Phka1 (phosphorylase kinase alpha 1) - Rat Genome Database

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Gene: Phka1 (phosphorylase kinase alpha 1) Mus musculus
Analyze
Symbol: Phka1
Name: phosphorylase kinase alpha 1
RGD ID: 733216
MGI Page MGI
Description: Predicted to enable calmodulin binding activity. Predicted to act upstream of or within glycogen metabolic process. Predicted to be located in plasma membrane. Predicted to be part of phosphorylase kinase complex. Is expressed in diencephalon lateral wall mantle layer; heart; and midbrain mantle layer. Used to study glycogen storage disease IXd. Human ortholog(s) of this gene implicated in glycogen storage disease and glycogen storage disease IXd. Orthologous to human PHKA1 (phosphorylase kinase regulatory subunit alpha 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5330411D17; 9830108K24Rik; Ph; Phka; phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform; phosphorylase kinase alpha M subunit
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X101,557,581 - 101,687,907 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX101,557,581 - 101,687,852 (-)EnsemblGRCm39 Ensembl
GRCm38X102,513,975 - 102,644,301 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX102,513,975 - 102,644,246 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X99,709,314 - 99,839,585 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X98,718,393 - 98,846,917 (-)NCBIMGSCv36mm8
CeleraX89,425,232 - 89,555,150 (-)NCBICelera
Cytogenetic MapXDNCBI
cM MapX45.47NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Phosphorylase kinase: the complexity of its regulation is reflected in the complexity of its structure. Brushia RJ and Walsh DA, Front Biosci. 1999 Sep 15;4:D618-41.
2. Muscle glycogenosis with low phosphorylase kinase activity: mutations in PHKA1, PHKG1 or six other candidate genes explain only a minority of cases. Burwinkel B, etal., Eur J Hum Genet. 2003 Jul;11(7):516-26.
3. The content of glycogen phosphorylase and glycogen in preparations of sarcoplasmic reticulum-glycogenolytic complex is enhanced in diabetic rat skeletal muscle. Garduno E, etal., Diabetologia. 2001 Oct;44(10):1238-46.
4. Phosphorylase a formation in protein-glycogen particles isolated from fast-twitch muscle of euthyroid and hypothyroid rats. Leijendekker WJ, etal., Arch Biochem Biophys 1989 Oct;274(1):120-9.
5. MGDs mouse GO annotations MGD data from the GO Consortium
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
8. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
9. Mouse MP Annotation Import Pipeline RGD automated import pipeline
10. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:668698   PMID:1203056   PMID:1372435   PMID:1675191   PMID:1740345   PMID:1772416   PMID:1874721   PMID:1973380   PMID:2034278   PMID:2034279   PMID:2055107   PMID:2602386  
PMID:3472241   PMID:4726088   PMID:5444100   PMID:6020474   PMID:7805729   PMID:7874112   PMID:7874115   PMID:7916682   PMID:8012115   PMID:8226841   PMID:8298647   PMID:8432533  
PMID:8468050   PMID:8468051   PMID:8733133   PMID:9545634   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11945425   PMID:12477932   PMID:13931951   PMID:16141072  
PMID:16141073   PMID:19075228   PMID:21267068   PMID:21677750   PMID:21873635   PMID:27215380   PMID:31040226  


Genomics

Comparative Map Data
Phka1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X101,557,581 - 101,687,907 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX101,557,581 - 101,687,852 (-)EnsemblGRCm39 Ensembl
GRCm38X102,513,975 - 102,644,301 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX102,513,975 - 102,644,246 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X99,709,314 - 99,839,585 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X98,718,393 - 98,846,917 (-)NCBIMGSCv36mm8
CeleraX89,425,232 - 89,555,150 (-)NCBICelera
Cytogenetic MapXDNCBI
cM MapX45.47NCBI
PHKA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X72,578,814 - 72,714,306 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX72,578,814 - 72,714,319 (-)EnsemblGRCh38hg38GRCh38
GRCh37X71,798,664 - 71,934,154 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X71,717,203 - 71,850,612 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X71,583,501 - 71,716,903NCBI
CeleraX72,141,887 - 72,277,747 (-)NCBICelera
Cytogenetic MapXq13.1NCBI
HuRefX65,553,170 - 65,688,660 (-)NCBIHuRef
CHM1_1X71,691,651 - 71,827,294 (-)NCBICHM1_1
T2T-CHM13v2.0X71,011,736 - 71,147,907 (-)NCBIT2T-CHM13v2.0
Phka1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X67,601,302 - 67,738,504 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX67,601,302 - 67,738,455 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX69,084,656 - 69,221,526 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X72,584,887 - 72,721,763 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X70,146,037 - 70,282,911 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X72,377,020 - 72,515,385 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX72,377,021 - 72,515,366 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X73,218,886 - 73,356,004 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X90,553,527 - 90,692,073 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X90,626,959 - 90,765,506 (-)NCBI
CeleraX67,954,686 - 68,091,557 (-)NCBICelera
Cytogenetic MapXq22NCBI
Phka1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547512,020,629 - 12,172,443 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495547512,020,278 - 12,172,427 (-)NCBIChiLan1.0ChiLan1.0
PHKA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1X72,258,746 - 72,389,672 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X61,816,613 - 61,949,179 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X71,900,762 - 72,033,055 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX71,900,762 - 72,033,055 (-)Ensemblpanpan1.1panPan2
PHKA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X56,579,538 - 56,758,293 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX56,581,435 - 56,757,905 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX47,405,712 - 47,585,405 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X57,633,970 - 57,778,843 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX57,633,970 - 57,778,287 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X55,549,695 - 55,732,132 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X56,945,562 - 57,125,410 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X56,794,558 - 56,974,936 (-)NCBIUU_Cfam_GSD_1.0
Phka1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X45,213,224 - 45,321,344 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367621,657,781 - 1,766,605 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049367621,657,778 - 1,766,592 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PHKA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX58,455,939 - 58,583,216 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X58,456,097 - 58,583,216 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X66,182,346 - 66,288,186 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PHKA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X62,397,726 - 62,528,695 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX62,397,739 - 62,528,708 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660654,273,916 - 4,405,596 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Phka1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249032,857,378 - 3,068,534 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249032,859,252 - 3,068,516 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Phka1
2731 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:7020
Count of miRNA genes:663
Interacting mature miRNAs:808
Transcripts:ENSMUST00000043596, ENSMUST00000052012, ENSMUST00000113611, ENSMUST00000119229, ENSMUST00000120270, ENSMUST00000122022, ENSMUST00000142534
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse
1302054Gct4_mgranulosa cell tumorigenesis 4 (mouse)Not determinedX76124336102062720Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse

Markers in Region
X74616  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X102,515,892 - 102,515,993UniSTSGRCm38
MGSCv37X99,711,231 - 99,711,332UniSTSGRCm37
CeleraX89,427,149 - 89,427,250UniSTS
Cytogenetic MapXDUniSTS
cM MapX39.0UniSTS
Whitehead/MRC_RH71342.84UniSTS
Whitehead_YACX UniSTS
G48115  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385134,642,096 - 134,642,318UniSTSGRCm38
GRCm38X102,640,195 - 102,640,444UniSTSGRCm38
MGSCv37X99,835,534 - 99,835,783UniSTSGRCm37
MGSCv375135,117,966 - 135,118,188UniSTSGRCm37
Celera5131,650,136 - 131,650,358UniSTS
CeleraX89,551,178 - 89,551,427UniSTS
Cytogenetic MapXDUniSTS
cM MapX39.0UniSTS
px-17e11  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X102,571,399 - 102,571,581UniSTSGRCm38
MGSCv37X99,766,738 - 99,766,920UniSTSGRCm37
CeleraX89,482,527 - 89,482,709UniSTS
Cytogenetic MapXDUniSTS
cM MapX39.0UniSTS
px-58c11  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X102,602,466 - 102,602,572UniSTSGRCm38
MGSCv37X99,797,805 - 99,797,911UniSTSGRCm37
CeleraX89,513,336 - 89,513,442UniSTS
Cytogenetic MapXDUniSTS
cM MapX39.0UniSTS
px-57e7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X102,571,396 - 102,571,508UniSTSGRCm38
MGSCv37X99,766,735 - 99,766,847UniSTSGRCm37
CeleraX89,482,524 - 89,482,636UniSTS
Cytogenetic MapXDUniSTS
cM MapX39.0UniSTS
X74616  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXDUniSTS
Whitehead/MRC_RH71342.84UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_008832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_173021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036161853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK030426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL732405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL805925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB662994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC104144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY414985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M28867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X73876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X73877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X74616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000043596   ⟹   ENSMUSP00000042778
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX101,557,581 - 101,687,852 (-)Ensembl
GRCm38.p6 EnsemblX102,513,975 - 102,644,246 (-)Ensembl
RefSeq Acc Id: ENSMUST00000052012   ⟹   ENSMUSP00000061991
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX101,557,581 - 101,687,852 (-)Ensembl
GRCm38.p6 EnsemblX102,513,975 - 102,644,246 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113611   ⟹   ENSMUSP00000109241
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX101,557,581 - 101,687,852 (-)Ensembl
GRCm38.p6 EnsemblX102,513,975 - 102,644,246 (-)Ensembl
RefSeq Acc Id: ENSMUST00000119229   ⟹   ENSMUSP00000114066
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX101,557,581 - 101,687,852 (-)Ensembl
GRCm38.p6 EnsemblX102,513,975 - 102,644,246 (-)Ensembl
RefSeq Acc Id: ENSMUST00000120270   ⟹   ENSMUSP00000113302
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX101,557,581 - 101,687,852 (-)Ensembl
GRCm38.p6 EnsemblX102,513,975 - 102,644,246 (-)Ensembl
RefSeq Acc Id: ENSMUST00000122022   ⟹   ENSMUSP00000112529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX101,557,581 - 101,687,852 (-)Ensembl
GRCm38.p6 EnsemblX102,513,975 - 102,644,246 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142534
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX101,598,385 - 101,687,852 (-)Ensembl
GRCm38.p6 EnsemblX102,554,779 - 102,644,246 (-)Ensembl
RefSeq Acc Id: NM_008832   ⟹   NP_032858
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X101,557,581 - 101,687,852 (-)NCBI
GRCm38X102,513,975 - 102,644,246 (-)NCBI
MGSCv37X99,709,314 - 99,839,585 (-)RGD
CeleraX89,425,232 - 89,555,150 (-)RGD
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: NM_173021   ⟹   NP_766609
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X101,557,581 - 101,687,852 (-)NCBI
GRCm38X102,513,975 - 102,644,246 (-)NCBI
MGSCv37X99,709,314 - 99,839,585 (-)RGD
CeleraX89,425,232 - 89,555,150 (-)RGD
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006527894   ⟹   XP_006527957
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X101,557,583 - 101,687,907 (-)NCBI
GRCm38X102,513,976 - 102,644,301 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006527895   ⟹   XP_006527958
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X101,558,405 - 101,687,907 (-)NCBI
GRCm38X102,515,357 - 102,644,301 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161851   ⟹   XP_036017744
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X101,557,583 - 101,687,907 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161852   ⟹   XP_036017745
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X101,558,405 - 101,687,907 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036161853   ⟹   XP_036017746
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X101,558,405 - 101,687,777 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_766609   ⟸   NM_173021
- Peptide Label: isoform 2
- UniProtKB: A2AI91 (UniProtKB/TrEMBL),   Q3TQJ0 (UniProtKB/TrEMBL),   Q3UV91 (UniProtKB/TrEMBL),   Q8CBA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_032858   ⟸   NM_008832
- Peptide Label: isoform 1
- UniProtKB: A2AI90 (UniProtKB/Swiss-Prot),   P18826 (UniProtKB/Swiss-Prot),   A2AI87 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006527958   ⟸   XM_006527895
- Peptide Label: isoform X3
- UniProtKB: A2AI87 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006527957   ⟸   XM_006527894
- Peptide Label: isoform X1
- UniProtKB: A2AI87 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000061991   ⟸   ENSMUST00000052012
RefSeq Acc Id: ENSMUSP00000114066   ⟸   ENSMUST00000119229
RefSeq Acc Id: ENSMUSP00000109241   ⟸   ENSMUST00000113611
RefSeq Acc Id: ENSMUSP00000113302   ⟸   ENSMUST00000120270
RefSeq Acc Id: ENSMUSP00000112529   ⟸   ENSMUST00000122022
RefSeq Acc Id: ENSMUSP00000042778   ⟸   ENSMUST00000043596
RefSeq Acc Id: XP_036017744   ⟸   XM_036161851
- Peptide Label: isoform X2
- UniProtKB: Q8CBA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036017745   ⟸   XM_036161852
- Peptide Label: isoform X4
- UniProtKB: Q8CBA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036017746   ⟸   XM_036161853
- Peptide Label: isoform X5
Protein Domains
GH15-like   Phosphorylase b kinase regulatory subunit alpha/beta

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P18826-F1-model_v2 AlphaFold P18826 1-1241 view protein structure

Promoters
RGD ID:6846088
Promoter ID:MM_KWN:61379
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000113611,   ENSMUST00000119229,   ENSMUST00000120270,   ENSMUST00000122022,   NM_008832,   NM_173021,   OTTMUST00000043628
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X99,839,411 - 99,840,322 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97576 AgrOrtholog
Ensembl Genes ENSMUSG00000034055 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000042778 ENTREZGENE
  ENSMUSP00000042778.6 UniProtKB/TrEMBL
  ENSMUSP00000061991 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000109241 UniProtKB/Swiss-Prot
  ENSMUSP00000112529 ENTREZGENE
  ENSMUSP00000112529.2 UniProtKB/TrEMBL
  ENSMUSP00000113302.2 UniProtKB/TrEMBL
  ENSMUSP00000114066.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000043596 ENTREZGENE
  ENSMUST00000043596.12 UniProtKB/TrEMBL
  ENSMUST00000052012 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000113611 UniProtKB/Swiss-Prot
  ENSMUST00000119229.8 UniProtKB/TrEMBL
  ENSMUST00000120270.8 UniProtKB/TrEMBL
  ENSMUST00000122022 ENTREZGENE
  ENSMUST00000122022.8 UniProtKB/TrEMBL
Gene3D-CATH 1.50.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro 6-hairpin_glycosidase_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6hp_glycosidase-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GH15-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KPBA/B_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PHK_A/B_su UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18679 UniProtKB/Swiss-Prot
MGD MGI:97576 ENTREZGENE
NCBI Gene 18679 ENTREZGENE
PANTHER PHOSPHORYLASE B KINASE REGULATORY SUBUNIT ALPHA, SKELETAL MUSCLE ISOFORM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10749 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glyco_hydro_15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KPBB_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Phka1 PhenoGen
Superfamily-SCOP SSF48208 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AI87 ENTREZGENE, UniProtKB/TrEMBL
  A2AI88_MOUSE UniProtKB/TrEMBL
  A2AI89_MOUSE UniProtKB/TrEMBL
  A2AI90 ENTREZGENE
  A2AI91 ENTREZGENE, UniProtKB/TrEMBL
  KPB1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TQJ0 ENTREZGENE, UniProtKB/TrEMBL
  Q3UV91 ENTREZGENE, UniProtKB/TrEMBL
  Q7TSC5_MOUSE UniProtKB/TrEMBL
  Q8BSV5_MOUSE UniProtKB/TrEMBL
  Q8CBA7 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A2AI90 UniProtKB/Swiss-Prot