Rmnd5a (required for meiotic nuclear division 5 homolog A) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Rmnd5a (required for meiotic nuclear division 5 homolog A) Mus musculus
Analyze
Symbol: Rmnd5a
Name: required for meiotic nuclear division 5 homolog A
RGD ID: 1320277
MGI Page MGI
Description: Predicted to contribute to ubiquitin-protein transferase activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to localize to several cellular components, including GID complex; nucleoplasm; and ubiquitin ligase complex. Orthologous to human RMND5A (required for meiotic nuclear division 5 homolog A); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1110007A06Rik; AJ237586; AW125795; E3 ubiquitin-protein ligase RMND5A; Gid; Gid2; MGC59617; MTA.D02.090; protein RMD5 homolog A
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm19186  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39671,365,618 - 71,417,621 (-)NCBIGRCm39mm39
GRCm38671,388,634 - 71,440,637 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl671,388,634 - 71,440,637 (-)EnsemblGRCm38mm10GRCm38
MGSCv37671,338,628 - 71,390,631 (-)NCBIGRCm37mm9NCBIm37
MGSCv36671,320,760 - 71,369,997 (-)NCBImm8
Celera673,468,007 - 73,519,967 (-)NCBICelera
Cytogenetic Map6C1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,ISO)
GID complex  (IBA)
nucleoplasm  (ISO)
nucleus  (IBA,ISO)
ubiquitin ligase complex  (ISO)

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10630289   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:21873635   PMID:32325033  


Genomics

Comparative Map Data
Rmnd5a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39671,365,618 - 71,417,621 (-)NCBIGRCm39mm39
GRCm38671,388,634 - 71,440,637 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl671,388,634 - 71,440,637 (-)EnsemblGRCm38mm10GRCm38
MGSCv37671,338,628 - 71,390,631 (-)NCBIGRCm37mm9NCBIm37
MGSCv36671,320,760 - 71,369,997 (-)NCBImm8
Celera673,468,007 - 73,519,967 (-)NCBICelera
Cytogenetic Map6C1NCBI
RMND5A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl286,720,291 - 86,778,041 (+)EnsemblGRCh38hg38GRCh38
GRCh38286,720,291 - 86,778,041 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37286,947,414 - 87,005,164 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36286,801,204 - 86,855,943 (+)NCBINCBI36hg18NCBI36
Celera286,775,282 - 86,832,969 (+)NCBI
Cytogenetic Map2p11.2NCBI
HuRef286,854,361 - 86,891,435 (+)NCBIHuRef
CHM1_1286,877,395 - 86,935,185 (+)NCBICHM1_1
Rmnd5a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0499,249,159 - 99,305,805 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl499,253,633 - 99,305,812 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04164,027,677 - 164,084,308 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44104,603,984 - 104,657,016 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14104,847,390 - 104,901,908 (-)NCBI
Celera492,548,552 - 92,605,302 (-)NCBICelera
Cytogenetic Map4q31NCBI
Rmnd5a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955424983,275 - 1,034,160 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955424983,275 - 1,034,160 (-)NCBIChiLan1.0ChiLan1.0
RMND5A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A88,311,994 - 88,369,849 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A88,312,091 - 88,369,849 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A86,768,106 - 86,826,000 (+)NCBIMhudiblu_PPA_v0panPan3
RMND5A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1738,412,967 - 38,472,395 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11738,408,946 - 38,472,342 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Rmnd5a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936712892,777 - 927,930 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RMND5A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl358,037,766 - 58,096,721 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1358,038,024 - 58,096,852 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2360,805,128 - 60,844,468 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RMND5A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1418,892,316 - 18,954,066 (-)Ensembl
ChlSab1.11418,892,450 - 18,954,348 (-)NCBI
Rmnd5a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474916,574,317 - 16,626,109 (-)NCBI

Position Markers
AU024348  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38671,391,519 - 71,391,608UniSTSGRCm38
GRCm38541,730,446 - 41,730,536UniSTSGRCm38
MGSCv37671,341,513 - 71,341,602UniSTSGRCm37
MGSCv37542,121,685 - 42,121,775UniSTSGRCm37
Celera673,470,892 - 73,470,981UniSTS
Celera539,188,593 - 39,188,683UniSTS
Cytogenetic Map6C1UniSTS
Whitehead/MRC_RH6699.94UniSTS
RH129483  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810102,361,751 - 102,361,947UniSTSGRCm38
GRCm38671,388,674 - 71,388,873UniSTSGRCm38
MGSCv3710101,824,385 - 101,824,581UniSTSGRCm37
MGSCv37671,338,668 - 71,338,867UniSTSGRCm37
Celera10104,295,961 - 104,296,157UniSTS
Celera673,468,047 - 73,468,246UniSTS
Cytogenetic Map6C1UniSTS
Cytogenetic Map10D1UniSTS
UniSTS:235466  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38671,425,586 - 71,425,785UniSTSGRCm38
MGSCv37671,375,580 - 71,375,779UniSTSGRCm37
Celera673,504,959 - 73,505,158UniSTS
Cytogenetic Map6C1UniSTS
UniSTS:235471  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38671,391,523 - 71,391,828UniSTSGRCm38
MGSCv37671,341,517 - 71,341,822UniSTSGRCm37
Celera673,470,896 - 73,471,201UniSTS
Cytogenetic Map6C1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414873387692Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3285065078238974Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
12880424V25Dq4_mvitamin D inactive form serum level QTL 4 (mouse)64160000075600000Mouse
1301266Lmr4_mleishmaniasis resistance 4 (mouse)Not determined64211637376116515Mouse
11040600Lmr4c_mleishmaniasis resistance 4c (mouse)64211637376116515Mouse
11040601Lmr4a_mleishmaniasis resistance 4a (mouse)64211637376116515Mouse
11533915Mts4_mmammary tumor susceptibility 4 (mouse)64211637376116515Mouse
12910785Pwgrq16_mpost-weaning growth rate QTL 16 (mouse)64382681377811523Mouse
12910798Pwgrq5_mpre-weaning growth rate QTL 5 (mouse)64382681377811523Mouse
12910802Pwbwq12_mpost-weaning body weight QTL 12 (mouse)64382681377811523Mouse
12910807Pwbwq11_mpost-weaning body weight QTL 11 (mouse)64382681377811523Mouse
12910809Pwbwq10_mpost-weaning body weight QTL 10 (mouse)64382681377811523Mouse
12910820Ogrq3_moverall growth rate QTL 3 (mouse)64382681377811523Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
4140983Srilp_msleep response to influenza, light phase (mouse)Not determined4872655675447710Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2966
Count of miRNA genes:741
Interacting mature miRNAs:1002
Transcripts:ENSMUST00000002292, ENSMUST00000123947, ENSMUST00000140696, ENSMUST00000144081, ENSMUST00000149415
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_024288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC160090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ237586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF748545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000002292   ⟹   ENSMUSP00000002292
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl671,388,634 - 71,440,637 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123947
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl671,394,460 - 71,397,198 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140696
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl671,391,334 - 71,396,187 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144081
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl671,390,467 - 71,396,282 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149415   ⟹   ENSMUSP00000115130
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl671,388,887 - 71,399,293 (-)Ensembl
RefSeq Acc Id: NM_001355745   ⟹   NP_001342674
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39671,365,618 - 71,417,621 (-)NCBI
GRCm38671,388,634 - 71,440,637 (-)NCBI
Sequence:
RefSeq Acc Id: NM_024288   ⟹   NP_077250
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39671,365,618 - 71,417,621 (-)NCBI
GRCm38671,388,634 - 71,440,637 (-)NCBI
MGSCv37671,338,628 - 71,390,631 (-)RGD
Celera673,468,007 - 73,519,967 (-)RGD
cM Map6 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_077250   ⟸   NM_024288
- UniProtKB: Q80YQ8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001342674   ⟸   NM_001355745
RefSeq Acc Id: ENSMUSP00000115130   ⟸   ENSMUST00000149415
RefSeq Acc Id: ENSMUSP00000002292   ⟸   ENSMUST00000002292
Protein Domains
CTLH   LisH   RING-Gid-type

Promoters
RGD ID:6839849
Promoter ID:MM_KWN:46420
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Spleen
Transcripts:OTTMUST00000056932,   OTTMUST00000056933
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36671,346,984 - 71,347,484 (-)MPROMDB
RGD ID:6839846
Promoter ID:MM_KWN:46421
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000056931
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36671,347,876 - 71,348,376 (-)MPROMDB
RGD ID:6839848
Promoter ID:MM_KWN:46422
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000056934
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36671,348,671 - 71,349,171 (-)MPROMDB
RGD ID:6839847
Promoter ID:MM_KWN:46423
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_024288
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36671,390,171 - 71,391,427 (-)MPROMDB
RGD ID:6889966
Promoter ID:EPDNEW_M8434
Type:initiation region
Name:Rmnd5a_3
Description:Mus musculus required for meiotic nuclear division 5 homologA , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8435  EPDNEW_M8436  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38671,399,343 - 71,399,403EPDNEW
RGD ID:6889968
Promoter ID:EPDNEW_M8435
Type:initiation region
Name:Rmnd5a_2
Description:Mus musculus required for meiotic nuclear division 5 homologA , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8434  EPDNEW_M8436  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38671,440,498 - 71,440,558EPDNEW
RGD ID:6889970
Promoter ID:EPDNEW_M8436
Type:multiple initiation site
Name:Rmnd5a_1
Description:Mus musculus required for meiotic nuclear division 5 homologA , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8434  EPDNEW_M8435  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38671,440,631 - 71,440,691EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915727 AgrOrtholog
Ensembl Genes ENSMUSG00000002222 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000002292 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000115130 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000002292 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000149415 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
InterPro CRA_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CTLH/CRA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CTLH_C UniProtKB/Swiss-Prot
  LisH UniProtKB/Swiss-Prot
  RMD5A_dRING UniProtKB/Swiss-Prot
  ZF_RING_GID UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf-RING_LisH UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report mmu:68477 UniProtKB/Swiss-Prot
MGD MGI:1915727 ENTREZGENE
NCBI Gene 68477 ENTREZGENE
Pfam CLTH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-RING_UBOX UniProtKB/TrEMBL
PhenoGen Rmnd5a PhenoGen
PROSITE CTLH UniProtKB/Swiss-Prot
  LISH UniProtKB/Swiss-Prot
  ZF_RING_GID UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CRA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CTLH UniProtKB/Swiss-Prot
  LisH UniProtKB/Swiss-Prot
UniGene Mm.28474 ENTREZGENE
UniProt F6V8A7_MOUSE UniProtKB/TrEMBL
  Q80YQ8 ENTREZGENE
  Q9JK27_MOUSE UniProtKB/TrEMBL
  RMD5A_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary E9QNK7 UniProtKB/Swiss-Prot
  Q3TPH1 UniProtKB/Swiss-Prot
  Q3UFE2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-29 Rmnd5a  required for meiotic nuclear division 5 homolog A    required for meiotic nuclear division 5 homolog A (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED