Pum2 (pumilio RNA-binding family member 2) - Rat Genome Database

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Gene: Pum2 (pumilio RNA-binding family member 2) Mus musculus
Analyze
Symbol: Pum2
Name: pumilio RNA-binding family member 2
RGD ID: 1322258
MGI Page MGI
Description: Enables lncRNA binding activity and pumilio-response element binding activity. Involved in several processes, including adipose tissue development; hair follicle development; and respiratory electron transport chain. Acts upstream of or within post-transcriptional regulation of gene expression and stress granule assembly. Located in cytoplasmic stress granule. Is expressed in several structures, including adipose tissue; alimentary system; brain; genitourinary system; and immune system. Orthologous to human PUM2 (pumilio RNA binding family member 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5730503J23Rik; mKIAA0235; PUM1; pumilio 2; pumilio homolog 2; Pumm; Pumm2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39128,724,092 - 8,802,583 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl128,724,134 - 8,802,581 (+)EnsemblGRCm39 Ensembl
GRCm38128,674,092 - 8,752,583 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl128,674,134 - 8,752,581 (+)EnsemblGRCm38mm10GRCm38
MGSCv37128,680,940 - 8,759,389 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36128,700,689 - 8,776,347 (+)NCBIMGSCv36mm8
Celera129,059,182 - 9,137,555 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map123.92NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11780640   PMID:12226475   PMID:12459267   PMID:12477932   PMID:12511597   PMID:12520002   PMID:12667987  
PMID:12904583   PMID:14610273   PMID:15489334   PMID:15617101   PMID:15741177   PMID:16033648   PMID:16041388   PMID:16141072   PMID:16141073   PMID:16775137   PMID:17219433   PMID:17768378  
PMID:17967808   PMID:18089289   PMID:18799693   PMID:19540345   PMID:19861488   PMID:20159962   PMID:21267068   PMID:21460039   PMID:21677750   PMID:21865157   PMID:21873635   PMID:22016787  
PMID:22496444   PMID:22645261   PMID:22802532   PMID:22902294   PMID:23892456   PMID:24194600   PMID:25100735   PMID:26391954   PMID:26589352   PMID:27170441   PMID:28378742   PMID:28794184  
PMID:29046322   PMID:29358566   PMID:30181804   PMID:30256721   PMID:30642763   PMID:30735131   PMID:30811992   PMID:31077711   PMID:31138677   PMID:31606248   PMID:31993882   PMID:32198202  
PMID:34133714   PMID:34161769   PMID:34321999   PMID:34445704   PMID:34678304   PMID:35262486   PMID:35338151   PMID:35507203   PMID:35678316   PMID:35997855   PMID:37062520   PMID:37088847  
PMID:37913857  


Genomics

Comparative Map Data
Pum2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39128,724,092 - 8,802,583 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl128,724,134 - 8,802,581 (+)EnsemblGRCm39 Ensembl
GRCm38128,674,092 - 8,752,583 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl128,674,134 - 8,752,581 (+)EnsemblGRCm38mm10GRCm38
MGSCv37128,680,940 - 8,759,389 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36128,700,689 - 8,776,347 (+)NCBIMGSCv36mm8
Celera129,059,182 - 9,137,555 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map123.92NCBI
PUM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38220,248,691 - 20,352,253 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl220,248,691 - 20,352,234 (-)EnsemblGRCh38hg38GRCh38
GRCh37220,448,452 - 20,552,014 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36220,311,934 - 20,390,625 (-)NCBINCBI36Build 36hg18NCBI36
Build 34220,370,080 - 20,448,772NCBI
Celera220,311,202 - 20,389,869 (-)NCBICelera
Cytogenetic Map2p24.1NCBI
HuRef220,205,916 - 20,284,863 (-)NCBIHuRef
CHM1_1220,377,810 - 20,456,489 (-)NCBICHM1_1
T2T-CHM13v2.0220,282,228 - 20,385,776 (-)NCBIT2T-CHM13v2.0
Pum2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8637,182,130 - 37,262,223 (+)NCBIGRCr8
mRatBN7.2631,462,879 - 31,542,976 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl631,462,872 - 31,542,976 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx631,755,369 - 31,835,022 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0632,071,224 - 32,150,876 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0631,545,833 - 31,625,481 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0633,786,184 - 33,865,693 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl633,786,197 - 33,865,687 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0643,568,680 - 43,648,168 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4632,153,090 - 32,233,940 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1632,155,891 - 32,236,909 (+)NCBI
Celera630,911,640 - 30,990,191 (+)NCBICelera
Cytogenetic Map6q14NCBI
Pum2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554692,810,573 - 2,886,611 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554692,810,825 - 2,886,911 (-)NCBIChiLan1.0ChiLan1.0
PUM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212106,177,254 - 106,279,760 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A106,181,226 - 106,283,778 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A20,235,169 - 20,337,667 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A20,350,669 - 20,455,002 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A20,350,690 - 20,435,174 (-)Ensemblpanpan1.1panPan2
PUM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11715,258,264 - 15,354,001 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1715,261,389 - 15,354,586 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1715,222,809 - 15,318,215 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01715,410,357 - 15,505,697 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1715,410,373 - 15,483,573 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11715,263,913 - 15,359,250 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01715,270,717 - 15,366,226 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01715,302,293 - 15,398,099 (-)NCBIUU_Cfam_GSD_1.0
Pum2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629259,684,387 - 59,772,333 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649311,067,202 - 11,155,377 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649311,067,318 - 11,154,133 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PUM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3117,883,673 - 117,965,293 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13117,857,930 - 117,965,564 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23125,827,213 - 125,934,624 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PUM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11487,368,288 - 87,473,282 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1487,391,219 - 87,474,676 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604524,751,161 - 24,856,242 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pum2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247382,950,415 - 3,043,011 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247382,951,253 - 3,042,905 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pum2
1738 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:6429
Count of miRNA genes:842
Interacting mature miRNAs:1144
Transcripts:ENSMUST00000020915, ENSMUST00000111122, ENSMUST00000111123, ENSMUST00000163569, ENSMUST00000163730, ENSMUST00000164818, ENSMUST00000165293, ENSMUST00000166965, ENSMUST00000168361, ENSMUST00000169089, ENSMUST00000169177, ENSMUST00000169750, ENSMUST00000170037, ENSMUST00000171418, ENSMUST00000171608, ENSMUST00000178015
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122418579Mouse
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122418579Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122418579Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122418579Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124662697Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124662697Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127920733Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127920733Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130433078Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132758756Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133430339Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1234013434340302Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12365000029749999Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
25394547Skmw75_mskeletal muscle weight 75, gastroc (mouse)12821257610451853Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse

Markers in Region
Pum2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12A1.3UniSTS
cM Map12 UniSTS
D6Got27  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38128,749,428 - 8,749,650UniSTSGRCm38
MGSCv37128,756,234 - 8,756,456UniSTSGRCm37
Celera129,134,608 - 9,134,830UniSTS
Cytogenetic Map12A1.3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001160219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001160220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001160221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001160222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_027670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC110382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC134245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF315590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY027917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC041773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ828592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ124920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000020915   ⟹   ENSMUSP00000020915
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,145 - 8,800,320 (+)Ensembl
GRCm38.p6 Ensembl128,674,145 - 8,750,320 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111122   ⟹   ENSMUSP00000106751
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,224 - 8,802,561 (+)Ensembl
GRCm38.p6 Ensembl128,674,224 - 8,752,561 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111123   ⟹   ENSMUSP00000106752
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,134 - 8,801,454 (+)Ensembl
GRCm38.p6 Ensembl128,674,134 - 8,751,454 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163569   ⟹   ENSMUSP00000131074
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,421 - 8,800,001 (+)Ensembl
GRCm38.p6 Ensembl128,674,421 - 8,750,001 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163730   ⟹   ENSMUSP00000131914
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,765 - 8,763,399 (+)Ensembl
GRCm38.p6 Ensembl128,674,765 - 8,713,399 (+)Ensembl
RefSeq Acc Id: ENSMUST00000164818   ⟹   ENSMUSP00000129243
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,779,147 - 8,798,236 (+)Ensembl
GRCm38.p6 Ensembl128,729,147 - 8,748,236 (+)Ensembl
RefSeq Acc Id: ENSMUST00000165293   ⟹   ENSMUSP00000132170
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,275 - 8,802,557 (+)Ensembl
GRCm38.p6 Ensembl128,674,275 - 8,752,557 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166965   ⟹   ENSMUSP00000130320
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,727,534 - 8,759,490 (+)Ensembl
GRCm38.p6 Ensembl128,677,534 - 8,709,490 (+)Ensembl
RefSeq Acc Id: ENSMUST00000168361   ⟹   ENSMUSP00000128292
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,681 - 8,802,581 (+)Ensembl
GRCm38.p6 Ensembl128,674,681 - 8,752,581 (+)Ensembl
RefSeq Acc Id: ENSMUST00000169089   ⟹   ENSMUSP00000132122
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,470 - 8,800,028 (+)Ensembl
GRCm38.p6 Ensembl128,674,470 - 8,750,028 (+)Ensembl
RefSeq Acc Id: ENSMUST00000169177
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,259 - 8,757,368 (+)Ensembl
GRCm38.p6 Ensembl128,674,259 - 8,707,368 (+)Ensembl
RefSeq Acc Id: ENSMUST00000169750   ⟹   ENSMUSP00000126876
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,736 - 8,763,630 (+)Ensembl
GRCm38.p6 Ensembl128,674,736 - 8,713,630 (+)Ensembl
RefSeq Acc Id: ENSMUST00000170037   ⟹   ENSMUSP00000127786
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,748,096 - 8,763,913 (+)Ensembl
GRCm38.p6 Ensembl128,698,096 - 8,713,913 (+)Ensembl
RefSeq Acc Id: ENSMUST00000171418   ⟹   ENSMUSP00000126616
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,760,226 - 8,771,797 (+)Ensembl
GRCm38.p6 Ensembl128,710,226 - 8,721,797 (+)Ensembl
RefSeq Acc Id: ENSMUST00000171608
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,793,476 - 8,794,395 (+)Ensembl
GRCm38.p6 Ensembl128,743,476 - 8,744,395 (+)Ensembl
RefSeq Acc Id: ENSMUST00000178015   ⟹   ENSMUSP00000137020
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl128,724,134 - 8,802,581 (+)Ensembl
GRCm38.p6 Ensembl128,674,134 - 8,752,581 (+)Ensembl
RefSeq Acc Id: NM_001160219   ⟹   NP_001153691
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,259 - 8,802,583 (+)NCBI
GRCm38128,674,259 - 8,752,583 (+)NCBI
MGSCv37128,680,940 - 8,759,389 (+)RGD
Celera129,059,182 - 9,137,555 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001160220   ⟹   NP_001153692
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,259 - 8,802,583 (+)NCBI
GRCm38128,674,259 - 8,752,583 (+)NCBI
MGSCv37128,680,940 - 8,759,389 (+)RGD
Celera129,059,182 - 9,137,555 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001160221   ⟹   NP_001153693
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,134 - 8,802,583 (+)NCBI
GRCm38128,674,134 - 8,752,583 (+)ENTREZGENE
MGSCv37128,680,940 - 8,759,389 (+)RGD
Celera129,059,182 - 9,137,555 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001160222   ⟹   NP_001153694
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,134 - 8,802,583 (+)NCBI
GRCm38128,674,134 - 8,752,583 (+)ENTREZGENE
MGSCv37128,680,940 - 8,759,389 (+)RGD
Celera129,059,182 - 9,137,555 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001310519   ⟹   NP_001297448
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,134 - 8,802,583 (+)NCBI
GRCm38128,674,134 - 8,752,583 (+)NCBI
Sequence:
RefSeq Acc Id: NM_030723   ⟹   NP_109648
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,681 - 8,802,583 (+)NCBI
GRCm38128,674,681 - 8,752,583 (+)NCBI
MGSCv37128,680,940 - 8,759,389 (+)RGD
Celera129,059,182 - 9,137,555 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_027670
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,259 - 8,802,583 (+)NCBI
GRCm38128,674,259 - 8,752,583 (+)NCBI
MGSCv37128,680,940 - 8,759,389 (+)RGD
Celera129,059,182 - 9,137,555 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006515277   ⟹   XP_006515340
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,686 - 8,802,561 (+)NCBI
GRCm38128,674,686 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515278   ⟹   XP_006515341
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,700 - 8,802,561 (+)NCBI
GRCm38128,674,733 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515279   ⟹   XP_006515342
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,092 - 8,802,556 (+)NCBI
GRCm38128,674,092 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515280   ⟹   XP_006515343
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515282   ⟹   XP_006515345
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,398 - 8,802,556 (+)NCBI
GRCm38128,674,398 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515283   ⟹   XP_006515346
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,395 - 8,802,556 (+)NCBI
GRCm38128,674,364 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515284   ⟹   XP_006515347
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515285   ⟹   XP_006515348
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315254   ⟹   XP_017170743
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315255   ⟹   XP_017170744
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315256   ⟹   XP_017170745
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315257   ⟹   XP_017170746
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,348 - 8,802,556 (+)NCBI
GRCm38128,674,348 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315258   ⟹   XP_017170747
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315259   ⟹   XP_017170748
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246993   ⟹   XP_030102853
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,740,242 - 8,802,561 (+)NCBI
GRCm38128,692,423 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246994   ⟹   XP_030102854
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,395 - 8,802,556 (+)NCBI
GRCm38128,674,395 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246995   ⟹   XP_030102855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,355 - 8,802,556 (+)NCBI
GRCm38128,674,398 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246996   ⟹   XP_030102856
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,749 - 8,802,561 (+)NCBI
GRCm38128,674,749 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246997   ⟹   XP_030102857
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,802,561 (+)NCBI
GRCm38128,674,217 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030246999   ⟹   XP_030102859
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,378 - 8,802,556 (+)NCBI
GRCm38128,674,364 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247000   ⟹   XP_030102860
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,253 - 8,802,556 (+)NCBI
GRCm38128,674,253 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247001   ⟹   XP_030102861
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,222 - 8,802,561 (+)NCBI
GRCm38128,674,222 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247002   ⟹   XP_030102862
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,398 - 8,802,556 (+)NCBI
GRCm38128,674,398 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247003   ⟹   XP_030102863
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,398 - 8,802,556 (+)NCBI
GRCm38128,674,398 - 8,752,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157680   ⟹   XP_036013573
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,742,508 - 8,802,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157681   ⟹   XP_036013574
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,733 - 8,802,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157682   ⟹   XP_036013575
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,398 - 8,802,556 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157683   ⟹   XP_036013576
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,457 - 8,802,556 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157684   ⟹   XP_036013577
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,366 - 8,802,556 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157685   ⟹   XP_036013578
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,398 - 8,802,556 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157686   ⟹   XP_036013579
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,217 - 8,791,710 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157687   ⟹   XP_036013580
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39128,724,262 - 8,791,710 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001153691 (Get FASTA)   NCBI Sequence Viewer  
  NP_001153692 (Get FASTA)   NCBI Sequence Viewer  
  NP_001153693 (Get FASTA)   NCBI Sequence Viewer  
  NP_001153694 (Get FASTA)   NCBI Sequence Viewer  
  NP_001297448 (Get FASTA)   NCBI Sequence Viewer  
  NP_109648 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515340 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515341 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515342 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515343 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515345 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515346 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515347 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515348 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170743 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170744 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170745 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170746 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170747 (Get FASTA)   NCBI Sequence Viewer  
  XP_017170748 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102853 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102854 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102855 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102856 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102857 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102859 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102860 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102861 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102862 (Get FASTA)   NCBI Sequence Viewer  
  XP_030102863 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013573 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013574 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013575 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013576 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013577 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013578 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013579 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013580 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG31805 (Get FASTA)   NCBI Sequence Viewer  
  AAH13765 (Get FASTA)   NCBI Sequence Viewer  
  AAH41773 (Get FASTA)   NCBI Sequence Viewer  
  AAK21966 (Get FASTA)   NCBI Sequence Viewer  
  BAC65507 (Get FASTA)   NCBI Sequence Viewer  
  BAE24797 (Get FASTA)   NCBI Sequence Viewer  
  BAE36346 (Get FASTA)   NCBI Sequence Viewer  
  BAE37556 (Get FASTA)   NCBI Sequence Viewer  
  EDK98408 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000020915
  ENSMUSP00000020915.4
  ENSMUSP00000106751
  ENSMUSP00000106751.3
  ENSMUSP00000106752
  ENSMUSP00000106752.3
  ENSMUSP00000126616.2
  ENSMUSP00000126876.2
  ENSMUSP00000127786.2
  ENSMUSP00000128292
  ENSMUSP00000128292.2
  ENSMUSP00000129243.2
  ENSMUSP00000130320.2
  ENSMUSP00000131074
  ENSMUSP00000131074.2
  ENSMUSP00000131914.2
  ENSMUSP00000132122
  ENSMUSP00000132122.2
  ENSMUSP00000132170.2
  ENSMUSP00000137020
  ENSMUSP00000137020.2
GenBank Protein Q80U58 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_109648   ⟸   NM_030723
- Peptide Label: isoform 1
- UniProtKB: Q925A0 (UniProtKB/Swiss-Prot),   Q91YW4 (UniProtKB/Swiss-Prot),   Q80UZ9 (UniProtKB/Swiss-Prot),   Q9ERC7 (UniProtKB/Swiss-Prot),   Q80U58 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153693   ⟸   NM_001160221
- Peptide Label: isoform 2
- UniProtKB: Q3UR91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001153694   ⟸   NM_001160222
- Peptide Label: isoform 3
- UniProtKB: Q80U58 (UniProtKB/Swiss-Prot),   Q3TQ29 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001153691   ⟸   NM_001160219
- Peptide Label: isoform 1
- UniProtKB: Q925A0 (UniProtKB/Swiss-Prot),   Q91YW4 (UniProtKB/Swiss-Prot),   Q80UZ9 (UniProtKB/Swiss-Prot),   Q9ERC7 (UniProtKB/Swiss-Prot),   Q80U58 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153692   ⟸   NM_001160220
- Peptide Label: isoform 2
- UniProtKB: Q3UR91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006515342   ⟸   XM_006515279
- Peptide Label: isoform X1
- UniProtKB: Q925A0 (UniProtKB/Swiss-Prot),   Q91YW4 (UniProtKB/Swiss-Prot),   Q80UZ9 (UniProtKB/Swiss-Prot),   Q9ERC7 (UniProtKB/Swiss-Prot),   Q80U58 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006515345   ⟸   XM_006515282
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006515346   ⟸   XM_006515283
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006515347   ⟸   XM_006515284
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_006515348   ⟸   XM_006515285
- Peptide Label: isoform X11
- UniProtKB: Q80U58 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006515343   ⟸   XM_006515280
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006515340   ⟸   XM_006515277
- Peptide Label: isoform X1
- UniProtKB: Q925A0 (UniProtKB/Swiss-Prot),   Q91YW4 (UniProtKB/Swiss-Prot),   Q80UZ9 (UniProtKB/Swiss-Prot),   Q9ERC7 (UniProtKB/Swiss-Prot),   Q80U58 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006515341   ⟸   XM_006515278
- Peptide Label: isoform X1
- UniProtKB: Q925A0 (UniProtKB/Swiss-Prot),   Q91YW4 (UniProtKB/Swiss-Prot),   Q80UZ9 (UniProtKB/Swiss-Prot),   Q9ERC7 (UniProtKB/Swiss-Prot),   Q80U58 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001297448   ⟸   NM_001310519
- Peptide Label: isoform 4
- UniProtKB: Q3TQ29 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017170746   ⟸   XM_017315257
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017170744   ⟸   XM_017315255
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017170747   ⟸   XM_017315258
- Peptide Label: isoform X13
- UniProtKB: Q3TQ29 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017170743   ⟸   XM_017315254
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017170745   ⟸   XM_017315256
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017170748   ⟸   XM_017315259
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_030102857   ⟸   XM_030246997
- Peptide Label: isoform X12
RefSeq Acc Id: XP_030102861   ⟸   XM_030247001
- Peptide Label: isoform X17
RefSeq Acc Id: XP_030102860   ⟸   XM_030247000
- Peptide Label: isoform X15
RefSeq Acc Id: XP_030102859   ⟸   XM_030246999
- Peptide Label: isoform X16
RefSeq Acc Id: XP_030102854   ⟸   XM_030246994
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030102855   ⟸   XM_030246995
- Peptide Label: isoform X9
RefSeq Acc Id: XP_030102863   ⟸   XM_030247003
- Peptide Label: isoform X17
RefSeq Acc Id: XP_030102862   ⟸   XM_030247002
- Peptide Label: isoform X18
RefSeq Acc Id: XP_030102856   ⟸   XM_030246996
- Peptide Label: isoform X11
RefSeq Acc Id: XP_030102853   ⟸   XM_030246993
- Peptide Label: isoform X1
- UniProtKB: Q925A0 (UniProtKB/Swiss-Prot),   Q91YW4 (UniProtKB/Swiss-Prot),   Q80UZ9 (UniProtKB/Swiss-Prot),   Q80U58 (UniProtKB/Swiss-Prot),   Q9ERC7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000106751   ⟸   ENSMUST00000111122
RefSeq Acc Id: ENSMUSP00000106752   ⟸   ENSMUST00000111123
RefSeq Acc Id: ENSMUSP00000129243   ⟸   ENSMUST00000164818
RefSeq Acc Id: ENSMUSP00000127786   ⟸   ENSMUST00000170037
RefSeq Acc Id: ENSMUSP00000137020   ⟸   ENSMUST00000178015
RefSeq Acc Id: ENSMUSP00000131074   ⟸   ENSMUST00000163569
RefSeq Acc Id: ENSMUSP00000131914   ⟸   ENSMUST00000163730
RefSeq Acc Id: ENSMUSP00000130320   ⟸   ENSMUST00000166965
RefSeq Acc Id: ENSMUSP00000020915   ⟸   ENSMUST00000020915
RefSeq Acc Id: ENSMUSP00000126616   ⟸   ENSMUST00000171418
RefSeq Acc Id: ENSMUSP00000132170   ⟸   ENSMUST00000165293
RefSeq Acc Id: ENSMUSP00000132122   ⟸   ENSMUST00000169089
RefSeq Acc Id: ENSMUSP00000128292   ⟸   ENSMUST00000168361
RefSeq Acc Id: ENSMUSP00000126876   ⟸   ENSMUST00000169750
RefSeq Acc Id: XP_036013579   ⟸   XM_036157686
- Peptide Label: isoform X21
RefSeq Acc Id: XP_036013580   ⟸   XM_036157687
- Peptide Label: isoform X22
RefSeq Acc Id: XP_036013577   ⟸   XM_036157684
- Peptide Label: isoform X20
RefSeq Acc Id: XP_036013575   ⟸   XM_036157682
- Peptide Label: isoform X19
RefSeq Acc Id: XP_036013578   ⟸   XM_036157685
- Peptide Label: isoform X20
RefSeq Acc Id: XP_036013576   ⟸   XM_036157683
- Peptide Label: isoform X19
RefSeq Acc Id: XP_036013574   ⟸   XM_036157681
- Peptide Label: isoform X13
- UniProtKB: Q3TQ29 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036013573   ⟸   XM_036157680
- Peptide Label: isoform X2
- UniProtKB: Q3UR91 (UniProtKB/TrEMBL)
Protein Domains
PUM-HD

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80U58-F1-model_v2 AlphaFold Q80U58 1-1066 view protein structure

Promoters
RGD ID:8677888
Promoter ID:EPDNEW_M16975
Type:multiple initiation site
Name:Pum2_1
Description:Mus musculus pumilio RNA-binding family member 2 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16976  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38128,674,253 - 8,674,313EPDNEW
RGD ID:8677890
Promoter ID:EPDNEW_M16976
Type:initiation region
Name:Pum2_2
Description:Mus musculus pumilio RNA-binding family member 2 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16975  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38128,674,739 - 8,674,799EPDNEW
RGD ID:6823300
Promoter ID:MM_KWN:11132
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000020915,   ENSMUST00000111122,   NM_001160219,   NM_001160220,   NM_001160221,   NM_001160222,   NM_030723,   NR_027670,   UC007MZV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36128,680,206 - 8,681,387 (+)MPROMDB
RGD ID:6847000
Promoter ID:MM_ACW:9863
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day6
Transcripts:PUM2.NSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36128,749,936 - 8,750,436 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1931751 AgrOrtholog
Ensembl Genes ENSMUSG00000020594 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020915 ENTREZGENE
  ENSMUST00000020915.10 UniProtKB/TrEMBL
  ENSMUST00000111122 ENTREZGENE
  ENSMUST00000111122.9 UniProtKB/TrEMBL
  ENSMUST00000111123 ENTREZGENE
  ENSMUST00000111123.9 UniProtKB/TrEMBL
  ENSMUST00000163569 ENTREZGENE
  ENSMUST00000163569.8 UniProtKB/Swiss-Prot
  ENSMUST00000163730.8 UniProtKB/TrEMBL
  ENSMUST00000164818.3 UniProtKB/TrEMBL
  ENSMUST00000165293 ENTREZGENE
  ENSMUST00000165293.8 UniProtKB/TrEMBL
  ENSMUST00000166965.2 UniProtKB/TrEMBL
  ENSMUST00000168361 ENTREZGENE
  ENSMUST00000168361.8 UniProtKB/Swiss-Prot
  ENSMUST00000169089 ENTREZGENE
  ENSMUST00000169089.8 UniProtKB/Swiss-Prot
  ENSMUST00000169750.8 UniProtKB/TrEMBL
  ENSMUST00000170037.2 UniProtKB/TrEMBL
  ENSMUST00000171418.3 UniProtKB/TrEMBL
  ENSMUST00000178015 ENTREZGENE
  ENSMUST00000178015.8 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PUM-HD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pumilio_RNA-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pumilio_RNA-bd_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:80913 UniProtKB/Swiss-Prot
MGD MGI:1931751 ENTREZGENE
NCBI Gene 80913 ENTREZGENE
PANTHER PUMILIO HOMOLOG 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNA BINDING PROTEIN PUMILIO-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PUF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pum2 PhenoGen
PROSITE PUM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PUM_HD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Pumilio UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E9PW51_MOUSE UniProtKB/TrEMBL
  E9Q0P1_MOUSE UniProtKB/TrEMBL
  E9Q4Q6_MOUSE UniProtKB/TrEMBL
  E9Q765_MOUSE UniProtKB/TrEMBL
  F6YD01_MOUSE UniProtKB/TrEMBL
  F7A034_MOUSE UniProtKB/TrEMBL
  PUM2_MOUSE UniProtKB/Swiss-Prot
  Q3TQ29 ENTREZGENE, UniProtKB/TrEMBL
  Q3TTH9_MOUSE UniProtKB/TrEMBL
  Q3UR91 ENTREZGENE, UniProtKB/TrEMBL
  Q80U58 ENTREZGENE
  Q80UZ9 ENTREZGENE
  Q91YW4 ENTREZGENE
  Q925A0 ENTREZGENE
  Q9ERC7 ENTREZGENE
UniProt Secondary Q80UZ9 UniProtKB/Swiss-Prot
  Q91YW4 UniProtKB/Swiss-Prot
  Q925A0 UniProtKB/Swiss-Prot
  Q9ERC7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-05-27 Pum2  pumilio RNA-binding family member 2    pumilio 2 (Drosophila)  Symbol and/or name change 5135510 APPROVED