Pmaip1 (phorbol-12-myristate-13-acetate-induced protein 1) - Rat Genome Database
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Gene: Pmaip1 (phorbol-12-myristate-13-acetate-induced protein 1) Mus musculus
Analyze
Symbol: Pmaip1
Name: phorbol-12-myristate-13-acetate-induced protein 1
RGD ID: 1621551
MGI Page MGI
Description: Involved in several processes, including apoptotic signaling pathway; negative regulation of mitochondrial membrane potential; and positive regulation of apoptotic process. Localizes to mitochondrion. Is expressed in several structures, including brain; immune system; limb; liver; and reproductive system. Orthologous to human PMAIP1 (phorbol-12-myristate-13-acetate-induced protein 1); PARTICIPATES IN intrinsic apoptotic pathway; p53 signaling pathway; INTERACTS WITH 1,1-dichloroethene; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: N; Noxa
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391866,591,675 - 66,598,629 (+)NCBIGRCm39mm39
GRCm381866,458,604 - 66,465,558 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1866,458,533 - 66,465,565 (+)EnsemblGRCm38mm10GRCm38
MGSCv371866,618,258 - 66,625,212 (+)NCBIGRCm37mm9NCBIm37
MGSCv361866,583,973 - 66,590,927 (+)NCBImm8
Celera1867,745,077 - 67,752,031 (+)NCBICelera
Cytogenetic Map18E1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-anisomycin  (ISO)
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1,3-benzothiazole-2-thiol  (ISO)
1,4-phenylenediamine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
1-fluoro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2-bis(hydroxymethyl)-1-azabicyclo[2.2.2]octan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-acetamidofluorene  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3'-diindolylmethane  (ISO)
3-phenylprop-2-enal  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
4-hydroperoxycyclophosphamide  (EXP)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-bromoindirubin-3'-oxime  (ISO)
6-O-methylguanine  (ISO)
9,10-phenanthroquinone  (ISO)
acetamide  (ISO)
acetylsalicylic acid  (ISO)
acrolein  (ISO)
adefovir pivoxil  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-pinene  (ISO)
amphetamine  (ISO)
antirheumatic drug  (ISO)
arachidonic acid  (ISO)
aristolochic acid  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
Aurin  (ISO)
baicalein  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
Benzo[k]fluoranthene  (EXP)
benzyl bromide  (ISO)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bortezomib  (ISO)
butanal  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
carboplatin  (ISO)
celecoxib  (ISO)
chloroacetaldehyde  (ISO)
chloromethylisothiazolinone  (ISO)
chloroprene  (EXP)
choline  (EXP)
chromium(6+)  (ISO)
chrysene  (EXP)
cidofovir anhydrous  (ISO)
cisplatin  (EXP,ISO)
clodronic acid  (ISO)
cobalt atom  (ISO)
cobalt dichloride  (ISO)
cobalt(2+) sulfate  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (EXP,ISO)
CU-O LINKAGE  (ISO)
curcumin  (ISO)
cycloheximide  (ISO)
cyclosporin A  (EXP,ISO)
D-penicillamine  (ISO)
deoxynivalenol  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
dichloromethane  (ISO)
diclofenac  (EXP)
dihydroartemisinin  (ISO)
dimethyl sulfate  (ISO)
dioxygen  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
elesclomol  (ISO)
entinostat  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
ethylbenzene  (ISO)
etoposide  (ISO)
eugenol  (ISO)
fenvalerate  (ISO)
flubendazole  (ISO)
flusilazole  (EXP)
flutamide  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glutaraldehyde  (ISO)
glyphosate  (ISO)
gold atom  (EXP)
gold(0)  (EXP)
hexaconazole  (EXP)
hydrogen peroxide  (ISO)
hydroxyurea  (EXP)
indometacin  (ISO)
ionomycin  (ISO)
iopamidol  (ISO)
irinotecan  (ISO)
isoprenaline  (ISO)
L-ascorbic acid  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
lithium chloride  (ISO)
LY294002  (ISO)
maneb  (ISO)
manganese(II) chloride  (ISO)
menadione  (ISO)
mercury dibromide  (ISO)
mercury dichloride  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
motexafin gadolinium  (ISO)
N(6)-dimethylallyladenine  (ISO)
N-acetyl-L-cysteine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP,ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N-nitrosourea  (EXP)
N-Nitrosopyrrolidine  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nickel sulfate  (ISO)
nitric oxide  (ISO)
Nutlin-3  (ISO)
o-xylene  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
patulin  (ISO)
pentanal  (ISO)
perfluorononanoic acid  (ISO)
pevonedistat  (EXP,ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
potassium dichromate  (ISO)
progesterone  (EXP,ISO)
promethazine  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
ruthenium atom  (ISO)
sanguinarine  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
simvastatin  (ISO)
sirolimus  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sorafenib  (ISO)
sulindac sulfide  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP)
tetraphene  (EXP)
thapsigargin  (EXP,ISO)
thiostrepton  (ISO)
Tiron  (ISO)
titanium dioxide  (EXP)
toluene  (ISO)
torcetrapib  (ISO)
triacsin C  (ISO)
triadimefon  (EXP)
Tributyltin oxide  (ISO)
trichloroethene  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
versicolorin A  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)
zinc acetate  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activation of cysteine-type endopeptidase activity involved in apoptotic process  (IDA)
apoptotic process  (ISO)
cellular response to DNA damage stimulus  (IMP)
cellular response to glucose starvation  (ISO)
cellular response to hypoxia  (ISO)
defense response to virus  (ISO)
intrinsic apoptotic signaling pathway  (ISO)
intrinsic apoptotic signaling pathway by p53 class mediator  (IMP,ISO)
intrinsic apoptotic signaling pathway in response to DNA damage  (IMP)
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator  (IDA)
intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress  (IMP)
negative regulation of fibroblast proliferation  (IMP)
negative regulation of mitochondrial membrane potential  (IDA)
positive regulation of apoptotic process  (IMP,ISO)
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process  (ISO)
positive regulation of DNA damage response, signal transduction by p53 class mediator  (IMP,ISO)
positive regulation of extrinsic apoptotic signaling pathway via death domain receptors  (ISO)
positive regulation of glucose metabolic process  (ISO)
positive regulation of intrinsic apoptotic signaling pathway  (ISO)
positive regulation of neuron apoptotic process  (IMP)
positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway  (IMP)
positive regulation of release of cytochrome c from mitochondria  (ISO)
proteasomal protein catabolic process  (ISO)
reactive oxygen species metabolic process  (ISO)
regulation of apoptotic process  (RCA)
regulation of mitochondrial membrane permeability  (ISO)
release of cytochrome c from mitochondria  (IDA,IMP)
response to dsRNA  (ISO)
response to UV  (IMP)
response to X-ray  (IMP)
T cell homeostasis  (IMP)

Cellular Component
cytosol  (ISO)
mitochondrion  (HDA,IBA,IDA,ISO)
nucleus  (ISO)

Molecular Function
protein binding  (IPI,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:10349636   PMID:10807576   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12819136   PMID:12952892   PMID:14500851   PMID:14651853   PMID:14699081  
PMID:15081359   PMID:15694340   PMID:15703398   PMID:15721256   PMID:15750633   PMID:16059910   PMID:16118324   PMID:16141072   PMID:16141073   PMID:16407291   PMID:16697956   PMID:16822983  
PMID:16832056   PMID:16928686   PMID:17024184   PMID:17167080   PMID:17283183   PMID:17307841   PMID:17389404   PMID:17476283   PMID:17518541   PMID:17576813   PMID:17618288   PMID:17634411  
PMID:17893884   PMID:18032672   PMID:18192275   PMID:18246078   PMID:18259198   PMID:18287039   PMID:18287559   PMID:18411339   PMID:18589438   PMID:18974090   PMID:19144853   PMID:19148184  
PMID:19152337   PMID:19237507   PMID:19285955   PMID:19334288   PMID:19959756   PMID:20195489   PMID:20498273   PMID:20620942   PMID:20627101   PMID:20664053   PMID:20798045   PMID:20829369  
PMID:21040902   PMID:21148109   PMID:21163929   PMID:21267068   PMID:21491542   PMID:21660046   PMID:21677750   PMID:21689638   PMID:21690328   PMID:21727192   PMID:21742363   PMID:21873635  
PMID:21945433   PMID:22144184   PMID:22185759   PMID:22343714   PMID:22380599   PMID:22402282   PMID:22538851   PMID:22573037   PMID:22960223   PMID:23000175   PMID:23068609   PMID:23277490  
PMID:23589895   PMID:23593480   PMID:23665218   PMID:23678004   PMID:23733106   PMID:23770082   PMID:23922240   PMID:23975731   PMID:24013501   PMID:24608793   PMID:25081090   PMID:25124553  
PMID:25299781   PMID:25698446   PMID:25733019   PMID:26045049   PMID:26181197   PMID:26334721   PMID:26344567   PMID:26437021   PMID:26497683   PMID:26742432   PMID:26866517   PMID:27064265  
PMID:27479816   PMID:27510977   PMID:27862899   PMID:28049824   PMID:28079889   PMID:28594399   PMID:28777373   PMID:29931031   PMID:30154103   PMID:30333037   PMID:30348983   PMID:30858352  
PMID:31178404   PMID:31580946   PMID:31749402   PMID:32451402  


Genomics

Comparative Map Data
Pmaip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391866,591,675 - 66,598,629 (+)NCBIGRCm39mm39
GRCm381866,458,604 - 66,465,558 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1866,458,533 - 66,465,565 (+)EnsemblGRCm38mm10GRCm38
MGSCv371866,618,258 - 66,625,212 (+)NCBIGRCm37mm9NCBIm37
MGSCv361866,583,973 - 66,590,927 (+)NCBImm8
Celera1867,745,077 - 67,752,031 (+)NCBICelera
Cytogenetic Map18E1NCBI
PMAIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1859,899,996 - 59,904,305 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1859,899,948 - 59,904,306 (+)EnsemblGRCh38hg38GRCh38
GRCh381859,899,996 - 59,904,305 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371857,567,153 - 57,571,538 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh371857,567,228 - 57,571,537 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361855,718,172 - 55,722,518 (+)NCBINCBI36hg18NCBI36
Build 341855,718,216 - 55,722,517NCBI
Celera1854,285,254 - 54,289,600 (+)NCBI
Cytogenetic Map18q21.32NCBI
HuRef1854,276,682 - 54,281,028 (+)NCBIHuRef
CHM1_11857,562,830 - 57,567,176 (+)NCBICHM1_1
Pmaip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21859,986,187 - 59,990,174 (+)NCBI
Rnor_6.0 Ensembl1862,174,670 - 62,181,102 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01862,159,128 - 62,179,635 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01861,365,056 - 61,369,043 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41862,914,845 - 62,918,832 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11862,988,045 - 62,992,033 (+)NCBI
Celera1858,105,912 - 58,109,899 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
Pmaip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540244,005,517 - 44,010,722 (+)NCBIChiLan1.0ChiLan1.0
PMAIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11856,611,098 - 56,615,449 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1856,611,098 - 56,615,449 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01853,286,590 - 53,290,913 (+)NCBIMhudiblu_PPA_v0panPan3
PMAIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl116,469,793 - 16,472,910 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1116,469,793 - 16,472,910 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Pmaip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364974,985,995 - 4,986,720 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PMAIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1161,182,868 - 161,188,164 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11161,184,458 - 161,188,138 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21178,853,630 - 178,857,420 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PMAIP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11819,861,182 - 19,865,628 (-)NCBI
ChlSab1.1 Ensembl1819,862,743 - 19,865,250 (-)Ensembl
Pmaip1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247925,330,289 - 5,338,067 (+)NCBI

Position Markers
Pmaip1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381866,464,176 - 66,465,060UniSTSGRCm38
MGSCv371866,623,830 - 66,624,714UniSTSGRCm37
Celera1867,750,649 - 67,751,533UniSTS
Cytogenetic Map18E1UniSTS
cM Map18 UniSTS
UniSTS:237827  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381866,465,086 - 66,465,325UniSTSGRCm38
MGSCv371866,624,740 - 66,624,979UniSTSGRCm37
Celera1867,751,559 - 67,751,798UniSTS
Cytogenetic Map18E1UniSTS
Pmaip1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381866,464,659 - 66,465,459UniSTSGRCm38
Celera1867,751,132 - 67,751,932UniSTS
Cytogenetic Map18E1UniSTS
Pmaip1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381866,464,401 - 66,464,745UniSTSGRCm38
MGSCv371866,624,055 - 66,624,399UniSTSGRCm37
Celera1867,750,874 - 67,751,218UniSTS
Cytogenetic Map18E1UniSTS
cM Map18 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357603Mom3_mmodifier of Min 3 (mouse)Not determined181389696666965891Mouse
25823173Hrsq12_mhost response to SARS QTL 12, hemorrhage (mouse)182476282478296340Mouse
1357690Vtbt19_mvertebral trabecular bone trait 19 (mouse)Not determined183295797666958154Mouse
1301771Pcyts6_mplasmacytoma susceptibility 6 (mouse)Not determined183552556069525779Mouse
4142366Chlq10_mcirculating hormone level QTL 10 (mouse)Not determined183615795070158108Mouse
15039381Ltgq8_mliver triglyceride QTL 8 (mouse)183807349772073497Mouse
15039383Mvlq5_mmicrovesicular liver lesion QTL 5 (mouse)183807349772073497Mouse
15039384Liviq1_mliver inflammation QTL 1 (mouse)183807349772073497Mouse
15039386Mvlq4_mmacrovesicular liver lesion QTL 4 (mouse)183807349772073497Mouse
12050070Nabq2_mnasal bone morphology QTL 2 (mouse)183897060572970721Mouse
1357639Obsty4_mobesity 4 (mouse)Not determined183948686184620653Mouse
1301902Hrtfm4_mheart failure modifier 4 (mouse)Not determined184317804877178271Mouse
1301215Thcr_mT helper cell response (mouse)Not determined184499753768645706Mouse
12904745Carcdq2_mcardiac collagen deposition QTL 2 (mouse)184629021680290216Mouse
11039493Ltpr8d_mLeishmania tropica response 8d (mouse)184674183280741971Mouse
11039494Ltpr8b_mLeishmania tropica response 8b (mouse)184674183280741971Mouse
1357630Tgq1_mtriglyceride QTL 1 (mouse)Not determined185091908584919240Mouse
11252137Modvl5_mmodifier of vacuolated lens 5 (mouse)185091908584919240Mouse
1302099Hdlq30_mHDL QTL 30 (mouse)Not determined185153522985535397Mouse
10412244Par5_mpulmonary adenoma resistance 5 (mouse)Not determined185153522985535397Mouse
1301853Heal9_mwound healing/regeneration 9 (mouse)Not determined185267220586672345Mouse
1302050Radpf4_mradiation pulmonary fibrosis 4 (mouse)Not determined185283308468645706Mouse
4142443Pgis1_mproteoglycan induced spondylitis 1 (mouse)Not determined185315795076826598Mouse
1301500Szs4_mseizure susceptibility 4 (mouse)Not determined185484280185496018Mouse
12880410V125Dq13_mvitamin D active form serum level QTL 13 (mouse)185630000090300000Mouse
12880430Fgf23lq4_mFGF23 serum level QTL 4 (mouse)185630000090300000Mouse
10412183Sstapa2_mSuseptibility to Staphylococus aureus infection 2 (mouse)Not determined185666155866819414Mouse
12880428V125Dq14_mvitamin D active form serum level QTL 14 (mouse)185730000090702639Mouse
1301353Lbw6_mlupus NZB x NZW 6 (mouse)Not determined185742926790702639Mouse
4141132Eae18_mexperimental allergic encephalomyelitis susceptibility 18 (mouse)Not determined5745748782586603Mouse
4140971Mbmq1_mmale body mass QTL 1 (mouse)Not determined5785721090702639Mouse
12910791Pwgrq8_mpre-weaning growth rate QTL 8 (mouse)185788832769216071Mouse
11039492Ltpr8a_mLeishmania tropica response 8a (mouse)185904702190702639Mouse
11039495Ltpr8c_mLeishmania tropica response 8c (mouse)185904702190702639Mouse
11049564Lmr29_mleishmaniasis resistance 29 (mouse)185904702190702639Mouse
1301103Pgia11_mproteoglycan induced arthritis 11 (mouse)Not determined185982648990702639Mouse
1302109Sluc28_msusceptibility to lung cancer 28 (mouse)Not determined185984762690702639Mouse
38455998Cdtm1_mCD62L+ CD8 TM cells 1 (mouse)186000000080000000Mouse
10412265Par7_mpulmonary adenoma resistance 7 (mouse)Not determined186113937667919240Mouse
4142239Idd21.2_minsulin dependent diabetes susceptibility 21.2 (mouse)Not determined186113937674429343Mouse
1558803W3q16_mweight 3 weeks QTL 16 (mouse)Not determined186113937681448616Mouse
1558782Orgwq9_morgan weight QTL 9 (mouse)Not determined186113937682586603Mouse
11039518Ltpr8_mLeishmania tropica response 8 (mouse)186374183276047170Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir155mmu-miR-155-5pMirtarbaseexternal_infoLuciferase reporter assay//Microarray//qRT-PCR//WeFunctional MTI22509021

Predicted Target Of
Summary Value
Count of predictions:626
Count of miRNA genes:413
Interacting mature miRNAs:482
Transcripts:ENSMUST00000025399
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000025399   ⟹   ENSMUSP00000025399
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1866,458,533 - 66,465,560 (+)Ensembl
RefSeq Acc Id: ENSMUST00000236933   ⟹   ENSMUSP00000158157
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1866,458,593 - 66,464,080 (+)Ensembl
RefSeq Acc Id: ENSMUST00000237161   ⟹   ENSMUSP00000158228
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1866,458,575 - 66,465,565 (+)Ensembl
RefSeq Acc Id: NM_021451   ⟹   NP_067426
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391866,591,675 - 66,598,629 (+)NCBI
GRCm381866,458,604 - 66,465,558 (+)ENTREZGENE
MGSCv371866,618,258 - 66,625,212 (+)RGD
Celera1867,745,077 - 67,752,031 (+)RGD
cM Map18 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_067426   ⟸   NM_021451
- UniProtKB: Q9JM54 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000158228   ⟸   ENSMUST00000237161
RefSeq Acc Id: ENSMUSP00000158157   ⟸   ENSMUST00000236933
RefSeq Acc Id: ENSMUSP00000025399   ⟸   ENSMUST00000025399

Promoters
RGD ID:13678052
Promoter ID:EPDNEW_M23175
Type:single initiation site
Name:Pmaip1_1
Description:Mus musculus phorbol-12-myristate-13-acetate-induced protein1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381866,458,595 - 66,458,655EPDNEW
RGD ID:6829465
Promoter ID:MM_KWN:25533
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000025399
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361866,617,251 - 66,618,362 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1930146 AgrOrtholog
Ensembl Genes ENSMUSG00000024521 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000025399 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000158157 UniProtKB/TrEMBL
  ENSMUSP00000158228 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000025399 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000236933 UniProtKB/TrEMBL
  ENSMUST00000237161 UniProtKB/TrEMBL
InterPro Noxa UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:58801 UniProtKB/Swiss-Prot
MGD MGI:1930146 ENTREZGENE
NCBI Gene 58801 ENTREZGENE
PANTHER PTHR14299 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PMAIP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pmaip1 PhenoGen
UniProt A0A494BAM9_MOUSE UniProtKB/TrEMBL
  A0A494BAU0_MOUSE UniProtKB/TrEMBL
  APR_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE