Mir326 (microRNA 326) - Rat Genome Database

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Gene: Mir326 (microRNA 326) Mus musculus
Analyze
Symbol: Mir326
Name: microRNA 326
RGD ID: 1608212
MGI Page MGI
Description: Acts upstream of or within positive regulation of T-helper 17 cell differentiation; regulation of gene expression; and sensory perception of sound. Part of RISC complex. Is expressed in alimentary system; appendicular skeleton; and pelvic girdle skeleton. Orthologous to human MIR326 (microRNA 326).
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: mir-326; Mirn; Mirn326; mmu-mir-3; mmu-mir-326
RGD Orthologs
Human
Rat
Dog
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39799,201,476 - 99,201,570 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl799,201,476 - 99,201,570 (+)EnsemblGRCm39 Ensembl
GRCm38799,552,269 - 99,552,363 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl799,552,269 - 99,552,363 (+)EnsemblGRCm38mm10GRCm38
MGSCv377106,700,779 - 106,700,873 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera799,877,151 - 99,877,245 (+)NCBICelera
Cytogenetic Map7E1NCBI
cM Map754.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
RISC complex  (IDA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MicroRNA-9 regulates fetal alcohol-induced changes in D2 receptor to promote prolactin production. Gangisetty O, etal., J Endocrinol. 2017 Oct;235(1):1-14. doi: 10.1530/JOE-17-0135. Epub 2017 Jul 14.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16381832   PMID:17369397   PMID:17604727   PMID:17936263   PMID:19838199   PMID:20215419   PMID:20413612   PMID:21037258   PMID:21267068   PMID:21822254   PMID:22144232   PMID:23185045  
PMID:23646144   PMID:24617895   PMID:26107383   PMID:26773046   PMID:28748390   PMID:29181619   PMID:31135066   PMID:31270675   PMID:31385301   PMID:31972179   PMID:34294127   PMID:35647205  
PMID:35729559   PMID:36749538   PMID:37426487   PMID:38043702   PMID:38157698   PMID:38909535  


Genomics

Comparative Map Data
Mir326
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39799,201,476 - 99,201,570 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl799,201,476 - 99,201,570 (+)EnsemblGRCm39 Ensembl
GRCm38799,552,269 - 99,552,363 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl799,552,269 - 99,552,363 (+)EnsemblGRCm38mm10GRCm38
MGSCv377106,700,779 - 106,700,873 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera799,877,151 - 99,877,245 (+)NCBICelera
Cytogenetic Map7E1NCBI
cM Map754.1NCBI
MIR326
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381175,335,092 - 75,335,186 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1175,335,092 - 75,335,186 (-)EnsemblGRCh38hg38GRCh38
GRCh371175,046,136 - 75,046,230 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361174,723,783 - 74,723,877 (-)NCBINCBI36Build 36hg18NCBI36
Celera1172,352,689 - 72,352,783 (-)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1171,343,379 - 71,343,473 (-)NCBIHuRef
CHM1_11174,929,706 - 74,929,800 (-)NCBICHM1_1
T2T-CHM13v2.01175,264,687 - 75,264,781 (-)NCBIT2T-CHM13v2.0
Mir326
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81163,266,165 - 163,266,259 (+)NCBIGRCr8
mRatBN7.21153,854,029 - 153,854,123 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1153,854,029 - 153,854,123 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1161,849,938 - 161,850,032 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01169,030,085 - 169,030,179 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01161,903,617 - 161,903,711 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01164,518,401 - 164,518,495 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1164,518,401 - 164,518,495 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01170,722,071 - 170,722,165 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1151,940,711 - 151,940,805 (+)NCBICelera
Cytogenetic Map1q32NCBI
MIR326
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12123,240,463 - 23,240,553 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2123,240,463 - 23,240,553 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2123,006,165 - 23,006,255 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02123,443,489 - 23,443,579 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12123,241,804 - 23,241,894 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02123,438,052 - 23,438,142 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02123,356,030 - 23,356,120 (+)NCBIUU_Cfam_GSD_1.0
MIR326
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl99,581,944 - 9,582,034 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.199,581,944 - 9,582,034 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2910,800,191 - 10,800,281 (-)NCBISscrofa10.2Sscrofa10.2susScr3

Variants

.
Variants in Mir326
1 total Variants
miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:66754
Count of gene targets:19872
Count of transcripts:41906
Interacting mature miRNAs:mmu-miR-326-3p, mmu-miR-326-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80551681114551791Mouse
1301647Elpt_melevated leptin (mouse)Not determined786500186120500329Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
1301937Skull10_mskull morphology 10 (mouse)Not determined791482996125483156Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
1302062Stheal6_msoft tissue heal 6 (mouse)Not determined787043932121044066Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780551681114551791Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1301188Heal6_mwound healing/regeneration 6 (mouse)Not determined787043932121044066Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
27095929Pglq8_mpelvic girdle length QTL 8, 10 week (mouse)787849208108099207Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
13464255Ifvrq2_minfluenza virus resistance QTL 2 (mouse)792500698106455693Mouse
1357664Nba3_mNew Zealand Black autoimmunity 3 (mouse)Not determined791482996125483156Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
13463473Hbbcq4_mhemoglobin concentration QTL 4 (mouse)787043932121044066Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
1301997Cia7_mcollagen induced arthritis QTL 7 (mouse)Not determined785365595112533819Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000083637
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,201,476 - 99,201,570 (+)Ensembl
GRCm38.p6 Ensembl799,552,269 - 99,552,363 (+)Ensembl
RefSeq Acc Id: NR_029760
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,201,476 - 99,201,570 (+)NCBI
GRCm38799,552,269 - 99,552,363 (+)ENTREZGENE
MGSCv377106,700,779 - 106,700,873 (+)RGD
Celera799,877,151 - 99,877,245 (+)RGD
cM Map7 ENTREZGENE
Sequence:
Promoters
RGD ID:8664887
Promoter ID:EPDNEW_M10475
Type:single initiation site
Name:Mir326_1
Description:Mus musculus microRNA 326 , microRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38799,552,350 - 99,552,410EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3619338 AgrOrtholog
Ensembl Genes ENSMUSG00000065571 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083637 ENTREZGENE
MGD MGI:3619338 ENTREZGENE
miRBase MI0000598 ENTREZGENE
NCBI Gene 723840 ENTREZGENE
PhenoGen Mir326 PhenoGen
RNAcentral URS00000AF446 RNACentral
  URS000032B538 RNACentral
  URS0000670596 RNACentral