Cdc27 (cell division cycle 27) - Rat Genome Database

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Gene: Cdc27 (cell division cycle 27) Mus musculus
Analyze
Symbol: Cdc27
Name: cell division cycle 27
RGD ID: 1312640
MGI Page MGI
Description: Predicted to enable protein phosphatase binding activity. Predicted to be involved in cell division; cellular protein metabolic process; and regulation of mitotic sister chromatid separation. Predicted to be located in centrosome; mitotic spindle; and nucleoplasm. Predicted to be part of anaphase-promoting complex. Predicted to be active in cytoplasm. Is expressed in head. Orthologous to human CDC27 (cell division cycle 27); PARTICIPATES IN cell cycle pathway, mitotic; ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI452358; AP; APC3; BC023187; cell division cycle 27 homolog; cell division cycle protein 27 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911104,393,350 - 104,441,446 (-)NCBIGRCm39mm39
GRCm39 Ensembl11104,393,571 - 104,441,446 (-)Ensembl
GRCm3811104,502,524 - 104,550,620 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11104,502,745 - 104,550,620 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711104,363,838 - 104,411,934 (-)NCBIGRCm37mm9NCBIm37
MGSCv3611104,318,606 - 104,376,937 (-)NCBImm8
Celera11116,230,588 - 116,278,484 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1167.79NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8234252   PMID:10349636   PMID:10922056   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11179223   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:12520002  
PMID:12904583   PMID:14610273   PMID:15029244   PMID:15329828   PMID:15489334   PMID:15542852   PMID:15690355   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17215516   PMID:18799693  
PMID:19468303   PMID:20360068   PMID:20439707   PMID:21267068   PMID:21460039   PMID:21873635   PMID:22014574   PMID:22084091   PMID:22898775   PMID:25913861   PMID:26206133   PMID:28190767  
PMID:32434143  


Genomics

Comparative Map Data
Cdc27
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911104,393,350 - 104,441,446 (-)NCBIGRCm39mm39
GRCm39 Ensembl11104,393,571 - 104,441,446 (-)Ensembl
GRCm3811104,502,524 - 104,550,620 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11104,502,745 - 104,550,620 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711104,363,838 - 104,411,934 (-)NCBIGRCm37mm9NCBIm37
MGSCv3611104,318,606 - 104,376,937 (-)NCBImm8
Celera11116,230,588 - 116,278,484 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1167.79NCBI
CDC27
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1747,117,703 - 47,189,422 (-)EnsemblGRCh38hg38GRCh38
GRCh381747,117,703 - 47,189,295 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371745,195,069 - 45,266,661 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361742,552,625 - 42,621,664 (-)NCBINCBI36hg18NCBI36
Build 341742,552,624 - 42,621,664NCBI
Celera1741,645,340 - 41,716,724 (-)NCBI
Cytogenetic Map17q21.32NCBI
HuRef1740,572,496 - 40,644,750 (-)NCBIHuRef
CHM1_11745,260,254 - 45,331,607 (-)NCBICHM1_1
Cdc27
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21089,400,931 - 89,449,823 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1089,400,940 - 89,449,736 (-)Ensembl
Rnor_6.01092,551,754 - 92,602,214 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1092,554,081 - 92,602,082 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01092,314,321 - 92,364,553 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41093,678,790 - 93,725,987 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11093,693,161 - 93,740,357 (-)NCBI
Celera1088,097,228 - 88,143,638 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
Cdc27
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554789,927,871 - 10,002,020 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554789,927,871 - 10,002,020 (+)NCBIChiLan1.0ChiLan1.0
CDC27
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11710,473,516 - 10,545,549 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1710,473,646 - 10,545,549 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01710,259,194 - 10,331,011 (+)NCBIMhudiblu_PPA_v0panPan3
CDC27
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.199,281,152 - 9,351,629 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl99,281,196 - 9,348,678 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha910,946,699 - 11,017,232 (-)NCBI
ROS_Cfam_1.0910,870,030 - 10,940,621 (+)NCBI
UMICH_Zoey_3.199,884,169 - 9,954,826 (+)NCBI
UNSW_CanFamBas_1.0917,569,886 - 17,640,242 (-)NCBI
UU_Cfam_GSD_1.0917,516,367 - 17,586,916 (-)NCBI
Cdc27
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560216,432,450 - 16,493,366 (+)NCBI
SpeTri2.0NW_0049365412,700,997 - 2,762,180 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDC27
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1216,810,910 - 16,882,269 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11216,810,868 - 16,882,271 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21216,834,050 - 16,905,448 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CDC27
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11659,497,731 - 59,564,298 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1659,497,713 - 59,564,480 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607730,209,741 - 30,276,471 (+)NCBIVero_WHO_p1.0
Cdc27
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248492,026,433 - 2,105,626 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
BB445827  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811104,502,671 - 104,502,786UniSTSGRCm38
MGSCv3711104,363,985 - 104,364,100UniSTSGRCm37
Celera11116,230,735 - 116,230,850UniSTS
Cytogenetic Map11E1UniSTS
cM Map1163.0UniSTS
Whitehead/MRC_RH111413.43UniSTS
Cdc27  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811104,528,398 - 104,529,423UniSTSGRCm38
MGSCv3711104,389,712 - 104,390,737UniSTSGRCm37
Celera11116,256,330 - 116,257,355UniSTS
Cytogenetic Map11E1UniSTS
cM Map1163.0UniSTS
UniSTS:224940  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811104,522,852 - 104,523,007UniSTSGRCm38
MGSCv3711104,384,166 - 104,384,321UniSTSGRCm37
Celera11116,250,783 - 116,250,938UniSTS
Cytogenetic Map11E1UniSTS
cM Map1163.0UniSTS
AI452358  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811104,502,924 - 104,503,099UniSTSGRCm38
MGSCv3711104,364,238 - 104,364,413UniSTSGRCm37
Celera11116,230,988 - 116,231,163UniSTS
Cytogenetic Map11E1UniSTS
cM Map1163.0UniSTS
Whitehead/MRC_RH111413.2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177546357111546496Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177546357111546496Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177880152111880273Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179265183107725646Mouse
14746970Manh71_mmandible shape 71 (mouse)1179525431113525431Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179922933104611872Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181683655115683810Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181683655115683810Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181919441115919441Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182486872116486994Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185954085119954085Mouse
15039374Adip29_madiposity 29 (mouse)1186717494120717494Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186717494120717494Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186717494120717494Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187600000126900000Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187611774121611872Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189978425122082543Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191713782122082543Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191713782122082543Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1193048547112653728Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193338357122082543Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194172953118131898Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194300000119000000Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94546357118131898Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195513139122082543Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195513139122082543Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196246848122082543Mouse
1301535Pas5b_mpulmonary adenoma susceptibility 5b (mouse)Not determined1196285639108915558Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196919310122082543Mouse
12910539Sstapa3_msuseptibility to Staphylococcus aureus infection 3 (mouse)1197006867110713165Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198461783122082543Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198609643122082543Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199363361122082543Mouse
11553867Stmm5_mskin tumor modifier of MSM 5 (mouse)11100167277122082543Mouse
11341721Rvfs2_mRift Valley fever susceptibility 2 (mouse)11100363360120996339Mouse
1301012Vispl_mvisual placing (mouse)Not determined11101131764122082543Mouse
14700693Ppiq12_mprepulse inhibition QTL 12 (mouse)11101613994114581537Mouse
14700694Ppiq13_mprepulse inhibition QTL 13 (mouse)11101613994114581537Mouse
14700695Ppiq14_mprepulse inhibition QTL 14 (mouse)11101613994114581537Mouse
14700696Ppiq15_mprepulse inhibition QTL 15 (mouse)11101613994114581537Mouse
1300957Pbd1_mpeak bone density 1 (mouse)Not determined11102453297112493297Mouse
4141612Cia40_mcollagen induced arthritis 40 (mouse)Not determined11103383166115130618Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1295
Count of miRNA genes:668
Interacting mature miRNAs:831
Transcripts:ENSMUST00000093923, ENSMUST00000106961, ENSMUST00000106962, ENSMUST00000127506, ENSMUST00000135303
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001285988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001285989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001285990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK039377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL603709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC157955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC172100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC172149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY013739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY036319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000093923   ⟹   ENSMUSP00000091452
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11104,393,571 - 104,441,309 (-)Ensembl
GRCm38.p6 Ensembl11104,502,745 - 104,550,483 (-)Ensembl
RefSeq Acc Id: ENSMUST00000106961   ⟹   ENSMUSP00000102574
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11104,411,080 - 104,441,304 (-)Ensembl
GRCm38.p6 Ensembl11104,520,254 - 104,550,478 (-)Ensembl
RefSeq Acc Id: ENSMUST00000106962   ⟹   ENSMUSP00000102575
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11104,395,763 - 104,441,218 (-)Ensembl
GRCm38.p6 Ensembl11104,504,937 - 104,550,392 (-)Ensembl
RefSeq Acc Id: ENSMUST00000127506
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11104,399,173 - 104,404,102 (-)Ensembl
GRCm38.p6 Ensembl11104,508,347 - 104,513,276 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135303
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11104,422,563 - 104,441,446 (-)Ensembl
GRCm38.p6 Ensembl11104,531,737 - 104,550,620 (-)Ensembl
RefSeq Acc Id: NM_001285988   ⟹   NP_001272917
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,350 - 104,441,446 (-)NCBI
GRCm3811104,502,524 - 104,550,620 (-)NCBI
Celera11116,230,588 - 116,278,484 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001285989   ⟹   NP_001272918
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,350 - 104,441,446 (-)NCBI
GRCm3811104,502,524 - 104,550,620 (-)NCBI
Celera11116,230,588 - 116,278,484 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001285990   ⟹   NP_001272919
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,350 - 104,441,446 (-)NCBI
GRCm3811104,502,524 - 104,550,620 (-)NCBI
Celera11116,230,588 - 116,278,484 (-)NCBI
Sequence:
RefSeq Acc Id: NM_145436   ⟹   NP_663411
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,350 - 104,441,446 (-)NCBI
GRCm3811104,502,524 - 104,550,620 (-)ENTREZGENE
MGSCv3711104,363,838 - 104,411,934 (-)RGD
Celera11116,230,588 - 116,278,484 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533050   ⟹   XP_006533113
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,570 - 104,441,371 (-)NCBI
GRCm3811104,502,740 - 104,550,529 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533052   ⟹   XP_006533115
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,566 - 104,427,496 (-)NCBI
GRCm3811104,502,764 - 104,528,615 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156596   ⟹   XP_036012489
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,566 - 104,441,321 (-)NCBI
RefSeq Acc Id: XM_036156597   ⟹   XP_036012490
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,566 - 104,441,338 (-)NCBI
RefSeq Acc Id: XM_036156598   ⟹   XP_036012491
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,566 - 104,422,619 (-)NCBI
RefSeq Acc Id: XM_036156599   ⟹   XP_036012492
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,563 - 104,427,488 (-)NCBI
RefSeq Acc Id: XM_036156600   ⟹   XP_036012493
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,393,563 - 104,427,488 (-)NCBI
RefSeq Acc Id: XM_036156601   ⟹   XP_036012494
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911104,397,982 - 104,427,488 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_663411   ⟸   NM_145436
- Peptide Label: isoform 2
- UniProtKB: A2A6Q5 (UniProtKB/Swiss-Prot),   Q3TTW1 (UniProtKB/TrEMBL),   Q8BYJ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272919   ⟸   NM_001285990
- Peptide Label: isoform 4
- Sequence:
RefSeq Acc Id: NP_001272918   ⟸   NM_001285989
- Peptide Label: isoform 3
- UniProtKB: Q3TTW1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272917   ⟸   NM_001285988
- Peptide Label: isoform 1
- UniProtKB: A2A6Q5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533115   ⟸   XM_006533052
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006533113   ⟸   XM_006533050
- Peptide Label: isoform X1
- UniProtKB: A2A6Q5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000091452   ⟸   ENSMUST00000093923
RefSeq Acc Id: ENSMUSP00000102575   ⟸   ENSMUST00000106962
RefSeq Acc Id: ENSMUSP00000102574   ⟸   ENSMUST00000106961
RefSeq Acc Id: XP_036012493   ⟸   XM_036156600
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036012492   ⟸   XM_036156599
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036012490   ⟸   XM_036156597
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036012489   ⟸   XM_036156596
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036012491   ⟸   XM_036156598
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036012494   ⟸   XM_036156601
- Peptide Label: isoform X5
Protein Domains
TPR_REGION

Promoters
RGD ID:6821369
Promoter ID:MM_KWN:10140
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000106960,   ENSMUST00000106962,   NM_010858,   NM_145436,   OTTMUST00000006504,   UC007LWR.1,   UC007LWS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611104,411,466 - 104,412,192 (+)MPROMDB
RGD ID:8677008
Promoter ID:EPDNEW_M16535
Type:initiation region
Name:Cdc27_1
Description:Mus musculus cell division cycle 27 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811104,550,512 - 104,550,572EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:102685 AgrOrtholog
Ensembl Genes ENSMUSG00000020687 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000091452 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000102574 UniProtKB/TrEMBL
  ENSMUSP00000102575 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000093923 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000106961 UniProtKB/TrEMBL
  ENSMUST00000106962 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:217232 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:102685 ENTREZGENE
NCBI Gene 217232 ENTREZGENE
Pfam TPR_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cdc27 PhenoGen
PROSITE TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_REGION UniProtKB/Swiss-Prot
SMART TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2A6Q5 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3TTW1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UYS3_MOUSE UniProtKB/TrEMBL
  Q8BYJ1 ENTREZGENE, UniProtKB/TrEMBL
  Q8R568_MOUSE UniProtKB/TrEMBL
UniProt Secondary A2A6Q6 UniProtKB/Swiss-Prot
  B2RXS0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-07-10 Cdc27  cell division cycle 27  Cdc27  cell division cycle 27 homolog (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED