Derl2 (Der1-like domain family, member 2) - Rat Genome Database
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Gene: Derl2 (Der1-like domain family, member 2) Mus musculus
Analyze
Symbol: Derl2
Name: Der1-like domain family, member 2
RGD ID: 1614978
MGI Page MGI
Description: Is expressed in yolk sac and yolk sac endoderm. Orthologous to human DERL2 (derlin 2); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: BC005682; carcinoma related; CGI-10; CGI-101; degradation in endoplasmic reticulum protein 2; der1-like protein 2; Derl; derlin 2; derlin-2; F; F-; F-lana; Flana; MGC11613; RP23-83I13.8
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,898,266 - 70,910,667 (-)NCBIGRCm39mm39
GRCm39 Ensembl1170,897,990 - 70,910,667 (-)Ensembl
GRCm381171,007,440 - 71,019,841 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1171,007,164 - 71,019,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,820,947 - 70,832,765 (-)NCBIGRCm37mm9NCBIm37
MGSCv361170,823,640 - 70,835,458 (-)NCBImm8
Celera1178,561,860 - 78,573,678 (-)NCBICelera
Cytogenetic Map11B4NCBI
cM Map1143.21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11318612   PMID:11500051   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273  
PMID:15215855   PMID:15306695   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16186509   PMID:16449189   PMID:18799693   PMID:19509052   PMID:21220515   PMID:21267068  
PMID:21873635   PMID:23444373   PMID:24457600   PMID:25009997   PMID:25078082   PMID:27626380   PMID:29167172   PMID:30995221   PMID:32968282  


Genomics

Comparative Map Data
Derl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,898,266 - 70,910,667 (-)NCBIGRCm39mm39
GRCm39 Ensembl1170,897,990 - 70,910,667 (-)Ensembl
GRCm381171,007,440 - 71,019,841 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1171,007,164 - 71,019,841 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,820,947 - 70,832,765 (-)NCBIGRCm37mm9NCBIm37
MGSCv361170,823,640 - 70,835,458 (-)NCBImm8
Celera1178,561,860 - 78,573,678 (-)NCBICelera
Cytogenetic Map11B4NCBI
cM Map1143.21NCBI
DERL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl175,471,254 - 5,486,811 (-)EnsemblGRCh38hg38GRCh38
GRCh38175,471,254 - 5,486,225 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37175,374,574 - 5,389,498 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36175,318,337 - 5,330,221 (-)NCBINCBI36hg18NCBI36
Build 34175,318,336 - 5,330,218NCBI
Celera175,393,985 - 5,405,873 (-)NCBI
Cytogenetic Map17p13.2NCBI
HuRef175,268,081 - 5,279,745 (-)NCBIHuRef
CHM1_1175,384,251 - 5,399,218 (-)NCBICHM1_1
Derl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21055,727,764 - 55,739,462 (-)NCBI
Rnor_6.0 Ensembl1057,644,207 - 57,653,359 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01057,641,682 - 57,653,554 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01057,386,894 - 57,398,868 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1054,873,447 - 54,885,319 (-)NCBICelera
Cytogenetic Map10q24NCBI
Derl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546710,825,341 - 10,837,328 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546710,824,922 - 10,837,408 (-)NCBIChiLan1.0ChiLan1.0
DERL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1175,514,440 - 5,526,363 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl175,514,440 - 5,526,363 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0175,519,183 - 5,534,145 (-)NCBIMhudiblu_PPA_v0panPan3
DERL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl531,319,717 - 31,330,841 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1531,319,660 - 31,330,846 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Derl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366772,328,783 - 2,342,068 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DERL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1251,507,996 - 51,524,793 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11251,508,138 - 51,524,799 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
DERL2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1164,882,296 - 4,897,799 (-)NCBI
ChlSab1.1 Ensembl164,881,876 - 4,898,078 (-)Ensembl
Derl2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247869,274,302 - 9,285,645 (-)NCBI

Position Markers
UniSTS:236628  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,010,048 - 71,010,142UniSTSGRCm38
MGSCv371170,823,550 - 70,823,644UniSTSGRCm37
Celera1178,564,463 - 78,564,557UniSTS
Cytogenetic Map11B4UniSTS
cM Map1142.0UniSTS
D11Die14  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,017,389 - 71,017,502UniSTSGRCm38
MGSCv371170,830,891 - 70,831,004UniSTSGRCm37
Celera1178,571,804 - 78,571,917UniSTS
Cytogenetic Map11B4UniSTS
cM Map11 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116910000072600000Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116910000072600000Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116910000072600000Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116910000072600000Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116910000072600000Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116910000072600000Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116910000072600000Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116910000072600000Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116910000072600000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1379
Count of miRNA genes:660
Interacting mature miRNAs:821
Transcripts:ENSMUST00000018586, ENSMUST00000108523, ENSMUST00000131340, ENSMUST00000132198, ENSMUST00000140712, ENSMUST00000143850, ENSMUST00000171041
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001291146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_033562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF208064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE627680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB526064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR936847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000018586   ⟹   ENSMUSP00000136261
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,010,351 - 71,019,269 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108523   ⟹   ENSMUSP00000104163
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,007,164 - 71,019,242 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131340   ⟹   ENSMUSP00000135984
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,014,566 - 71,019,212 (-)Ensembl
RefSeq Acc Id: ENSMUST00000132198   ⟹   ENSMUSP00000136401
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,013,122 - 71,019,275 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140712
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,012,122 - 71,019,243 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143850   ⟹   ENSMUSP00000117052
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,007,442 - 71,019,303 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171041   ⟹   ENSMUSP00000127568
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,009,933 - 71,019,841 (-)Ensembl
RefSeq Acc Id: NM_001291146   ⟹   NP_001278075
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,898,266 - 70,910,667 (-)NCBI
GRCm381171,007,440 - 71,019,841 (-)NCBI
Celera1178,561,855 - 78,574,256 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291147   ⟹   NP_001278076
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,898,266 - 70,910,129 (-)NCBI
GRCm381171,007,440 - 71,019,303 (-)NCBI
Celera1178,561,855 - 78,574,256 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291148   ⟹   NP_001278077
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,898,266 - 70,910,129 (-)NCBI
GRCm381171,007,440 - 71,019,303 (-)NCBI
Celera1178,561,855 - 78,574,256 (-)NCBI
Sequence:
RefSeq Acc Id: NM_033562   ⟹   NP_291040
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,898,266 - 70,910,129 (-)NCBI
GRCm381171,007,440 - 71,019,303 (-)NCBI
MGSCv371170,820,947 - 70,832,765 (-)RGD
Celera1178,561,855 - 78,574,256 (-)NCBI
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017314227   ⟹   XP_017169716
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,903,961 - 70,910,197 (-)NCBI
GRCm381171,013,135 - 71,019,378 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_291040   ⟸   NM_033562
- Peptide Label: isoform a
- UniProtKB: Q8BNI4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001278075   ⟸   NM_001291146
- Peptide Label: isoform b
- UniProtKB: Q8BNI4 (UniProtKB/Swiss-Prot),   Q3U957 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001278077   ⟸   NM_001291148
- Peptide Label: isoform c
- UniProtKB: Q8BNI4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001278076   ⟸   NM_001291147
- Peptide Label: isoform b
- UniProtKB: Q8BNI4 (UniProtKB/Swiss-Prot),   Q3U957 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169716   ⟸   XM_017314227
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000117052   ⟸   ENSMUST00000143850
RefSeq Acc Id: ENSMUSP00000104163   ⟸   ENSMUST00000108523
RefSeq Acc Id: ENSMUSP00000136401   ⟸   ENSMUST00000132198
RefSeq Acc Id: ENSMUSP00000127568   ⟸   ENSMUST00000171041
RefSeq Acc Id: ENSMUSP00000135984   ⟸   ENSMUST00000131340
RefSeq Acc Id: ENSMUSP00000136261   ⟸   ENSMUST00000018586

Promoters
RGD ID:6820715
Promoter ID:MM_KWN:8272
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000013718,   OTTMUST00000013720,   OTTMUST00000013721,   OTTMUST00000013722,   OTTMUST00000013723,   OTTMUST00000013724,   OTTMUST00000013725,   OTTMUST00000013727,   OTTMUST00000013728,   OTTMUST00000013729,   UC007JXI.1,   UC007JXK.1,   UC007JXL.1,   UC007JXN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,832,626 - 70,833,462 (-)MPROMDB
RGD ID:8675388
Promoter ID:EPDNEW_M15725
Type:multiple initiation site
Name:Derl2_1
Description:Mus musculus Der1-like domain family, member 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15727  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381171,019,252 - 71,019,312EPDNEW
RGD ID:8675392
Promoter ID:EPDNEW_M15727
Type:single initiation site
Name:Derl2_2
Description:Mus musculus Der1-like domain family, member 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15725  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381171,019,789 - 71,019,849EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2151483 AgrOrtholog
Ensembl Genes ENSMUSG00000018442 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000104163 UniProtKB/Swiss-Prot
  ENSMUSP00000117052 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000127568 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000135984 UniProtKB/TrEMBL
  ENSMUSP00000136261 UniProtKB/TrEMBL
  ENSMUSP00000136401 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000018586 UniProtKB/TrEMBL
  ENSMUST00000108523 UniProtKB/Swiss-Prot
  ENSMUST00000131340 UniProtKB/TrEMBL
  ENSMUST00000132198 UniProtKB/TrEMBL
  ENSMUST00000143850 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000171041 ENTREZGENE, UniProtKB/TrEMBL
InterPro DER1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:116891 UniProtKB/Swiss-Prot
MGD MGI:2151483 ENTREZGENE
NCBI Gene 116891 ENTREZGENE
Pfam DER1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Derl2 PhenoGen
UniProt DERL2_MOUSE UniProtKB/Swiss-Prot
  J3KMR6_MOUSE UniProtKB/TrEMBL
  J3QMF4_MOUSE UniProtKB/TrEMBL
  J3QMQ7_MOUSE UniProtKB/TrEMBL
  Q3U957 ENTREZGENE, UniProtKB/TrEMBL
  Q8BNI4 ENTREZGENE
UniProt Secondary Q920I5 UniProtKB/Swiss-Prot
  Q99J12 UniProtKB/Swiss-Prot