Trib1 (tribbles pseudokinase 1) - Rat Genome Database

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Gene: Trib1 (tribbles pseudokinase 1) Mus musculus
Analyze
Symbol: Trib1
Name: tribbles pseudokinase 1
RGD ID: 1332442
MGI Page MGI
Description: Enables RNA polymerase II-specific DNA-binding transcription factor binding activity; ubiquitin protein ligase binding activity; and ubiquitin-protein transferase regulator activity. Involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process; regulation of myeloid leukocyte differentiation; and response to lipopolysaccharide. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and submandibular gland primordium. Orthologous to human TRIB1 (tribbles pseudokinase 1).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: A530090O15Rik; Trb; TRB-1; Trb1; tribbles homolog 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391559,520,503 - 59,528,948 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1559,520,199 - 59,528,948 (+)EnsemblGRCm39 Ensembl
GRCm381559,648,654 - 59,657,099 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1559,648,350 - 59,657,099 (+)EnsemblGRCm38mm10GRCm38
MGSCv371559,480,209 - 59,488,654 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361559,478,335 - 59,486,780 (+)NCBIMGSCv36mm8
Celera1561,178,271 - 61,186,716 (+)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1525.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
1-fluoro-2,4-dinitrobenzene  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2-amino-4,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-azacytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
acrylamide  (EXP,ISO)
afimoxifene  (ISO)
aflatoxin B1  (EXP,ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
antimycin A  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
butan-1-ol  (ISO)
C60 fullerene  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP)
calcitriol  (ISO)
cannabidiol  (ISO)
carbon nanotube  (EXP)
chloropicrin  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
deguelin  (ISO)
dexamethasone  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (EXP,ISO)
diethyl maleate  (ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
fentin chloride  (ISO)
fluoranthene  (EXP)
folic acid  (EXP)
folpet  (EXP)
formaldehyde  (ISO)
glycidol  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
indole-3-methanol  (ISO)
indometacin  (ISO)
inulin  (EXP)
irinotecan  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
melphalan  (ISO)
mercury dichloride  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
methylseleninic acid  (ISO)
mitoxantrone  (ISO)
monosodium L-glutamate  (EXP)
N-acetyl-L-cysteine  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
N-Nitrosopyrrolidine  (ISO)
nickel dichloride  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phenol  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
rac-lactic acid  (ISO)
raloxifene  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP,ISO)
sotorasib  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
torcetrapib  (ISO)
trametinib  (ISO)
triadimefon  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
triptonide  (EXP)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vincristine  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. A common variant association study in ethnic Saudi Arabs reveals novel susceptibility loci for hypertriglyceridemia. Ram R, etal., Clin Genet. 2017 Mar;91(3):371-378. doi: 10.1111/cge.12859. Epub 2017 Jan 30.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. The effect of extended lymphadenectomy on survival in patients with gastric adenocarcinoma. Volpe CM, etal., J Am Coll Surg. 1995 Jul;181(1):56-64.
9. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:15299019   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16602821  
PMID:17576771   PMID:17724128   PMID:18593568   PMID:20410507   PMID:20522600   PMID:21084752   PMID:21267068   PMID:21677750   PMID:21873635   PMID:23417677   PMID:23515163   PMID:23810419  
PMID:23884858   PMID:24194600   PMID:24389359   PMID:24732777   PMID:24834131   PMID:26147683   PMID:26348894   PMID:26547624   PMID:27140396   PMID:28002407   PMID:28761077   PMID:29881822  
PMID:29899113   PMID:30031847   PMID:30917956   PMID:31666640   PMID:31692955   PMID:32150623   PMID:32265926   PMID:32730594   PMID:33329538   PMID:34381180   PMID:34779419   PMID:34811364  
PMID:34890852   PMID:35664073   PMID:36694470   PMID:37078290   PMID:37355685   PMID:37527035  


Genomics

Comparative Map Data
Trib1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391559,520,503 - 59,528,948 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1559,520,199 - 59,528,948 (+)EnsemblGRCm39 Ensembl
GRCm381559,648,654 - 59,657,099 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1559,648,350 - 59,657,099 (+)EnsemblGRCm38mm10GRCm38
MGSCv371559,480,209 - 59,488,654 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361559,478,335 - 59,486,780 (+)NCBIMGSCv36mm8
Celera1561,178,271 - 61,186,716 (+)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1525.41NCBI
TRIB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388125,430,358 - 125,438,403 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8125,430,358 - 125,438,403 (+)EnsemblGRCh38hg38GRCh38
GRCh378126,442,600 - 126,450,645 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368126,511,745 - 126,519,827 (+)NCBINCBI36Build 36hg18NCBI36
Build 348126,511,744 - 126,519,824NCBI
Celera8122,631,533 - 122,639,615 (+)NCBICelera
Cytogenetic Map8q24.13NCBI
HuRef8121,766,406 - 121,774,484 (+)NCBIHuRef
CHM1_18126,482,807 - 126,490,884 (+)NCBICHM1_1
T2T-CHM13v2.08126,563,804 - 126,571,849 (+)NCBIT2T-CHM13v2.0
Trib1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8793,096,001 - 93,102,547 (+)NCBIGRCr8
mRatBN7.2791,206,579 - 91,213,126 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl791,206,579 - 91,214,731 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx793,092,395 - 93,098,946 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0795,293,606 - 95,300,157 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0795,125,539 - 95,132,086 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0799,954,492 - 99,961,026 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl799,954,492 - 99,961,026 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07100,534,391 - 100,540,925 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4796,442,239 - 96,448,785 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1796,477,093 - 96,482,772 (+)NCBI
Celera787,967,385 - 87,973,931 (+)NCBICelera
Cytogenetic Map7q33NCBI
Trib1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955461494,003 - 501,990 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955461494,003 - 501,928 (+)NCBIChiLan1.0ChiLan1.0
TRIB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27142,852,443 - 142,860,884 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18118,364,202 - 118,371,720 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08122,115,194 - 122,123,319 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18124,867,334 - 124,874,863 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8124,867,359 - 124,872,924 (+)Ensemblpanpan1.1panPan2
TRIB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11323,337,788 - 23,346,304 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1323,337,788 - 23,346,304 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1323,310,655 - 23,319,064 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01323,683,492 - 23,691,935 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1323,682,916 - 23,691,935 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11323,404,842 - 23,413,262 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01323,511,711 - 23,520,081 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01323,755,679 - 23,764,091 (+)NCBIUU_Cfam_GSD_1.0
Trib1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530314,975,282 - 14,983,509 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647022,401,379 - 22,409,490 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647022,401,713 - 22,408,808 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRIB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl414,289,751 - 14,297,663 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1414,289,739 - 14,298,119 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
TRIB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18120,013,757 - 120,021,823 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8120,014,339 - 120,019,887 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603920,151,213 - 20,159,305 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Trib1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473529,879,310 - 29,888,305 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473529,880,732 - 29,888,117 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Trib1
246 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1383
Count of miRNA genes:694
Interacting mature miRNAs:891
Transcripts:ENSMUST00000067543, ENSMUST00000118228
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357407Pfat4_mpredicted fat percentage 4 (mouse)8.6Body fat amountpredicted fat percentage155711700591117153Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
1301345Bgeq14_mbody growth early QTL 14 (mouse)Not determined152631178060311880Mouse
1300578Cd8ts3_mCD8 T cell subset 3 (mouse)Not determined153400469468004804Mouse
1301568Tria2_mT-cell receptor induced activation 2 (mouse)Not determined154485914178859281Mouse
26884417Bzwq4_mbi-zygomatic width QTL 4, 5 week (mouse)15612948172471849Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15692948175871849Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800024486684201Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154216339695497881Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
10755515Amzn3_manatomical modifier of Zfp423 3 (mouse)154638964680389845Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
1301406Egrd2_mearly growth rate (mouse)Not determined152631178060311880Mouse
1301860Gct3_mgranulosa cell tumorigenesis 3 (mouse)Not determined154740959681409691Mouse
1301708Cocrb14_mcocaine related behavior 14 (mouse)Not determined155180651585806651Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
27095936Ulnl4_mulna length 4, 5 week (mouse)155676339687684201Mouse
1357514Mbis3_mMycobacterium bovis-induced systemic lupus erythematosus 3 (mouse)Not determined162631178060311880Mouse
27226800Scvln20_msacral vertebrae length 2, 16 week (mouse)152660008666371849Mouse
10401902Sicd2_mseizure-induced cell death 2 (mouse)Not determined15347438971197538Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
1357703Vtbt17_mvertebral trabecular bone trait 17 (mouse)Not determined154455331378553437Mouse
10045637Heal27_mwound healing/regeneration 29 (mouse)Not determined155141836185418511Mouse
38501067Tip3_mtuberculosis immunophenotype 3, IFN-g level (mouse)155356339689584203Mouse
26884387Skwq8_mskull length QTL 8, 10 week (mouse)15612948168271849Mouse
1301450Bpq6_mblood pressure QTL 6 (mouse)Not determined152828264662282739Mouse
1357512Bsbob5_mBSB obesity 5 (mouse)Not determined152828264662282739Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
26884420Cvht6_mcranial vault height 6, 10 week (mouse)154556339669171849Mouse
1357756Alaa4_malopecia areata 4 (mouse)Not determined154638964680389845Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
26884392Humsd8_mhumerus midshaft diameter 8, 16 week (mouse)152930014676084200Mouse
1301580Hrq2_mheart rate quantitative locus 2 (mouse)Not determined153910039573100593Mouse
26884399Humsd1_mhumerus midshaft diameter 1, 5 week (mouse)1548363396101708435Mouse
1301779Dpml_mdopamine loss (mouse)Not determined155100469476794493Mouse
10412067Pain2_mpain 2 (mouse)Not determined155164533985645626Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
4142459Lfnq3_mlung function QTL 3 (mouse)Not determined4017702272372580Mouse
1301429Pcir3_mperiosteal circumference 3 (mouse)Not determined154846536282465496Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15612948175871849Mouse
4142198Hbtq_mhabituation QTL (mouse)Not determined155116070885160833Mouse
13504731Cath5_mcarotid atherosclerosis 5 (mouse)155478912988789129Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
1301324Cdif_mcolor difference (mouse)Not determined153597590669976019Mouse
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
26884412Bzwq10_mbi-zygomatic width QTL 10, 10 week (mouse)15612948171471849Mouse
1300772Bglq16_mbody growth late QTL 16 (mouse)Not determined152631178060311880Mouse
26884397Humsd5_mhumerus midshaft diameter 5, 10 week (mouse)154836339698397881Mouse
1302074Bmd4_mbone mineral density 4 (mouse)Not determined1556186708103425899Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15692948175871849Mouse
1301006Hfib1_mhepatic fibrogenesis 1 (mouse)Not determined154730633481306479Mouse
1357661Eae2b_msusceptibility to experimental allergic encephalomyelitis 2b (mouse)Not determined155100469464944308Mouse
1302080Szs13_mseizure susceptibility 13 (mouse)Not determined155168583285694449Mouse
1300800Ses3_msalmonella enteritidis susceptibility 3 (mouse)Not determined155711700591117153Mouse

Markers in Region
RH143669  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381559,648,616 - 59,648,818UniSTSGRCm38
MGSCv371559,480,171 - 59,480,373UniSTSGRCm37
Celera1561,178,233 - 61,178,435UniSTS
Cytogenetic Map15D1UniSTS
Trib1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381559,655,721 - 59,655,981UniSTSGRCm38
MGSCv371559,487,276 - 59,487,536UniSTSGRCm37
Celera1561,185,338 - 61,185,598UniSTS
Cytogenetic Map15D1UniSTS
cM Map15 UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000067543   ⟹   ENSMUSP00000068834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1559,520,199 - 59,528,948 (+)Ensembl
GRCm38.p6 Ensembl1559,648,350 - 59,657,099 (+)Ensembl
RefSeq Acc Id: ENSMUST00000118228   ⟹   ENSMUSP00000112828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1559,520,502 - 59,525,538 (+)Ensembl
GRCm38.p6 Ensembl1559,648,653 - 59,653,689 (+)Ensembl
RefSeq Acc Id: NM_144549   ⟹   NP_653132
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391559,520,503 - 59,528,948 (+)NCBI
GRCm381559,648,654 - 59,657,099 (+)ENTREZGENE
MGSCv371559,480,209 - 59,488,654 (+)RGD
Celera1561,178,271 - 61,186,716 (+)RGD
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_653132   ⟸   NM_144549
- UniProtKB: Q8BZX3 (UniProtKB/Swiss-Prot),   Q8BJR9 (UniProtKB/Swiss-Prot),   Q8BFS7 (UniProtKB/Swiss-Prot),   Q91W04 (UniProtKB/Swiss-Prot),   Q8K4K4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000112828   ⟸   ENSMUST00000118228
RefSeq Acc Id: ENSMUSP00000068834   ⟸   ENSMUST00000067543
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8K4K4-F1-model_v2 AlphaFold Q8K4K4 1-372 view protein structure

Promoters
RGD ID:6826559
Promoter ID:MM_KWN:18560
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000067543,   ENSMUST00000118228
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361559,479,096 - 59,480,982 (+)MPROMDB
RGD ID:6847278
Promoter ID:MM_ACW:18189
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Kidney,   Liver
Transcripts:TRIB1.CSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361559,484,226 - 59,484,726 (+)MPROMDB
RGD ID:8683818
Promoter ID:EPDNEW_M19940
Type:initiation region
Name:Trib1_1
Description:Mus musculus tribbles pseudokinase 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381559,648,654 - 59,648,714EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2443397 AgrOrtholog
Ensembl Genes ENSMUSG00000032501 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000067543 ENTREZGENE
  ENSMUST00000067543.8 UniProtKB/Swiss-Prot
  ENSMUST00000118228.2 UniProtKB/Swiss-Prot
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro Kinase-like_dom_sf UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  TRB1 UniProtKB/Swiss-Prot
  Tribbles/Ser_Thr_kinase_40 UniProtKB/Swiss-Prot
KEGG Report mmu:211770 UniProtKB/Swiss-Prot
MGD MGI:2443397 ENTREZGENE
NCBI Gene 211770 ENTREZGENE
PANTHER PTHR22961 UniProtKB/Swiss-Prot
  PTHR22961:SF17 UniProtKB/Swiss-Prot
Pfam Pkinase UniProtKB/Swiss-Prot
PhenoGen Trib1 PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
SMART S_TKc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot
UniProt Q8BFS7 ENTREZGENE
  Q8BJR9 ENTREZGENE
  Q8BZX3 ENTREZGENE
  Q8K4K4 ENTREZGENE
  Q91W04 ENTREZGENE
  TRIB1_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8BFS7 UniProtKB/Swiss-Prot
  Q8BJR9 UniProtKB/Swiss-Prot
  Q8BZX3 UniProtKB/Swiss-Prot
  Q91W04 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-14 Trib1  tribbles pseudokinase 1    tribbles homolog 1 (Drosophila)  Symbol and/or name change 5135510 APPROVED