involved_in IDA
IBA
ISO
(MGI:4834982|PMID:20586096) UniProt
GO_Central
MGI
PMID:20586096 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:4834982 NCBI chr 9:107,458,495...107,464,558
Ensembl chr 9:107,458,017...107,464,558
JBrowse link
G Hyal4 hyaluronoglucosaminidase 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:24,748,366...24,766,518
Ensembl chr 6:24,748,328...24,767,661
JBrowse link
G Hyal5 hyaluronoglucosaminidase 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:24,857,982...24,891,963
Ensembl chr 6:24,857,996...24,891,957
JBrowse link
G Hyal6 hyaluronoglucosaminidase 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:24,733,244...24,745,451
Ensembl chr 6:24,733,244...24,745,451
JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IDA (PMID:11278811) MGI PMID:11278811 NCBI chr 7:110,449,814...110,462,160
Ensembl chr 7:110,449,814...110,462,446
JBrowse link
G Slc9a1 solute carrier family 9 (sodium/hydrogen exchanger), member 1 involved_in ISO (PMID:15090545) MGI PMID:15090545 NCBI chr 4:133,097,022...133,151,013
Ensembl chr 4:133,097,017...133,151,013
JBrowse link
G Spam1 sperm adhesion molecule 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:24,791,187...24,801,047
Ensembl chr 6:24,791,187...24,801,047
JBrowse link
G Stab2 stabilin 2 involved_in IMP (PMID:22371575) MGI PMID:22371575 NCBI chr10:86,677,058...86,843,902
Ensembl chr10:86,677,062...86,843,889
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
insulin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP
ISO
(MGI:3819735|PMID:18544705) UniProt
MGI
PMID:18544705 GO_REF:0000096 MGI:3819735 MGI:4417868 NCBI chr 7:25,161,127...25,177,072
Ensembl chr 7:25,161,132...25,177,028
JBrowse link
G Ceacam2 CEA cell adhesion molecule 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:25,215,467...25,239,429
Ensembl chr 7:25,215,467...25,239,282
JBrowse link
G Cela2a chymotrypsin-like elastase family, member 2A involved_in ISO (PMID:31358993) UniProt PMID:31358993 NCBI chr 4:141,542,265...141,553,316
Ensembl chr 4:141,542,273...141,553,471
JBrowse link
G Ctsd cathepsin D involved_in IDA (PMID:27703010) MGI PMID:27703010 NCBI chr 7:141,929,647...141,941,564
Ensembl chr 7:141,929,648...141,941,775
JBrowse link
G Ide insulin degrading enzyme involved_in IMP
IDA
ISO
(MGI:5583899|PMID:24847884)
(PMID:27703010)
UniProt
MGI
PMID:24847884 PMID:27703010 GO_REF:0000119 MGI:4834177 MGI:5583899 NCBI chr19:37,246,140...37,341,664
Ensembl chr19:37,246,142...37,340,010
JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase involved_in ISO RGD
MGI
PMID:3161730 GO_REF:0000096 MGI:4417868 RGD:1600571 NCBI chr10:121,200,995...121,233,159
Ensembl chr10:121,200,995...121,233,154
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:20,978,273...21,220,787
Ensembl chr13:20,978,283...21,220,787
JBrowse link
lipoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apob apolipoprotein B acts_upstream_of_or_within IGI (PMID:15863839) MGI PMID:15863839 NCBI chr12:8,027,629...8,066,839
Ensembl chr12:8,027,648...8,066,835
JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within IMP (PMID:17720994) MGI PMID:17720994 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Atm ataxia telangiectasia mutated acts_upstream_of_or_within IGI (PMID:15863839) MGI PMID:15863839 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
JBrowse link
G Ctsd cathepsin D involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:141,929,647...141,941,564
Ensembl chr 7:141,929,648...141,941,775
JBrowse link
G Ldlr low density lipoprotein receptor acts_upstream_of_or_within IMP
IDA
(PMID:15805190), (PMID:9788969)
(PMID:15741654)
MGI PMID:9788969 PMID:15741654 PMID:15805190 NCBI chr 9:21,634,872...21,661,215
Ensembl chr 9:21,634,779...21,661,215
JBrowse link
G Lipa lysosomal acid lipase A acts_upstream_of_or_within IMP (PMID:33357458) MGI PMID:33357458 NCBI chr19:34,469,716...34,504,874
Ensembl chr19:34,469,718...34,504,874
JBrowse link
lncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr82 WD repeat domain containing 82 involved_in IDA
ISO
(MGI:6867107|PMID:33767452) UniProt
MGI
PMID:33767452 GO_REF:0000119 MGI:4834177 MGI:6867107 NCBI chr 9:106,048,098...106,068,905
Ensembl chr 9:106,048,127...106,068,338
JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 involved_in IDA
ISO
(MGI:6867107|PMID:33767452) UniProt
MGI
PMID:33767452 GO_REF:0000119 MGI:4834177 MGI:6867107 NCBI chr 7:16,132,549...16,171,621
Ensembl chr 7:16,134,835...16,171,621
JBrowse link
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISS
ISO
(MGI:2450048|PMID:12552133) HGNC-UCL
MGI
PMID:12552133 GO_REF:0000119 MGI:2450048 MGI:4834177 NCBI chr 4:106,299,531...106,321,522
Ensembl chr 4:106,299,526...106,321,526
JBrowse link
lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5z1 adaptor-related protein complex 5, zeta 1 subunit acts_upstream_of_or_within IMP (PMID:30930081) MGI PMID:30930081 NCBI chr 5:142,448,960...142,464,471
Ensembl chr 5:142,449,699...142,464,465
JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:34,475,751...34,478,753
Ensembl chr 1:34,475,751...34,478,753
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IMP (MGI:1346962|PMID:10527801), (MGI:3757820|PMID:17855597) UniProt PMID:10527801 PMID:17855597 MGI:1346962 MGI:3757820 NCBI chr 7:126,170,571...126,184,991
Ensembl chr 7:126,170,379...126,184,989
JBrowse link
G Dpp7 dipeptidylpeptidase 7 acts_upstream_of_or_within IMP (PMID:28728022) MGI PMID:28728022 NCBI chr 2:25,242,302...25,246,365
Ensembl chr 2:25,242,288...25,246,371
JBrowse link
G Grn granulin acts_upstream_of_or_within IMP (PMID:28728022) MGI PMID:28728022 NCBI chr11:102,321,333...102,327,635
Ensembl chr11:102,321,141...102,327,874
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:37,488,524...37,545,337
Ensembl chr  X:37,490,234...37,545,331
JBrowse link
G Mgat3 mannoside acetylglucosaminyltransferase 3 acts_upstream_of IMP (PMID:25592972), (PMID:26467158) MGI PMID:25592972 PMID:26467158 NCBI chr15:80,057,852...80,099,720
Ensembl chr15:80,057,922...80,099,720
JBrowse link
G Psap prosaposin acts_upstream_of_or_within IMP (PMID:12813057) MGI PMID:12813057 NCBI chr10:60,113,436...60,138,379
Ensembl chr10:60,113,449...60,138,376
JBrowse link
G Slc17a9 solute carrier family 17, member 9 acts_upstream_of_or_within IMP (MGI:7447186|PMID:24962569) UniProt PMID:24962569 MGI:7447186 NCBI chr 2:180,363,989...180,384,073
Ensembl chr 2:180,367,056...180,384,073
JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within IMP (PMID:28728022) MGI PMID:28728022 NCBI chr 6:13,069,758...13,089,268
Ensembl chr 6:13,069,758...13,089,268
JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:78,397,881...78,402,994
Ensembl chr11:78,397,881...78,402,998
JBrowse link
G Tpp1 tripeptidyl peptidase I acts_upstream_of_or_within IMP (PMID:28728022) MGI PMID:28728022 NCBI chr 7:105,394,018...105,401,489
Ensembl chr 7:105,394,018...105,401,442
JBrowse link
G Vps13a vacuolar protein sorting 13A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:16,592,730...16,758,433
Ensembl chr19:16,592,730...16,758,297
JBrowse link
mannoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancer, mannosidase alpha-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:108,800,984...108,836,317
Ensembl chr 6:108,805,602...108,836,317
JBrowse link
G Edem2 ER degradation enhancer, mannosidase alpha-like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:155,543,593...155,571,395
Ensembl chr 2:155,543,597...155,571,395
JBrowse link
G Edem3 ER degradation enhancer, mannosidase alpha-like 3 involved_in IDA
ISO
(MGI:3654428|PMID:16431915) ParkinsonsUK-UCL
MGI
PMID:16431915 GO_REF:0000119 MGI:3654428 MGI:4834177 NCBI chr 1:151,631,099...151,698,079
Ensembl chr 1:151,631,122...151,697,802
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:25,222,742...25,242,225
Ensembl chr 2:25,222,350...25,242,224
JBrowse link
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H13 histocompatibility 13 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:152,511,292...152,550,590
Ensembl chr 2:152,511,381...152,550,590
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in IDA (MGI:5437551|PMID:22795130) ParkinsonsUK-UCL PMID:22795130 MGI:5437551 NCBI chr 1:82,294,178...82,423,087
Ensembl chr 1:82,294,173...82,423,087
JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in IMP
IBA
ISO
IDA
(MGI:5494337|PMID:23594738)
(MGI:5603455|PMID:25119025)
UniProt
GO_Central
MGI
PMID:23594738 PMID:25119025 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5494337 MGI:5603455 NCBI chr 1:86,629,646...86,977,819
Ensembl chr 1:86,631,530...86,977,817
JBrowse link
G Lin28a lin-28 homolog A involved_in IMP
ISO
IDA
(MGI:4359358|PMID:18604195), (MGI:4359360|PMID:18292307)
(MGI:5294254|PMID:21962509)
UniProt
MGI
BHF-UCL
PMID:18292307 PMID:18604195 PMID:21962509 GO_REF:0000119 MGI:4359358 MGI:4359360 MGI:4834177 MGI:5294254 NCBI chr 4:133,730,641...133,746,504
Ensembl chr 4:133,730,641...133,746,152
JBrowse link
G Lin28b lin-28 homolog B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:45,252,713...45,362,410
Ensembl chr10:45,252,716...45,362,491
JBrowse link
G Parn poly(A)-specific ribonuclease (deadenylation nuclease) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:13,355,828...13,486,035
Ensembl chr16:13,355,824...13,486,034
JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:28,480,332...28,935,161
Ensembl chr 6:28,475,138...28,935,161
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:88,925,229...88,989,942
Ensembl chr 8:88,925,841...88,986,350
JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:108,316,607...108,416,612
Ensembl chr 4:108,316,623...108,416,618
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:125,012,207...125,021,674
Ensembl chr 4:125,012,216...125,021,633
JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC catalytic subunit 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 4:126,328,805...126,362,500
Ensembl chr 4:126,328,805...126,362,376
JBrowse link
G Ago2 argonaute RISC catalytic subunit 2 involved_in IDA
ISO
(MGI:5616320|PMID:16357216) BHF-UCL
MGI
PMID:16357216 GO_REF:0000119 MGI:4834177 MGI:5616320 NCBI chr15:72,967,693...73,056,777
Ensembl chr15:72,967,693...73,056,784
JBrowse link
G Ago3 argonaute RISC catalytic subunit 3 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 4:126,220,797...126,323,360
Ensembl chr 4:126,225,497...126,323,349
JBrowse link
G Ago4 argonaute RISC catalytic subunit 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 4:126,383,280...126,427,379
Ensembl chr 4:126,383,334...126,427,265
JBrowse link
G Mir100 microRNA 100 involved_in ISO (PMID:22684006) BHF-UCL PMID:22684006 NCBI chr 9:41,442,721...41,442,800
Ensembl chr 9:41,442,721...41,442,800
JBrowse link
G Mir106a microRNA 106a involved_in ISO (PMID:22912877), (PMID:26265888), (PMID:27325313) BHF-UCL PMID:22912877 PMID:26265888 PMID:27325313 NCBI chr  X:51,831,380...51,831,444
Ensembl chr  X:51,831,380...51,831,444
JBrowse link
G Mir106b microRNA 106b involved_in ISO (PMID:27325313) BHF-UCL PMID:27325313 NCBI chr 5:138,163,999...138,164,080
Ensembl chr 5:138,163,999...138,164,080
JBrowse link
G Mir125a microRNA 125a involved_in ISO (PMID:30670152) ARUK-UCL PMID:30670152 NCBI chr17:18,051,074...18,051,141
Ensembl chr17:18,051,074...18,051,141
JBrowse link
G Mir125b-1 microRNA 125b-1 involved_in ISO (PMID:28214897) BHF-UCL PMID:28214897 NCBI chr 9:41,493,222...41,493,298
Ensembl chr 9:41,493,222...41,493,298
JBrowse link
G Mir125b-2 microRNA 125b-2 involved_in ISO (PMID:28214897) BHF-UCL PMID:28214897 NCBI chr16:77,443,161...77,443,231
Ensembl chr16:77,443,161...77,443,231
JBrowse link
G Mir128-1 microRNA 128-1 involved_in ISO (PMID:33058756) BHF-UCL PMID:33058756 NCBI chr 1:128,130,098...128,130,167
Ensembl chr 1:128,130,098...128,130,167
JBrowse link
G Mir128-2 microRNA 128-2 involved_in ISO (PMID:33058756) BHF-UCL PMID:33058756 NCBI chr 9:111,947,704...111,947,779
Ensembl chr 9:111,947,704...111,947,779
JBrowse link
G Mir130a microRNA 130a involved_in ISO (PMID:30741461) BHF-UCL PMID:30741461 NCBI chr 2:84,571,459...84,571,522
Ensembl chr 2:84,571,459...84,571,522
JBrowse link
G Mir130b microRNA 130b involved_in ISO (PMID:24040078) BHF-UCL PMID:24040078 NCBI chr16:16,941,925...16,942,006
Ensembl chr16:16,941,925...16,942,006
JBrowse link
G Mir133a-1 microRNA 133a-1 involved_in ISO (PMID:32205184) ARUK-UCL PMID:32205184 NCBI chr18:10,782,909...10,782,976
Ensembl chr18:10,782,909...10,782,976
JBrowse link
G Mir133a-2 microRNA 133a-2 involved_in ISO (PMID:32205184) ARUK-UCL PMID:32205184 NCBI chr 2:180,040,172...180,040,275
Ensembl chr 2:180,040,172...180,040,275
JBrowse link
G Mir135b microRNA 135b involved_in ISO (PMID:27793001) BHF-UCL PMID:27793001 NCBI chr 1:132,125,826...132,125,922
Ensembl chr 1:132,125,826...132,125,922
JBrowse link
G Mir137 microRNA 137 involved_in ISO (PMID:23275153) BHF-UCL PMID:23275153 NCBI chr 3:118,227,506...118,227,578
Ensembl chr 3:118,227,506...118,227,578
JBrowse link
G Mir140 microRNA 140 involved_in ISO (PMID:24928442) BHF-UCL PMID:24928442 NCBI chr 8:108,277,876...108,277,945
Ensembl chr 8:108,277,876...108,277,945
JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:24558198), (PMID:26572508), (PMID:31168355) BHF-UCL PMID:24558198 PMID:26572508 PMID:31168355 NCBI chr11:87,647,690...87,647,753
Ensembl chr11:87,647,690...87,647,753
JBrowse link
G Mir145a microRNA 145a involved_in ISO (PMID:25704091)
(PMID:25323858), (PMID:29883722)
BHF-UCL PMID:25323858 PMID:25704091 PMID:29883722 NCBI chr18:61,780,896...61,780,965
Ensembl chr18:61,780,896...61,780,965
JBrowse link
G Mir146 microRNA 146 involved_in ISO (PMID:30779466) BHF-UCL PMID:30779466 NCBI chr11:43,265,224...43,265,288
Ensembl chr11:43,265,224...43,265,288
JBrowse link
G Mir149 microRNA 149 involved_in ISO (PMID:28260877) ARUK-UCL PMID:28260877 NCBI chr 1:92,778,100...92,778,165
Ensembl chr 1:92,778,100...92,778,165
JBrowse link
G Mir151 microRNA 151 involved_in ISO (PMID:20305651) BHF-UCL PMID:20305651 NCBI chr15:73,126,664...73,126,731
Ensembl chr15:73,126,664...73,126,731
JBrowse link
G Mir16-1 microRNA 16-1 involved_in ISO (PMID:24418124) ARUK-UCL PMID:24418124 NCBI chr14:61,869,329...61,869,421
Ensembl chr14:61,869,329...61,869,421
JBrowse link
G Mir16-2 microRNA 16-2 involved_in ISO (PMID:24418124) ARUK-UCL PMID:24418124 NCBI chr 3:68,917,235...68,917,329
Ensembl chr 3:68,917,235...68,917,329
JBrowse link
G Mir18 microRNA 18 involved_in ISO (PMID:28131417), (PMID:29988076), (PMID:34937502) ARUK-UCL PMID:28131417 PMID:29988076 PMID:34937502 NCBI chr14:115,281,283...115,281,378
Ensembl chr14:115,281,283...115,281,378
JBrowse link
G Mir181a-1 microRNA 181a-1 involved_in ISO (PMID:22714950)
(PMID:25535255)
BHF-UCL
ARUK-UCL
PMID:22714950 PMID:25535255 NCBI chr 1:137,894,193...137,894,279
Ensembl chr 1:137,894,193...137,894,279
JBrowse link
G Mir181a-2 microRNA 181a-2 involved_in ISO (PMID:22714950)
(PMID:25535255)
BHF-UCL
ARUK-UCL
PMID:22714950 PMID:25535255 NCBI chr 2:38,742,747...38,742,822
Ensembl chr 2:38,742,747...38,742,822
JBrowse link
G Mir181b-1 microRNA 181b-1 involved_in ISO (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr 1:137,894,377...137,894,456
Ensembl chr 1:137,894,377...137,894,456
JBrowse link
G Mir181b-2 microRNA 181b-2 involved_in ISO (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr 2:38,743,842...38,743,930
Ensembl chr 2:38,743,842...38,743,930
JBrowse link
G Mir181c microRNA 181c involved_in ISO (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr 8:84,905,502...84,905,590
Ensembl chr 8:84,905,502...84,905,590
JBrowse link
G Mir181d microRNA 181d involved_in ISO (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr 8:84,905,345...84,905,416
Ensembl chr 8:84,905,345...84,905,416
JBrowse link
G Mir185 microRNA 185 involved_in ISO (PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187) BHF-UCL PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187 NCBI chr16:18,145,265...18,145,329
Ensembl chr16:18,145,265...18,145,329
JBrowse link
G Mir190b microRNA 190b involved_in ISO (PMID:32039833) BHF-UCL PMID:32039833 NCBI chr 3:89,977,327...89,977,406
Ensembl chr 3:89,977,327...89,977,406
JBrowse link
G Mir191 microRNA 191 involved_in ISO (PMID:31874245) BHF-UCL PMID:31874245 NCBI chr 9:108,445,518...108,445,591
Ensembl chr 9:108,445,518...108,445,591
JBrowse link
G Mir192 microRNA 192 involved_in ISO (PMID:28483554) BHF-UCL PMID:28483554 NCBI chr19:6,314,874...6,314,962
Ensembl chr19:6,314,874...6,314,962
JBrowse link
G Mir193a microRNA 193a involved_in ISO (PMID:29725386) BHF-UCL PMID:29725386 NCBI chr11:79,602,795...79,602,860
Ensembl chr11:79,602,795...79,602,860
JBrowse link
G Mir195a microRNA 195a involved_in ISO (PMID:31921616) BHF-UCL PMID:31921616 NCBI chr11:70,125,868...70,125,961
Ensembl chr11:70,125,868...70,125,961
JBrowse link
G Mir196a-1 microRNA 196a-1 acts_upstream_of_or_within IDA (PMID:15105502), (PMID:15361871) MGI PMID:15105502 PMID:15361871 NCBI chr11:96,155,990...96,156,091
Ensembl chr11:96,155,990...96,156,091
JBrowse link
G Mir196a-2 microRNA 196a-2 acts_upstream_of_or_within IDA (PMID:15105502), (PMID:15361871) MGI PMID:15105502 PMID:15361871 NCBI chr15:102,881,785...102,881,869
Ensembl chr15:102,881,785...102,881,869
JBrowse link
G Mir196b microRNA 196b acts_upstream_of_or_within IDA (PMID:15105502) MGI PMID:15105502 NCBI chr 6:52,207,061...52,207,145
Ensembl chr 6:52,207,061...52,207,145
JBrowse link
G Mir199b microRNA 199b involved_in ISO (PMID:32082362) BHF-UCL PMID:32082362 NCBI chr 2:32,208,472...32,208,581
Ensembl chr 2:32,208,472...32,208,581
JBrowse link
G Mir19a microRNA 19a involved_in ISO (PMID:27098600), (PMID:29130787) BHF-UCL PMID:27098600 PMID:29130787 NCBI chr14:115,281,432...115,281,513
Ensembl chr14:115,281,432...115,281,513
JBrowse link
G Mir19b-1 microRNA 19b-1 involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr14:115,281,737...115,281,823
Ensembl chr14:115,281,737...115,281,823
JBrowse link
G Mir19b-2 microRNA 19b-2 involved_in ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:51,830,860...51,830,943
Ensembl chr  X:51,830,860...51,830,943
JBrowse link
G Mir1a-1 microRNA 1a-1 involved_in ISO (PMID:23499676), (PMID:25802280) BHF-UCL PMID:23499676 PMID:25802280 NCBI chr 2:180,030,841...180,030,917
Ensembl chr 2:180,030,841...180,030,917
JBrowse link
G Mir1a-2 microRNA 1a-2 involved_in ISO (PMID:23499676), (PMID:25802280) BHF-UCL PMID:23499676 PMID:25802280 NCBI chr18:10,785,481...10,785,552
Ensembl chr18:10,785,481...10,785,552
JBrowse link
G Mir200b microRNA 200b involved_in ISO (PMID:22522429) ARUK-UCL PMID:22522429 NCBI chr 4:156,140,138...156,140,207
Ensembl chr 4:156,140,138...156,140,207
JBrowse link
G Mir200c microRNA 200c involved_in ISO (PMID:22522429) ARUK-UCL PMID:22522429 NCBI chr 6:124,695,285...124,695,353
Ensembl chr 6:124,695,285...124,695,353
JBrowse link
G Mir204 microRNA 204 involved_in ISO (PMID:20056717) BHF-UCL PMID:20056717 NCBI chr19:22,727,969...22,728,036
Ensembl chr19:22,727,969...22,728,036
JBrowse link
G Mir206 microRNA 206 involved_in ISO (PMID:23499676) BHF-UCL PMID:23499676 NCBI chr 1:20,749,234...20,749,306
Ensembl chr 1:20,749,234...20,749,306
JBrowse link
G Mir20a microRNA 20a involved_in ISO (PMID:29653364), (PMID:31368162) ARUK-UCL PMID:29653364 PMID:31368162 NCBI chr14:115,281,589...115,281,695
Ensembl chr14:115,281,589...115,281,695
JBrowse link
G Mir20b microRNA 20b involved_in ISO (PMID:32336590) BHF-UCL PMID:32336590 NCBI chr  X:51,830,990...51,831,069
Ensembl chr  X:51,830,990...51,831,069
JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:29944867) BHF-UCL PMID:29944867 NCBI chr 7:140,801,297...140,801,406
Ensembl chr 7:140,801,297...140,801,406
JBrowse link
G Mir211 microRNA 211 involved_in ISO (PMID:21109473) BHF-UCL PMID:21109473 NCBI chr 7:63,855,554...63,855,659
Ensembl chr 7:63,855,554...63,855,659
JBrowse link
G Mir212 microRNA 212 involved_in ISO (PMID:26693054) BHF-UCL PMID:26693054 NCBI chr11:75,064,214...75,064,304
Ensembl chr11:75,064,214...75,064,304
JBrowse link
G Mir214 microRNA 214 involved_in ISO (PMID:30703347) BHF-UCL PMID:30703347 NCBI chr 1:162,050,937...162,051,046
Ensembl chr 1:162,050,937...162,051,046
JBrowse link
G Mir223 microRNA 223 involved_in ISO (PMID:23459944), (PMID:30807577), (PMID:34637033) ARUK-UCL PMID:23459944 PMID:30807577 PMID:34637033 NCBI chr  X:95,286,423...95,286,532
Ensembl chr  X:95,286,423...95,286,532
JBrowse link
G Mir23a microRNA 23a involved_in ISO (PMID:26400397) BHF-UCL PMID:26400397 NCBI chr 8:84,935,147...84,935,221
Ensembl chr 8:84,935,147...84,935,221
JBrowse link
G Mir24-1 microRNA 24-1 involved_in ISO (PMID:30378100) BHF-UCL PMID:30378100 NCBI chr13:63,449,022...63,449,089
Ensembl chr13:63,449,022...63,449,089
JBrowse link
G Mir24-2 microRNA 24-2 involved_in ISO (PMID:30378100) BHF-UCL PMID:30378100 NCBI chr 8:84,935,444...84,935,550
Ensembl chr 8:84,935,444...84,935,550
JBrowse link
G Mir26b microRNA 26b involved_in ISO (PMID:25536365) ARUK-UCL PMID:25536365 NCBI chr 1:74,433,469...74,433,553
Ensembl chr 1:74,433,469...74,433,553
JBrowse link
G Mir27a microRNA 27a involved_in ISO (PMID:25915942), (PMID:26400397) BHF-UCL PMID:25915942 PMID:26400397 NCBI chr 8:84,935,301...84,935,387
Ensembl chr 8:84,935,301...84,935,387
JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr13:63,448,526...63,448,598
Ensembl chr13:63,448,526...63,448,598
JBrowse link
G Mir29b-1 microRNA 29b-1 involved_in ISO (PMID:26175849) BHF-UCL PMID:26175849 NCBI chr 6:31,039,958...31,040,028
Ensembl chr 6:31,039,958...31,040,028
JBrowse link
G Mir29b-2 microRNA 29b-2 involved_in ISO (PMID:26175849) BHF-UCL PMID:26175849 NCBI chr 1:194,719,348...194,719,428
Ensembl chr 1:194,719,348...194,719,428
JBrowse link
G Mir302a microRNA 302a involved_in ISO (PMID:29046356) ARUK-UCL PMID:29046356 NCBI chr 3:127,339,145...127,339,213
Ensembl chr 3:127,339,145...127,339,213
JBrowse link
G Mir302c microRNA 302c involved_in ISO (PMID:22988237) BHF-UCL PMID:22988237 NCBI chr 3:127,339,012...127,339,079
Ensembl chr 3:127,339,012...127,339,079
JBrowse link
G Mir30b microRNA 30b involved_in ISO (PMID:23968872) BHF-UCL PMID:23968872 NCBI chr15:68,209,264...68,209,359
Ensembl chr15:68,209,264...68,209,359
JBrowse link
G Mir3107 microRNA 3107 involved_in ISO (PMID:25857263) BHF-UCL PMID:25857263 NCBI chr 8:23,632,589...23,632,678
Ensembl chr 8:23,632,589...23,632,678
JBrowse link
G Mir320 microRNA 320 involved_in ISO (PMID:32271402) BHF-UCL PMID:32271402 NCBI chr14:70,680,950...70,681,031
Ensembl chr14:70,680,950...70,681,031
JBrowse link
G Mir322 microRNA 322 involved_in ISO (PMID:29130787) BHF-UCL PMID:29130787 NCBI chr  X:52,143,132...52,143,226
Ensembl chr  X:52,143,132...52,143,226
JBrowse link
G Mir326 microRNA 326 involved_in ISO (PMID:24279830) BHF-UCL PMID:24279830 NCBI chr 7:99,201,476...99,201,570
Ensembl chr 7:99,201,476...99,201,570
JBrowse link
G Mir329 microRNA 329 involved_in ISO (PMID:23878390) BHF-UCL PMID:23878390 NCBI chr12:109,679,915...109,680,011
Ensembl chr12:109,679,915...109,680,011
JBrowse link
G Mir337 microRNA 337 involved_in ISO (PMID:22723956) BHF-UCL PMID:22723956 NCBI chr12:109,552,223...109,552,319
Ensembl chr12:109,552,223...109,552,319
JBrowse link
G Mir340 microRNA 340 involved_in ISO (PMID:28413603) BHF-UCL PMID:28413603 NCBI chr11:49,960,529...49,960,626
Ensembl chr11:49,960,529...49,960,626
JBrowse link
G Mir342 microRNA 342 involved_in ISO (PMID:23951060) BHF-UCL PMID:23951060 NCBI chr12:108,624,879...108,624,977
Ensembl chr12:108,624,879...108,624,977
JBrowse link
G Mir34b microRNA 34b involved_in ISO (PMID:22336710) BHF-UCL PMID:22336710 NCBI chr 9:51,014,862...51,014,945
Ensembl chr 9:51,014,862...51,014,945
JBrowse link
G Mir365-1 microRNA 365-1 involved_in ISO (PMID:30910589) ARUK-UCL PMID:30910589 NCBI chr16:13,271,704...13,271,790
Ensembl chr16:13,271,704...13,271,790
JBrowse link
G Mir365-2 microRNA 365-2 involved_in ISO (PMID:30910589) ARUK-UCL PMID:30910589 NCBI chr11:79,617,226...79,617,337
Ensembl chr11:79,617,226...79,617,337
JBrowse link
G Mir423 microRNA 423 involved_in ISO (PMID:32264887) BHF-UCL PMID:32264887 NCBI chr11:76,968,890...76,968,998
Ensembl chr11:76,968,890...76,968,998
JBrowse link
G Mir483 microRNA 483 involved_in ISO (PMID:26747772) BHF-UCL PMID:26747772 NCBI chr 7:142,208,661...142,208,733
Ensembl chr 7:142,208,661...142,208,733
JBrowse link
G Mir485 microRNA 485 involved_in ISO (PMID:30058740) BHF-UCL PMID:30058740 NCBI chr12:109,701,336...109,701,408
Ensembl chr12:109,701,336...109,701,408
JBrowse link
G Mir486 microRNA 486 involved_in ISO (PMID:25857263) BHF-UCL PMID:25857263 NCBI chr 8:23,632,571...23,632,698
Ensembl chr 8:23,632,571...23,632,698
JBrowse link
G Mir491 microRNA 491 involved_in ISO (PMID:25196641) BHF-UCL PMID:25196641 NCBI chr 4:88,040,277...88,040,362
Ensembl chr 4:88,040,277...88,040,362
JBrowse link
G Mir495 microRNA 495 involved_in ISO (PMID:33179110) BHF-UCL PMID:33179110 NCBI chr12:109,685,188...109,685,250
Ensembl chr12:109,685,188...109,685,250
JBrowse link
G Mir497 microRNA 497 involved_in ISO (PMID:29969696) BHF-UCL PMID:29969696 NCBI chr11:70,125,543...70,125,626
Ensembl chr11:70,125,543...70,125,626
JBrowse link
G Mir501 microRNA 501 involved_in ISO (PMID:31307515) BHF-UCL PMID:31307515 NCBI chr  X:7,107,482...7,107,590
Ensembl chr  X:7,107,482...7,107,590
JBrowse link
G Mir543 microRNA 543 involved_in ISO (PMID:24699721) BHF-UCL PMID:24699721 NCBI chr12:109,683,692...109,683,767
Ensembl chr12:109,683,692...109,683,767
JBrowse link
G Mir544 microRNA 544 involved_in ISO (PMID:27186677) BHF-UCL PMID:27186677 NCBI chr12:109,695,759...109,695,836
Ensembl chr12:109,695,759...109,695,836
JBrowse link
G Mir665 microRNA 665 involved_in ISO (PMID:34454184) BHF-UCL PMID:34454184 NCBI chr12:109,552,748...109,552,841
Ensembl chr12:109,552,748...109,552,841
JBrowse link
G Mir708 microRNA 708 involved_in ISO (PMID:26932538) BHF-UCL PMID:26932538 NCBI chr 7:95,898,631...95,898,739
Ensembl chr 7:95,898,631...95,898,739
JBrowse link
G Mir9-1 microRNA 9-1 involved_in ISO (PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr 3:88,122,905...88,122,993
Ensembl chr 3:88,122,905...88,122,993
JBrowse link
G Mir9-2 microRNA 9-2 involved_in ISO (PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr13:83,886,933...83,887,004
Ensembl chr13:83,886,933...83,887,004
JBrowse link
G Mir9-3 microRNA 9-3 involved_in ISO (PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr 7:79,155,012...79,155,101
Ensembl chr 7:79,155,012...79,155,101
JBrowse link
G Mir93 microRNA 93 involved_in ISO (PMID:24606633), (PMID:28797104) BHF-UCL PMID:24606633 PMID:28797104 NCBI chr 5:138,163,785...138,163,872
Ensembl chr 5:138,163,785...138,163,872
JBrowse link
G Mir96 microRNA 96 involved_in ISO (PMID:23459944) BHF-UCL PMID:23459944 NCBI chr 6:30,169,445...30,169,550
Ensembl chr 6:30,169,445...30,169,550
JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:27860183), (PMID:30195495)
(PMID:28251559)
BHF-UCL PMID:27860183 PMID:28251559 PMID:30195495 NCBI chr  X:150,696,210...150,696,317
Ensembl chr  X:150,696,210...150,696,317
JBrowse link
G Mirlet7a-1 microRNA let7a-1 involved_in ISO (PMID:17671087)
(PMID:30467960)
BHF-UCL PMID:17671087 PMID:30467960 NCBI chr13:48,691,655...48,691,748
Ensembl chr13:48,691,655...48,691,748
JBrowse link
G Mirlet7a-2 microRNA let7a-2 involved_in ISO (PMID:17671087)
(PMID:30467960)
BHF-UCL PMID:17671087 PMID:30467960 NCBI chr 9:41,448,012...41,448,107
Ensembl chr 9:41,448,012...41,448,107
JBrowse link
G Mirlet7b microRNA let7b involved_in ISO (PMID:29471394) BHF-UCL PMID:29471394 NCBI chr15:85,591,520...85,591,604
Ensembl chr15:85,591,520...85,591,604
JBrowse link
G Mirlet7c-1 microRNA let7c-1 involved_in ISO (PMID:19841744) BHF-UCL PMID:19841744 NCBI chr16:77,396,545...77,396,638
Ensembl chr16:77,396,545...77,396,638
JBrowse link
G Mirlet7c-2 microRNA let7c-2 involved_in ISO (PMID:17671087)
(PMID:30467960)
BHF-UCL PMID:17671087 PMID:30467960 NCBI chr15:85,590,804...85,590,898
Ensembl chr15:85,590,804...85,590,898
JBrowse link
G Mirlet7e microRNA let7e involved_in ISO (PMID:30670152) ARUK-UCL PMID:30670152 NCBI chr17:18,050,614...18,050,706
Ensembl chr17:18,050,614...18,050,706
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:104,702,144...104,725,935
Ensembl chr 3:104,702,152...104,725,879
JBrowse link
mitochondrial DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Endog endonuclease G involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:30,061,525...30,064,057
Ensembl chr 2:30,061,505...30,064,081
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde12 phosphodiesterase 12 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:26,381,113...26,390,823
Ensembl chr14:26,381,113...26,391,038
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in IMP
IBA
ISO
(MGI:4881376|PMID:20691904) UniProt
GO_Central
MGI
PMID:20691904 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:4881376 NCBI chr11:29,080,236...29,112,010
Ensembl chr11:29,080,744...29,111,828
JBrowse link
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517
JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517
JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517
JBrowse link
mitochondrial protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:42,188,577...42,354,561
Ensembl chr10:42,188,581...42,354,561
JBrowse link
G Bnip3 BCL2/adenovirus E1B interacting protein 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:138,492,565...138,511,235
Ensembl chr 7:138,492,565...138,511,248
JBrowse link
G Bnip3l BCL2/adenovirus E1B interacting protein 3-like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:67,222,688...67,246,580
Ensembl chr14:67,222,688...67,246,326
JBrowse link
G Bnip3l-ps BCL2/adenovirus E1B interacting protein 3-like, pseudogene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:18,266,548...18,267,777
Ensembl chr12:18,266,599...18,267,255
JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:32,893,645...32,943,008
Ensembl chr 5:32,893,645...32,942,990
JBrowse link
G Spata18 spermatogenesis associated 18 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:73,808,723...73,836,927
Ensembl chr 5:73,808,722...73,836,855
JBrowse link
G Yme1l1 YME1-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:23,046,517...23,089,272
Ensembl chr 2:23,046,381...23,089,272
JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich PPR-motif containing acts_upstream_of IMP (PMID:21880015)
(PMID:22045337)
MGI PMID:21880015 PMID:22045337 NCBI chr17:85,012,675...85,098,214
Ensembl chr17:85,012,675...85,098,217
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:29,080,236...29,112,010
Ensembl chr11:29,080,744...29,111,828
JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517
JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:6,107,977...6,109,554
Ensembl chr19:6,107,874...6,109,554
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier involved_in
acts_upstream_of_or_within
IBA
IDA
(PMID:15485925) GO_Central
MGI
PMID:15485925 GO_REF:0000033 NCBI chr 4:156,283,881...156,285,275
Ensembl chr 4:156,283,912...156,285,253
JBrowse link
G Nedd8 neural precursor cell expressed, developmentally down-regulated gene 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:55,899,720...55,909,337
Ensembl chr14:55,899,720...55,909,581
JBrowse link
G Rps27a ribosomal protein S27A involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:29,495,842...29,498,040
Ensembl chr11:29,495,846...29,498,109
JBrowse link
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,960,913...70,963,067
Ensembl chr 8:70,960,913...70,963,451
JBrowse link
G Uba7 ubiquitin-like modifier activating enzyme 7 acts_upstream_of_or_within IDA (PMID:15485925) MGI PMID:15485925 NCBI chr 9:107,852,766...107,861,255
Ensembl chr 9:107,852,704...107,861,259
JBrowse link
G Ubb ubiquitin B involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:62,442,329...62,444,037
Ensembl chr11:62,441,997...62,444,039
JBrowse link
G Ubc ubiquitin C involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:125,463,029...125,467,081
Ensembl chr 5:125,463,029...125,467,266
JBrowse link
G Ube2l6 ubiquitin-conjugating enzyme E2L 6 acts_upstream_of_or_within IDA (PMID:15485925) MGI PMID:15485925 NCBI chr 2:84,629,172...84,640,347
Ensembl chr 2:84,629,172...84,640,679
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago3 argonaute RISC catalytic subunit 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:126,220,797...126,323,360
Ensembl chr 4:126,225,497...126,323,349
JBrowse link
G Ago4 argonaute RISC catalytic subunit 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:126,383,280...126,427,379
Ensembl chr 4:126,383,334...126,427,265
JBrowse link
G Cnot10 CCR4-NOT transcription complex, subunit 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:114,414,942...114,469,289
Ensembl chr 9:114,414,946...114,469,252
JBrowse link
G Cnot9 CCR4-NOT transcription complex, subunit 9 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:74,545,192...74,570,001
Ensembl chr 1:74,545,217...74,570,001
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IMP
ISO
(MGI:4849882|PMID:21070968) UniProt
MGI
PMID:21070968 GO_REF:0000119 MGI:4834177 MGI:4849882 NCBI chr18:44,513,567...44,558,036
Ensembl chr18:44,513,569...44,558,036
JBrowse link
G Dis3l DIS3 like exosome 3'-5' exoribonuclease involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:64,214,038...64,248,707
Ensembl chr 9:64,214,038...64,248,570
JBrowse link
G Dis3l2 DIS3 like 3'-5' exoribonuclease 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:86,629,646...86,977,819
Ensembl chr 1:86,631,530...86,977,817
JBrowse link
G Dxo decapping exoribonuclease involved_in IMP
ISO
IDA
(MGI:5488528|PMID:23523372)
(MGI:6368104|PMID:28283058)
UniProt
MGI
PMID:23523372 PMID:28283058 GO_REF:0000119 MGI:4834177 MGI:5488528 MGI:6368104 NCBI chr17:35,055,998...35,058,162
Ensembl chr17:35,055,995...35,058,209
JBrowse link
G Hspa1a heat shock protein 1A involved_in ISO (PMID:10205060) UniProt PMID:10205060 NCBI chr17:35,188,335...35,191,132
Ensembl chr17:35,188,166...35,191,132
JBrowse link
G Hspa1b heat shock protein 1B involved_in ISO (PMID:10205060) UniProt PMID:10205060 NCBI chr17:35,175,405...35,178,214
Ensembl chr17:35,175,412...35,178,214
JBrowse link
G Khsrp KH-type splicing regulatory protein acts_upstream_of_or_within IDA (PMID:22844247) MGI PMID:22844247 NCBI chr17:57,328,049...57,338,507
Ensembl chr17:57,328,051...57,338,522
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr17:35,200,830...35,204,867
Ensembl chr17:35,200,838...35,204,867
JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 6:56,678,048...56,681,684
Ensembl chr 6:56,678,048...56,681,695
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 8:79,531,497...79,547,781
Ensembl chr 8:79,531,494...79,547,769
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr10:80,688,659...80,691,043
Ensembl chr10:80,688,655...80,691,043
JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in IMP (MGI:5927282|PMID:28965759) UniProt PMID:28965759 MGI:5927282 NCBI chr 3:123,161,944...123,179,639
Ensembl chr 3:123,161,946...123,179,757
JBrowse link
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in IDA (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr11:74,661,658...74,716,649
Ensembl chr11:74,661,656...74,719,351
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IMP (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:52,532,298...52,548,555
Ensembl chr14:52,532,298...52,542,585
JBrowse link
G Mex3d mex3 RNA binding family member D acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr10:80,216,189...80,223,485
Ensembl chr10:80,216,189...80,223,493
JBrowse link
G Mir144 microRNA 144 involved_in IGI (PMID:30971389) MGI PMID:30971389 NCBI chr11:77,963,831...77,963,896
Ensembl chr11:77,963,831...77,963,896
JBrowse link
G Mir451a microRNA 451a involved_in IGI (PMID:30971389) MGI PMID:30971389 NCBI chr11:77,963,996...77,964,067
Ensembl chr11:77,963,996...77,964,067
JBrowse link
G Mir451b microRNA 451b involved_in IGI (PMID:30971389) MGI PMID:30971389 NCBI chr11:77,963,996...77,964,067
Ensembl chr11:77,963,996...77,964,067
JBrowse link
G Mirlet7b microRNA let7b acts_upstream_of_or_within IGI (PMID:22844247) MGI PMID:22844247 NCBI chr15:85,591,520...85,591,604
Ensembl chr15:85,591,520...85,591,604
JBrowse link
G Mirlet7c-1 microRNA let7c-1 acts_upstream_of_or_within IGI (PMID:22844247) MGI PMID:22844247 NCBI chr16:77,396,545...77,396,638
Ensembl chr16:77,396,545...77,396,638
JBrowse link
G Mirlet7c-2 microRNA let7c-2 acts_upstream_of_or_within IGI (PMID:22844247) MGI PMID:22844247 NCBI chr15:85,590,804...85,590,898
Ensembl chr15:85,590,804...85,590,898
JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in IMP (MGI:4431145|PMID:20133598) UniProt PMID:20133598 MGI:4431145 NCBI chr 7:18,721,449...18,722,887
Ensembl chr 7:18,721,325...18,722,887
JBrowse link
G Nudt12 nudix hydrolase 12 involved_in IDA (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chr17:59,307,104...59,320,317
Ensembl chr17:59,306,613...59,320,367
JBrowse link
G Nudt16 nudix hydrolase 16 involved_in IMP
IBA
ISO
(MGI:4849882|PMID:21070968) UniProt
GO_Central
MGI
PMID:21070968 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:4849882 NCBI chr 9:105,006,531...105,010,332
Ensembl chr 9:105,006,102...105,009,023
JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:4,756,975...4,758,892
Ensembl chr16:4,756,625...4,758,896
JBrowse link
G Nudt16l2 nudix hydrolase 16 like 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:105,020,543...105,022,281
Ensembl chr 9:105,020,541...105,022,291
JBrowse link
G Parn poly(A)-specific ribonuclease (deadenylation nuclease) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:13,355,828...13,486,035
Ensembl chr16:13,355,824...13,486,034
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:29,080,236...29,112,010
Ensembl chr11:29,080,744...29,111,828
JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:34,484,168...34,495,392
Ensembl chr15:34,484,167...34,495,401
JBrowse link
G Slfn14 schlafen 14 involved_in IDA
IBA
ISO
(MGI:5705207|PMID:25996083) UniProt
GO_Central
MGI
PMID:25996083 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5705207 NCBI chr11:83,165,936...83,177,552
Ensembl chr11:83,165,936...83,177,552
JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:28,480,332...28,935,161
Ensembl chr 6:28,475,138...28,935,161
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 involved_in IMP
ISO
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673) UniProt
MGI
PMID:29855337 PMID:30065315 PMID:30150673 GO_REF:0000119 MGI:4834177 MGI:6316439 MGI:6316688 MGI:6317061 NCBI chr 4:131,912,227...131,939,567
Ensembl chr 4:131,912,223...131,939,614
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in IDA (MGI:5706859|PMID:26000482) UniProt PMID:26000482 MGI:5706859 NCBI chr 4:125,012,207...125,021,674
Ensembl chr 4:125,012,216...125,021,633
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D acts_upstream_of_or_within IMP (PMID:24415781) MGI PMID:24415781 NCBI chr10:7,708,087...7,746,161
Ensembl chr10:7,708,234...7,746,160
JBrowse link
G Zfp36 zinc finger protein 36 involved_in
acts_upstream_of_or_within
ISO (PMID:10751406), (PMID:11782475) MGI PMID:10751406 PMID:11782475 GO_REF:0000119 MGI:4834177 NCBI chr 7:28,076,208...28,078,680
Ensembl chr 7:28,076,209...28,079,678
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO (PMID:10751406) MGI PMID:10751406 NCBI chr12:80,154,534...80,159,787
Ensembl chr12:80,154,528...80,159,787
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in IDA
ISO
(MGI:5320815|PMID:22367205) UniProt
MGI
PMID:22367205 GO_REF:0000119 MGI:4834177 MGI:5320815 NCBI chr17:84,491,352...84,495,375
Ensembl chr17:84,491,359...84,495,375
JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within IDA (PMID:1370712) MGI PMID:1370712 NCBI chr15:57,558,063...57,703,228
Ensembl chr15:57,558,061...57,703,228
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase involved_in IMP
ISO
(MGI:7441422|PMID:36859428) UniProt
MGI
PMID:36859428 GO_REF:0000119 MGI:4834177 MGI:7441422 NCBI chr11:60,428,509...60,449,338
Ensembl chr11:60,427,207...60,449,338
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:90,770,604...90,849,842
Ensembl chr 2:90,770,727...90,849,842
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within IMP (PMID:17452450) MGI PMID:17452450 NCBI chr 5:96,218,192...96,312,044
Ensembl chr 5:96,218,192...96,312,030
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO RGD
MGI
PMID:26682942 GO_REF:0000096 MGI:4417868 RGD:329961560 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413
JBrowse link
G Fto FTO alpha-ketoglutarate dependent dioxygenase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:92,039,995...92,395,061
Ensembl chr 8:92,040,153...92,395,067
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:34,074,133...34,124,129
Ensembl chr 3:34,074,092...34,124,471
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in IMP (MGI:5141571|PMID:21658585) UniProt PMID:21658585 MGI:5141571 NCBI chr11:69,523,788...69,544,123
Ensembl chr11:69,523,816...69,544,123
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:87,254,653...87,378,532
Ensembl chr 1:87,254,720...87,378,518
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R involved_in ISO RGD
MGI
PMID:15798208 GO_REF:0000096 MGI:4417868 RGD:9854643 NCBI chr 4:136,038,230...136,086,758
Ensembl chr 4:136,038,253...136,086,758
JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in IMP (MGI:5559905|PMID:24394384), (MGI:5927282|PMID:28965759) UniProt PMID:24394384 PMID:28965759 MGI:5559905 MGI:5927282 NCBI chr 3:123,161,944...123,179,639
Ensembl chr 3:123,161,946...123,179,757
JBrowse link
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in IDA (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr11:74,661,658...74,716,649
Ensembl chr11:74,661,656...74,719,351
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IMP (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:52,532,298...52,548,555
Ensembl chr14:52,532,298...52,542,585
JBrowse link
G Mex3d mex3 RNA binding family member D involved_in NAS (MGI:5009173|PMID:14769789) BHF-UCL PMID:14769789 MGI:5009173 NCBI chr10:80,216,189...80,223,485
Ensembl chr10:80,216,189...80,223,493
JBrowse link
G Mir144 microRNA 144 involved_in IGI (PMID:30971389) MGI PMID:30971389 NCBI chr11:77,963,831...77,963,896
Ensembl chr11:77,963,831...77,963,896
JBrowse link
G Mir451a microRNA 451a involved_in IGI (PMID:30971389) MGI PMID:30971389 NCBI chr11:77,963,996...77,964,067
Ensembl chr11:77,963,996...77,964,067
JBrowse link
G Mir451b microRNA 451b involved_in IGI (PMID:30971389) MGI PMID:30971389 NCBI chr11:77,963,996...77,964,067
Ensembl chr11:77,963,996...77,964,067
JBrowse link
G Pum1 pumilio RNA-binding family member 1 involved_in IDA (MGI:5640888|PMID:25768905) UniProt PMID:25768905 MGI:5640888 NCBI chr 4:130,390,509...130,508,875
Ensembl chr 4:130,390,632...130,508,875
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:46,571,664...46,584,575
Ensembl chr13:46,571,910...46,584,571
JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:34,484,168...34,495,392
Ensembl chr15:34,484,167...34,495,401
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IMP (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr18:10,064,401...10,182,225
Ensembl chr18:10,064,401...10,182,045
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IMP (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr12:16,944,808...17,038,275
Ensembl chr12:16,944,896...17,037,824
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein 1 involved_in IMP
IBA
ISO
(MGI:6490006|PMID:32943573) UniProt
GO_Central
MGI
PMID:32943573 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6490006 NCBI chr 2:180,546,170...180,562,729
Ensembl chr 2:180,546,170...180,562,742
JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 involved_in IMP
IBA
ISO
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673), (MGI:6490006|PMID:32943573), (MGI:6508516|PMID:31959747) UniProt
GO_Central
MGI
PMID:29855337 PMID:30065315 PMID:30150673 PMID:31959747 PMID:32943573 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6316439 MGI:6316688 MGI:6317061 MGI:6490006 MGI:6508516 NCBI chr 4:131,912,227...131,939,567
Ensembl chr 4:131,912,223...131,939,614
JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein 3 involved_in IMP
IBA
ISO
(MGI:6490006|PMID:32943573) UniProt
GO_Central
MGI
PMID:32943573 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6490006 NCBI chr 3:16,237,309...16,271,201
Ensembl chr 3:16,237,376...16,271,201
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 acts_upstream_of_or_within IDA (PMID:15480992) MGI PMID:15480992 NCBI chr 6:122,554,755...122,580,068
Ensembl chr 6:122,554,751...122,579,403
JBrowse link
G Axin2 axin 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609
JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,001,824...80,008,620
Ensembl chr10:80,001,819...80,008,620
JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:22844247) MGI PMID:22844247 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:36,896,724...36,899,267
Ensembl chr18:36,896,724...36,899,267
JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:3,152,344...3,194,588
Ensembl chr11:3,152,392...3,194,588
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
IDA
IMP
ISO
(MGI:5922838|PMID:27609837)
(PMID:14976220), (PMID:21613615)
(PMID:21613615)
(MGI:5559905|PMID:24394384)
CACAO
MGI
UniProt
PMID:14976220 PMID:21613615 PMID:24394384 PMID:27609837 GO_REF:0000119 MGI:4834177 MGI:5559905 MGI:5922838 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413
JBrowse link
G Fus fused in sarcoma acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chr 7:127,565,276...127,581,204
Ensembl chr 7:127,566,629...127,584,873
JBrowse link
G Gdnf glial cell line derived neurotrophic factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 5:100,103,794...100,126,926
Ensembl chr 5:100,103,794...100,126,797
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:178,148,673...178,170,063
Ensembl chr 1:178,148,673...178,165,362
JBrowse link
G Ikbke inhibitor of kappaB kinase epsilon involved_in IMP (PMID:21822257) MGI PMID:21822257 NCBI chr 1:131,182,337...131,207,339
Ensembl chr 1:131,182,080...131,207,344
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:57,899,711...57,952,860
Ensembl chr11:57,899,890...57,952,860
JBrowse link
G Mapkapk2 MAP kinase-activated protein kinase 2 acts_upstream_of_or_within IMP (PMID:11741878) MGI PMID:11741878 NCBI chr 1:130,981,437...131,025,580
Ensembl chr 1:130,981,437...131,025,563
JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in IMP
IBA
(MGI:5770021|PMID:26742488) UniProt
GO_Central
PMID:26742488 GO_REF:0000033 MGI:5770021 NCBI chr11:102,556,177...102,573,066
Ensembl chr11:102,554,542...102,573,063
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO RGD
MGI
PMID:21073857 GO_REF:0000096 MGI:4417868 RGD:10040969 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140
JBrowse link
G Noct nocturnin involved_in IMP (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chr 3:51,131,868...51,159,075
Ensembl chr 3:51,131,868...51,159,065
JBrowse link
G Nrde2 nrde-2 necessary for RNA interference, domain containing involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:100,091,709...100,126,981
Ensembl chr12:100,091,711...100,125,912
JBrowse link
G Qki quaking, KH domain containing RNA binding involved_in ISO
IDA
(MGI:7539456|PMID:32732889) RGD
MGI
UniProt
PMID:16855020 PMID:32732889 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:7539456 RGD:10045995 NCBI chr17:10,425,480...10,538,706
Ensembl chr17:10,421,530...10,538,783
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in ISO RGD
MGI
PMID:19508861 GO_REF:0000096 MGI:4417868 RGD:151667451 NCBI chr  X:20,483,596...20,517,128
Ensembl chr  X:20,483,742...20,517,140
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:46,571,664...46,584,575
Ensembl chr13:46,571,910...46,584,571
JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within IDA (PMID:25397698) MGI PMID:25397698 NCBI chr 3:82,743,828...82,783,828
Ensembl chr 3:82,744,535...82,783,790
JBrowse link
G Slc11a1 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 acts_upstream_of_or_within IMP (PMID:9009318) MGI PMID:9009318 NCBI chr 1:74,414,318...74,429,974
Ensembl chr 1:74,414,354...74,425,221
JBrowse link
G Srsf1 serine and arginine-rich splicing factor 1 involved_in IDA
IMP
(PMID:21822258) MGI PMID:21822258 NCBI chr11:87,937,325...87,944,583
Ensembl chr11:87,938,199...87,944,581
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chr11:83,363,897...83,397,569
Ensembl chr11:83,363,912...83,397,569
JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:85,202,492...85,209,203
Ensembl chr 9:85,202,492...85,209,401
JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:133,207,444...133,215,251
Ensembl chr 4:133,207,443...133,215,249
JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in IMP
IBA
ISO
(MGI:5926094|PMID:28931820) UniProt
GO_Central
MGI
PMID:28931820 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5926094 NCBI chr 3:100,375,373...100,396,508
Ensembl chr 3:100,358,944...100,396,640
JBrowse link
G Tent5d terminal nucleotidyltransferase 5D involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:106,836,196...106,916,517
Ensembl chr  X:106,836,196...106,916,515
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:126,057,875...126,096,548
Ensembl chr 4:126,057,875...126,096,553
JBrowse link
G Traf2 TNF receptor-associated factor 2 involved_in IMP (PMID:21822258) MGI PMID:21822258 NCBI chr 2:25,407,994...25,436,952
Ensembl chr 2:25,407,994...25,436,952
JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 involved_in IDA
IMP
(PMID:17785852)
(PMID:21822258)
MGI PMID:17785852 PMID:21822258 NCBI chr10:39,488,930...39,531,303
Ensembl chr10:39,488,930...39,531,303
JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in IMP (PMID:21822258) MGI PMID:21822258 NCBI chr 1:191,729,164...191,776,899
Ensembl chr 1:191,729,166...191,776,868
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO RGD
MGI
PMID:12881220 GO_REF:0000096 MGI:4417868 RGD:1580563 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
JBrowse link
G Ybx1 Y box protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:119,134,524...119,153,462
Ensembl chr 4:119,135,178...119,151,801
JBrowse link
G Ybx2 Y box protein 2 acts_upstream_of_or_within IMP (PMID:17035640) MGI PMID:17035640 NCBI chr11:69,826,652...69,832,430
Ensembl chr11:69,826,622...69,832,431
JBrowse link
G Zar1 zygote arrest 1 involved_in IDA (PMID:36264786) UniProt PMID:36264786 NCBI chr 5:72,734,457...72,738,427
Ensembl chr 5:72,734,149...72,738,597
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:74,661,658...74,716,649
Ensembl chr11:74,661,656...74,719,351
JBrowse link
G Qki quaking, KH domain containing RNA binding involved_in IMP (MGI:6384430|PMID:31868295) UniProt PMID:31868295 MGI:6384430 NCBI chr17:10,425,480...10,538,706
Ensembl chr17:10,421,530...10,538,783
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor, alpha subunit involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:15572351)
(PMID:10601318), (PMID:14663139)
MGI PMID:10601318 PMID:14663139 PMID:15572351 GO_REF:0000119 MGI:4834177 NCBI chr 4:149,188,599...149,205,110
Ensembl chr 4:149,188,603...149,205,104
JBrowse link
G Dffb DNA fragmentation factor, beta subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:154,048,904...154,059,578
Ensembl chr 4:154,048,906...154,059,583
JBrowse link
G Mir146 microRNA 146 involved_in ISO (PMID:28433754) ARUK-UCL PMID:28433754 NCBI chr11:43,265,224...43,265,288
Ensembl chr11:43,265,224...43,265,288
JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 involved_in ISO RGD
MGI
PMID:27184051 GO_REF:0000096 MGI:4417868 RGD:13781945 NCBI chr 4:149,552,026...149,569,667
Ensembl chr 4:149,552,029...149,569,659
JBrowse link
G Pam16 presequence translocase-asssociated motor 16 ISO RGD PMID:24069394 RGD:13462066 NCBI chr16:4,434,330...4,442,810
Ensembl chr16:4,434,328...4,442,852
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in IMP
ISO
(MGI:5700310|PMID:12505983) ParkinsonsUK-UCL
MGI
PMID:12505983 GO_REF:0000119 MGI:4834177 MGI:5700310 NCBI chr 2:164,674,792...164,682,952
Ensembl chr 2:164,674,793...164,682,952
JBrowse link
G Snca synuclein, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:60,708,557...60,806,839
Ensembl chr 6:60,708,559...60,806,839
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:3,152,344...3,194,588
Ensembl chr11:3,152,392...3,194,588
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin involved_in ISO RGD
MGI
PMID:2001740 GO_REF:0000096 MGI:4417868 RGD:9590215 NCBI chr  X:20,413,980...20,428,328
Ensembl chr  X:20,416,026...20,428,328
JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:148,713,642...148,717,432
Ensembl chr 2:148,713,642...148,717,612
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in IMP (MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:3813160 NCBI chr 7:97,375,586...97,387,454
Ensembl chr 7:97,373,213...97,387,496
JBrowse link
G Sgta small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,879,905...80,896,105
Ensembl chr10:80,879,909...80,896,015
JBrowse link
G Svip small VCP/p97-interacting protein involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr 7:51,646,909...51,655,766
Ensembl chr 7:51,646,919...51,655,766
JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:8,848,912...8,853,030
Ensembl chr19:8,848,860...8,853,227
JBrowse link
G Ubxn2a UBX domain protein 2A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:4,926,814...4,957,749
Ensembl chr12:4,929,032...4,957,705
JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:9,993,615...10,030,149
Ensembl chr18:9,993,066...10,045,119
JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:76,810,573...76,913,671
Ensembl chr16:76,810,594...76,913,668
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenergic receptor, alpha 1b acts_upstream_of_or_within IMP (PMID:14581480) MGI PMID:14581480 NCBI chr11:43,665,432...43,792,076
Ensembl chr11:43,665,433...43,792,037
JBrowse link
G Ins1 insulin I involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914
JBrowse link
G Ins2 insulin II involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118
JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in IMP (MGI:5446858|PMID:22848640) BHF-UCL PMID:22848640 MGI:5446858 NCBI chr 9:69,360,978...69,399,074
Ensembl chr 9:69,360,902...69,399,077
JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:80,038,942...80,055,188
Ensembl chr 7:80,038,333...80,055,184
JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal-associated protein transmembrane 4B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:34,238,279...34,284,448
Ensembl chr15:34,238,174...34,284,448
JBrowse link
G Mgat3 mannoside acetylglucosaminyltransferase 3 acts_upstream_of_or_within IMP (PMID:25592972), (PMID:26467158) MGI PMID:25592972 PMID:26467158 NCBI chr15:80,057,852...80,099,720
Ensembl chr15:80,057,922...80,099,720
JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:126,549,280...126,601,234
Ensembl chr 2:126,549,248...126,601,217
JBrowse link
G