Crebrf (CREB3 regulatory factor) - Rat Genome Database

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Gene: Crebrf (CREB3 regulatory factor) Mus musculus
Analyze
Symbol: Crebrf
Name: CREB3 regulatory factor
RGD ID: 1331877
MGI Page MGI
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Acts upstream of or within maternal behavior; negative regulation of glucocorticoid mediated signaling pathway; and positive regulation of prolactin signaling pathway. Located in nuclear body. Is expressed in blastocyst; early embryo; polar body; and uterus. Orthologous to human CREBRF (CREB3 regulatory factor); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; benzo[b]fluoranthene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A930001N09Rik; LRF; luman recruitment factor; luman-recruiting factor; RP23-478C2.1; UPF0474 protein C5orf41 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391726,918,716 - 26,995,611 (+)NCBIGRCm39mm39
GRCm39 Ensembl1726,934,624 - 26,995,609 (+)Ensembl
GRCm381726,715,594 - 26,776,637 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1726,715,650 - 26,776,635 (+)EnsemblGRCm38mm10GRCm38
MGSCv371726,852,595 - 26,913,573 (+)NCBIGRCm37mm9NCBIm37
MGSCv361726,443,240 - 26,500,610 (+)NCBImm8
Celera1727,252,264 - 27,313,223 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
1,3-dinitrobenzene  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
5-aza-2'-deoxycytidine  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
avobenzone  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (EXP)
bisphenol A  (EXP,ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
chloroprene  (ISO)
cisplatin  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP,ISO)
crotonaldehyde  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dioxygen  (EXP,ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
ethyl methanesulfonate  (ISO)
fenvalerate  (ISO)
fluoranthene  (EXP)
formaldehyde  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
leflunomide  (ISO)
metformin  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
miconazole  (EXP)
nickel atom  (ISO)
nickel dichloride  (ISO)
paracetamol  (ISO)
perfluorononanoic acid  (ISO)
potassium chromate  (ISO)
quinolin-8-ol  (ISO)
rac-lactic acid  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sirolimus  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP)
thalidomide  (ISO)
titanium dioxide  (EXP)
tremolite asbestos  (EXP)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (EXP)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15840001   PMID:16141072   PMID:16141073   PMID:17967808  
PMID:18391022   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:23071095   PMID:23400243   PMID:32901804  


Genomics

Comparative Map Data
Crebrf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391726,918,716 - 26,995,611 (+)NCBIGRCm39mm39
GRCm39 Ensembl1726,934,624 - 26,995,609 (+)Ensembl
GRCm381726,715,594 - 26,776,637 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1726,715,650 - 26,776,635 (+)EnsemblGRCm38mm10GRCm38
MGSCv371726,852,595 - 26,913,573 (+)NCBIGRCm37mm9NCBIm37
MGSCv361726,443,240 - 26,500,610 (+)NCBImm8
Celera1727,252,264 - 27,313,223 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
CREBRF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5173,056,352 - 173,139,284 (+)EnsemblGRCh38hg38GRCh38
GRCh385173,056,349 - 173,139,284 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh375172,483,355 - 172,566,287 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365172,415,976 - 172,496,576 (+)NCBINCBI36hg18NCBI36
Celera5168,516,821 - 168,599,691 (+)NCBI
Cytogenetic Map5q35.1NCBI
HuRef5167,577,727 - 167,660,756 (+)NCBIHuRef
CHM1_15171,916,093 - 171,998,823 (+)NCBICHM1_1
Crebrf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21016,399,170 - 16,479,650 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl1016,694,792 - 16,752,205 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01016,693,846 - 16,753,162 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01016,582,414 - 16,661,883 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41016,665,420 - 16,723,929 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11016,668,717 - 16,724,978 (-)NCBI
Celera1016,064,097 - 16,120,536 (-)NCBICelera
Cytogenetic Map10q12NCBI
Crebrf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540825,719,187 - 25,774,555 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540825,718,523 - 25,769,551 (+)NCBIChiLan1.0ChiLan1.0
CREBRF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15175,318,644 - 175,401,330 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5175,318,674 - 175,403,334 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05168,409,668 - 168,492,678 (+)NCBIMhudiblu_PPA_v0panPan3
CREBRF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1439,308,429 - 39,366,031 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl439,313,512 - 39,365,953 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha439,253,882 - 39,311,481 (-)NCBI
ROS_Cfam_1.0439,679,380 - 39,737,014 (-)NCBI
UMICH_Zoey_3.1439,496,142 - 39,553,778 (-)NCBI
UNSW_CanFamBas_1.0439,685,871 - 39,743,521 (-)NCBI
UU_Cfam_GSD_1.0440,194,925 - 40,252,631 (-)NCBI
Crebrf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721393,738,135 - 93,775,972 (-)NCBI
SpeTri2.0NW_0049366092,460,379 - 2,498,614 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CREBRF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1651,150,560 - 51,260,685 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11651,146,015 - 51,210,806 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21655,459,289 - 55,523,885 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CREBRF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12375,219,847 - 75,302,641 (+)NCBI
ChlSab1.1 Ensembl2375,219,873 - 75,297,114 (+)Ensembl
Vero_WHO_p1.0NW_0236660343,307,959 - 3,391,600 (-)NCBI
Crebrf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473316,952,319 - 17,017,396 (-)NCBI

Position Markers
D17Mit80  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381726,722,888 - 26,723,032UniSTSGRCm38
MGSCv371726,859,833 - 26,859,977UniSTSGRCm37
Celera1727,259,503 - 27,259,645UniSTS
Cytogenetic Map17B1UniSTS
cM Map1712.9UniSTS
Whitehead Genetic174.4UniSTS
Whitehead_YAC17 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17126862710Mouse
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17126862710Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17128979566Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17128979566Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17128979566Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17130809908Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17312791337128037Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17392461548559063Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17480447727496965Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined480447745359340Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17480447746158776Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17480447747574740Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined480447765330362Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17667496240674962Mouse
4141608Phl1_mprogressive hearing loss 1 (mouse)Not determined17765701129268449Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17836594042366175Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17836594042366175Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined17986241186688972Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171065914544659245Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1098759739053168Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1166699745667145Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171177921045779210Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171206732483054339Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171223281346232813Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171242798746427987Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171390439847904522Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171484267848842786Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171484267848842786Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171484267848842786Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171484267848842786Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171660074750600869Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171660074750600869Mouse
1301505Tir1_mtrypanosome infection response 1 (mouse)Not determined171660074750600869Mouse
1302038Radpf1_mradiation pulmonary fibrosis 1 (mouse)Not determined171661519333600869Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171681096950811104Mouse
1302042Acsns3_mAngiostrongylus costaricensis nematode susceptibility 3 (mouse)Not determined171724323451243371Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171724323451243371Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171724323451243371Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171724323451243371Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171724323451243371Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171795643651959238Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171819938152202007Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171820316552205351Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171883413352834133Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172430185958301973Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172485760955405969Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172536594043665344Mouse
12903990Opfaq5_mopen field activity QTL 5 (mouse)172573195128773124Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172574029459740461Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172618203852604676Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172628636340794146Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172657408160574223Mouse
12904013Cfq12_mconditioned fear QTL 12 (mouse)172660980730445981Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2306
Count of miRNA genes:796
Interacting mature miRNAs:1120
Transcripts:ENSMUST00000062519, ENSMUST00000132972, ENSMUST00000142539, ENSMUST00000144221, ENSMUST00000151681, ENSMUST00000176845
Prediction methods:Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_029870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011246717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017317723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC144621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC113191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC113192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000062519   ⟹   ENSMUSP00000059102
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1726,715,650 - 26,776,635 (+)Ensembl
RefSeq Acc Id: ENSMUST00000132972
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1726,742,984 - 26,758,187 (+)Ensembl
RefSeq Acc Id: ENSMUST00000142539   ⟹   ENSMUSP00000114274
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1726,715,710 - 26,764,259 (+)Ensembl
RefSeq Acc Id: ENSMUST00000144221   ⟹   ENSMUSP00000120212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1726,715,655 - 26,742,959 (+)Ensembl
RefSeq Acc Id: ENSMUST00000151681   ⟹   ENSMUSP00000119186
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1726,715,724 - 26,762,298 (+)Ensembl
RefSeq Acc Id: ENSMUST00000176845
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1726,757,702 - 26,759,919 (+)Ensembl
RefSeq Acc Id: NM_029870   ⟹   NP_084146
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,934,624 - 26,995,602 (+)NCBI
GRCm381726,715,650 - 26,776,628 (+)NCBI
MGSCv371726,852,595 - 26,913,573 (+)RGD
Celera1727,252,264 - 27,313,223 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011246717   ⟹   XP_011245019
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,934,618 - 26,995,611 (+)NCBI
GRCm381726,715,594 - 26,776,637 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017317723   ⟹   XP_017173212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,934,625 - 26,995,611 (+)NCBI
GRCm381726,715,594 - 26,776,637 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160833   ⟹   XP_036016726
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,918,716 - 26,995,611 (+)NCBI
RefSeq Acc Id: XM_036160834   ⟹   XP_036016727
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,935,248 - 26,995,611 (+)NCBI
RefSeq Acc Id: XM_036160835   ⟹   XP_036016728
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,935,248 - 26,995,611 (+)NCBI
RefSeq Acc Id: XM_036160836   ⟹   XP_036016729
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,934,698 - 26,995,611 (+)NCBI
RefSeq Acc Id: XM_036160837   ⟹   XP_036016730
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,934,634 - 26,995,611 (+)NCBI
RefSeq Acc Id: XM_036160838   ⟹   XP_036016731
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,934,620 - 26,995,611 (+)NCBI
RefSeq Acc Id: XM_036160839   ⟹   XP_036016732
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,934,721 - 26,995,611 (+)NCBI
RefSeq Acc Id: XM_036160840   ⟹   XP_036016733
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391726,958,670 - 26,995,611 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_084146   ⟸   NM_029870
- UniProtKB: Q8CDG5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011245019   ⟸   XM_011246717
- Peptide Label: isoform X1
- UniProtKB: Q8CDG5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017173212   ⟸   XM_017317723
- Peptide Label: isoform X1
- UniProtKB: Q8CDG5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000120212   ⟸   ENSMUST00000144221
RefSeq Acc Id: ENSMUSP00000119186   ⟸   ENSMUST00000151681
RefSeq Acc Id: ENSMUSP00000059102   ⟸   ENSMUST00000062519
RefSeq Acc Id: ENSMUSP00000114274   ⟸   ENSMUST00000142539
RefSeq Acc Id: XP_036016726   ⟸   XM_036160833
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036016731   ⟸   XM_036160838
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036016730   ⟸   XM_036160837
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036016729   ⟸   XM_036160836
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036016732   ⟸   XM_036160839
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036016727   ⟸   XM_036160834
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036016728   ⟸   XM_036160835
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036016733   ⟸   XM_036160840
- Peptide Label: isoform X4
Protein Domains
bZIP

Promoters
RGD ID:13675254
Promoter ID:EPDNEW_M21776
Type:initiation region
Name:Crebrf_1
Description:Mus musculus CREB3 regulatory factor , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381726,715,678 - 26,715,738EPDNEW
RGD ID:6828610
Promoter ID:MM_KWN:22696
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_029870_A930001N09RIK,   OTTMUST00000083275,   OTTMUST00000083278,   UC008BEJ.1,   UC008BEK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361726,852,286 - 26,853,032 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1924378 AgrOrtholog
Ensembl Genes ENSMUSG00000048249 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000059102 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000114274 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000119186 UniProtKB/TrEMBL
  ENSMUSP00000120212 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000062519 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000142539 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000144221 UniProtKB/TrEMBL
  ENSMUST00000151681 UniProtKB/TrEMBL
InterPro bZIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CREBRF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:77128 UniProtKB/Swiss-Prot
MGD MGI:1924378 ENTREZGENE
NCBI Gene 77128 ENTREZGENE
PANTHER PTHR21552 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Crebrf PhenoGen
PROSITE BZIP_BASIC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B8JJI0_MOUSE UniProtKB/TrEMBL
  B8JJI2_MOUSE UniProtKB/TrEMBL
  B8JJI3_MOUSE UniProtKB/TrEMBL
  CRERF_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary B8JJI1 UniProtKB/Swiss-Prot
  Q14DI2 UniProtKB/Swiss-Prot
  Q8C8N7 UniProtKB/Swiss-Prot
  Q9CTQ7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-11-27 Crebrf  CREB3 regulatory factor  A930001N09Rik  RIKEN cDNA A930001N09 gene  Symbol and/or name change 5135510 APPROVED