Dysf (dysferlin) - Rat Genome Database

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Gene: Dysf (dysferlin) Mus musculus
Analyze
Symbol: Dysf
Name: dysferlin
RGD ID: 1322256
MGI Page MGI
Description: Enables alpha-tubulin binding activity and microtubule binding activity. Involved in vesicle fusion. Acts upstream of or within several processes, including myeloid cell activation involved in immune response; negative regulation of macromolecule metabolic process; and plasma membrane organization. Located in several cellular components, including T-tubule; lamellipodium; and microtubule. Is expressed in heart ventricle. Used to study autosomal recessive limb-girdle muscular dystrophy type 2B and distal myopathy. Human ortholog(s) of this gene implicated in Miyoshi muscular dystrophy 1; autosomal recessive limb-girdle muscular dystrophy type 2B; distal myopathy with anterior tibial onset; and muscular dystrophy. Orthologous to human DYSF (dysferlin).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310004N10Rik; AI604795; D6Pas3; dysferlin variant a; dysferlin_a; dystrophy-associated fer-1-like protein; fer-1-like protein 1; mFLJ00175
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39683,985,344 - 84,188,042 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl683,985,572 - 84,188,042 (+)EnsemblGRCm39 Ensembl
GRCm38684,008,361 - 84,211,060 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl684,008,590 - 84,211,060 (+)EnsemblGRCm38mm10GRCm38
MGSCv37683,958,584 - 84,161,036 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36683,985,176 - 84,176,489 (+)NCBIMGSCv36mm8
Celera685,991,070 - 86,190,755 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map636.14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP,ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
5-aza-2'-deoxycytidine  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
amiloride  (ISO)
amitrole  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
benzo[e]pyrene  (ISO)
beta-naphthoflavone  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
cantharidin  (EXP)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
crocidolite asbestos  (EXP)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (EXP)
doxorubicin  (ISO)
endosulfan  (ISO)
epoxiconazole  (EXP)
ethylparaben  (ISO)
folic acid  (EXP)
FR900359  (ISO)
fulvestrant  (ISO)
indoles  (ISO)
methamphetamine  (EXP)
methapyrilene  (ISO)
methimazole  (ISO)
methoxychlor  (ISO)
methylisothiazolinone  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-nitrosodimethylamine  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
permethrin  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
propiconazole  (ISO)
rotenone  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP)
topotecan  (ISO)
tributylstannane  (ISO)
trichloroethene  (ISO)
triclosan  (ISO)
triptonide  (EXP)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Dysferlin, a novel skeletal muscle gene, is mutated in Miyoshi myopathy and limb girdle muscular dystrophy. Liu J, etal., Nat Genet. 1998 Sep;20(1):31-6.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10508505   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11234777   PMID:11891182   PMID:11959863   PMID:12226475   PMID:12477932   PMID:12736685   PMID:14506282  
PMID:14610273   PMID:14691545   PMID:15254015   PMID:15449545   PMID:15741177   PMID:15811552   PMID:15835269   PMID:16024047   PMID:16141072   PMID:16141073   PMID:16237120   PMID:16288871  
PMID:16306063   PMID:16319126   PMID:16371353   PMID:16916601   PMID:17148677   PMID:17185750   PMID:17331981   PMID:17452335   PMID:17607357   PMID:17612291   PMID:17828519   PMID:18096699  
PMID:18276788   PMID:18325335   PMID:18454193   PMID:18799693   PMID:18815587   PMID:19001151   PMID:19143834   PMID:19218742   PMID:19286669   PMID:19301206   PMID:19380584   PMID:19436707  
PMID:19834057   PMID:19875504   PMID:19923419   PMID:20154340   PMID:20405035   PMID:20413686   PMID:20544921   PMID:20558759   PMID:20724702   PMID:21060153   PMID:21079765   PMID:21119217  
PMID:21127009   PMID:21364666   PMID:21677750   PMID:21873635   PMID:21941430   PMID:22043020   PMID:22110769   PMID:22132688   PMID:22253476   PMID:22427904   PMID:22465227   PMID:22560623  
PMID:22666441   PMID:22682622   PMID:23185377   PMID:23274062   PMID:23332128   PMID:23624156   PMID:23715556   PMID:23777246   PMID:23857504   PMID:24177035   PMID:24203699   PMID:24239457  
PMID:24244862   PMID:24302765   PMID:24315098   PMID:24572254   PMID:24600403   PMID:24655396   PMID:24662047   PMID:24685690   PMID:24687993   PMID:24784578   PMID:24967968   PMID:25198651  
PMID:25904108   PMID:25920768   PMID:26060189   PMID:26073173   PMID:26112643   PMID:26206886   PMID:26403541   PMID:26415898   PMID:26454207   PMID:26464793   PMID:26790476   PMID:26884322  
PMID:26927626   PMID:27070822   PMID:27834955   PMID:28082118   PMID:28104817   PMID:28334824   PMID:28412297   PMID:28568606   PMID:28707952   PMID:28823869   PMID:29130937   PMID:29159199  
PMID:29175948   PMID:29206970   PMID:29771357   PMID:30292141   PMID:30970035   PMID:31160583   PMID:31203232   PMID:31218594   PMID:31323135   PMID:31351140   PMID:31404091   PMID:31653658  
PMID:31776291   PMID:31852847   PMID:31890729   PMID:32293933   PMID:32325033   PMID:32348180   PMID:32572487   PMID:32736698   PMID:32839504   PMID:32881965   PMID:32893434   PMID:32994313  
PMID:33311457   PMID:34354129   PMID:34366880   PMID:34831431   PMID:35028538   PMID:35790299   PMID:35880824   PMID:36400788   PMID:36402750   PMID:36613515   PMID:36653852   PMID:37169038  
PMID:37599828  


Genomics

Comparative Map Data
Dysf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39683,985,344 - 84,188,042 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl683,985,572 - 84,188,042 (+)EnsemblGRCm39 Ensembl
GRCm38684,008,361 - 84,211,060 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl684,008,590 - 84,211,060 (+)EnsemblGRCm38mm10GRCm38
MGSCv37683,958,584 - 84,161,036 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36683,985,176 - 84,176,489 (+)NCBIMGSCv36mm8
Celera685,991,070 - 86,190,755 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map636.14NCBI
DYSF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38271,453,561 - 71,686,763 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl271,453,561 - 71,686,763 (+)EnsemblGRCh38hg38GRCh38
GRCh37271,680,691 - 71,913,893 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36271,534,268 - 71,767,401 (+)NCBINCBI36Build 36hg18NCBI36
Build 34271,592,414 - 71,825,547NCBI
Celera271,531,488 - 71,764,393 (+)NCBICelera
Cytogenetic Map2p13.2NCBI
HuRef271,417,813 - 71,651,420 (+)NCBIHuRef
CHM1_1271,610,103 - 71,843,209 (+)NCBICHM1_1
T2T-CHM13v2.0271,464,487 - 71,699,459 (+)NCBIT2T-CHM13v2.0
Dysf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84118,048,460 - 118,248,273 (+)NCBIGRCr8
mRatBN7.24116,490,877 - 116,690,709 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4116,490,616 - 116,690,709 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4121,983,927 - 122,171,488 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04117,759,103 - 117,946,672 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04116,372,867 - 116,560,019 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04115,700,942 - 115,901,873 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4115,712,850 - 115,901,873 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04180,288,855 - 180,487,010 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44118,213,435 - 118,371,283 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14118,457,915 - 118,629,177 (+)NCBI
Celera4105,495,200 - 105,681,284 (+)NCBICelera
Cytogenetic Map4q34NCBI
Dysf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542413,756,130 - 13,970,436 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542413,756,130 - 13,970,437 (-)NCBIChiLan1.0ChiLan1.0
DYSF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21254,703,585 - 54,938,220 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A54,706,330 - 54,940,927 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A71,495,573 - 71,730,073 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A72,994,889 - 73,228,846 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A72,994,888 - 73,228,846 (+)Ensemblpanpan1.1panPan2
DYSF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11751,011,197 - 51,228,969 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1751,011,197 - 51,228,876 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1750,660,840 - 50,877,038 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01751,883,528 - 52,100,122 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1751,883,544 - 52,100,074 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11750,890,621 - 51,106,714 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01750,956,991 - 51,173,487 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01751,531,225 - 51,747,532 (-)NCBIUU_Cfam_GSD_1.0
Dysf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629212,952,773 - 13,158,562 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649115,413,206 - 15,618,519 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649115,412,606 - 15,618,519 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DYSF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl371,020,144 - 71,246,967 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1371,020,143 - 71,237,658 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2374,464,909 - 74,674,775 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DYSF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11435,488,393 - 35,715,222 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1435,488,391 - 35,651,395 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604576,314,814 - 76,551,407 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dysf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247621,936,775 - 2,166,825 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247621,936,775 - 2,166,817 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dysf
5875 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1984
Count of miRNA genes:509
Interacting mature miRNAs:610
Transcripts:ENSMUST00000081904, ENSMUST00000089595, ENSMUST00000113818, ENSMUST00000113821, ENSMUST00000113823, ENSMUST00000127459, ENSMUST00000128965, ENSMUST00000142711, ENSMUST00000152646, ENSMUST00000153860, ENSMUST00000168387
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63864656092584431Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64529099387403016Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65115613485156284Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652138693116132228Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5435041188356155Mouse
15039373Adip28_madiposity 28 (mouse)65628519490285194Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65628519490285194Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65842456692424693Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65851741692517416Mouse
10412119Stv_mstriatal volumne (mouse)Not determined660026991100026967Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66003466394034782Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66346172197461888Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666690851100691013Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670402880104403016Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670402880104403016Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670402880104403016Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7129960586252701Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67129960593441074Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671552042105552160Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671958006105958152Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671958006105958152Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
12792979Fbmd2_mfemoral bone mineral density 2, females only (mouse)675026989115026943Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675424566104480516Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67552133992584431Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67552133994202936Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67552133994202936Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675584287109584431Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675693484109693678Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676440930110441074Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67707698389976982Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67797698396976961Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678606487121092347Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681476981102176961Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684099474118099474Mouse

Markers in Region
AI604795  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38684,210,818 - 84,210,952UniSTSGRCm38
MGSCv37684,160,812 - 84,160,946UniSTSGRCm37
Celera686,190,531 - 86,190,665UniSTS
Cytogenetic Map6C3UniSTS
cM Map635.85UniSTS
Whitehead/MRC_RH6861.05UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001077694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_021469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC153607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF188290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ566205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ831003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN716462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF041824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF041825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000081904   ⟹   ENSMUSP00000080579
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,996,371 - 84,188,041 (+)Ensembl
GRCm38.p6 Ensembl684,019,389 - 84,211,059 (+)Ensembl
RefSeq Acc Id: ENSMUST00000089595   ⟹   ENSMUSP00000087022
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,996,367 - 84,188,041 (+)Ensembl
GRCm38.p6 Ensembl684,019,385 - 84,211,059 (+)Ensembl
RefSeq Acc Id: ENSMUST00000113818   ⟹   ENSMUSP00000109449
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,996,368 - 84,188,042 (+)Ensembl
GRCm38.p6 Ensembl684,019,386 - 84,211,060 (+)Ensembl
RefSeq Acc Id: ENSMUST00000113821   ⟹   ENSMUSP00000109452
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,985,572 - 84,188,042 (+)Ensembl
GRCm38.p6 Ensembl684,008,590 - 84,211,060 (+)Ensembl
RefSeq Acc Id: ENSMUST00000113823   ⟹   ENSMUSP00000109454
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,985,684 - 84,187,878 (+)Ensembl
GRCm38.p6 Ensembl684,008,702 - 84,210,896 (+)Ensembl
RefSeq Acc Id: ENSMUST00000127459
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl684,082,355 - 84,089,181 (+)Ensembl
GRCm38.p6 Ensembl684,105,373 - 84,112,199 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128965
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl684,187,466 - 84,188,023 (+)Ensembl
GRCm38.p6 Ensembl684,210,484 - 84,211,041 (+)Ensembl
RefSeq Acc Id: ENSMUST00000142711
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl684,123,729 - 84,129,392 (+)Ensembl
GRCm38.p6 Ensembl684,146,747 - 84,152,410 (+)Ensembl
RefSeq Acc Id: ENSMUST00000152646
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl684,083,533 - 84,093,861 (+)Ensembl
GRCm38.p6 Ensembl684,106,551 - 84,116,879 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153860   ⟹   ENSMUSP00000145518
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,985,749 - 84,187,878 (+)Ensembl
GRCm38.p6 Ensembl684,008,767 - 84,210,896 (+)Ensembl
RefSeq Acc Id: ENSMUST00000168387   ⟹   ENSMUSP00000132297
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,985,897 - 84,188,041 (+)Ensembl
GRCm38.p6 Ensembl684,008,915 - 84,211,059 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203695   ⟹   ENSMUSP00000145292
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,996,367 - 84,187,839 (+)Ensembl
GRCm38.p6 Ensembl684,019,385 - 84,210,857 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203803   ⟹   ENSMUSP00000145511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,985,684 - 84,187,878 (+)Ensembl
GRCm38.p6 Ensembl684,008,702 - 84,210,896 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204354   ⟹   ENSMUSP00000144705
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,996,367 - 84,187,839 (+)Ensembl
GRCm38.p6 Ensembl684,019,385 - 84,210,857 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204591   ⟹   ENSMUSP00000144970
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,985,684 - 84,187,878 (+)Ensembl
GRCm38.p6 Ensembl684,008,702 - 84,210,896 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204987   ⟹   ENSMUSP00000144748
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl683,996,367 - 84,187,839 (+)Ensembl
GRCm38.p6 Ensembl684,019,385 - 84,210,857 (+)Ensembl
RefSeq Acc Id: NM_001077694   ⟹   NP_001071162
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,985,580 - 84,188,041 (+)NCBI
GRCm38684,008,598 - 84,211,059 (+)NCBI
MGSCv37683,958,584 - 84,161,036 (+)RGD
Celera685,991,078 - 86,190,772 (+)NCBI
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001310152   ⟹   NP_001297081
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,368 - 84,188,041 (+)NCBI
GRCm38684,019,386 - 84,211,059 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001403655   ⟹   NP_001390584
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,985,504 - 84,188,024 (+)NCBI
RefSeq Acc Id: NM_001403656   ⟹   NP_001390585
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,985,504 - 84,188,024 (+)NCBI
RefSeq Acc Id: NM_001403657   ⟹   NP_001390586
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,355 - 84,188,024 (+)NCBI
RefSeq Acc Id: NM_001403658   ⟹   NP_001390587
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,355 - 84,188,024 (+)NCBI
RefSeq Acc Id: NM_021469   ⟹   NP_067444
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,355 - 84,188,024 (+)NCBI
GRCm38684,019,386 - 84,211,059 (+)NCBI
MGSCv37683,958,584 - 84,161,036 (+)RGD
Celera685,991,078 - 86,190,772 (+)NCBI
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006506163   ⟹   XP_006506226
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,240 - 84,188,042 (+)NCBI
GRCm38684,019,263 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506164   ⟹   XP_006506227
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,985,344 - 84,188,042 (+)NCBI
GRCm38684,008,361 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506165   ⟹   XP_006506228
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,240 - 84,188,042 (+)NCBI
GRCm38684,019,263 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506166   ⟹   XP_006506229
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,240 - 84,188,042 (+)NCBI
GRCm38684,019,263 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506167   ⟹   XP_006506230
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,241 - 84,188,042 (+)NCBI
GRCm38684,019,264 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506168   ⟹   XP_006506231
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,240 - 84,188,042 (+)NCBI
GRCm38684,019,263 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506169   ⟹   XP_006506232
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,240 - 84,188,042 (+)NCBI
GRCm38684,019,263 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506170   ⟹   XP_006506233
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,241 - 84,188,042 (+)NCBI
GRCm38684,019,264 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506171   ⟹   XP_006506234
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,985,344 - 84,188,042 (+)NCBI
GRCm38684,008,361 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506172   ⟹   XP_006506235
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,241 - 84,188,026 (+)NCBI
GRCm38684,019,264 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506174   ⟹   XP_006506237
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,500 - 84,188,042 (+)NCBI
GRCm38684,019,264 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506175   ⟹   XP_006506238
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,985,344 - 84,188,042 (+)NCBI
GRCm38684,008,361 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506177   ⟹   XP_006506240
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,985,344 - 84,188,042 (+)NCBI
GRCm38684,008,361 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506181   ⟹   XP_006506244
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,985,344 - 84,188,042 (+)NCBI
GRCm38684,008,361 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506182   ⟹   XP_006506245
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,220 - 84,158,439 (+)NCBI
GRCm38684,019,252 - 84,181,457 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506183   ⟹   XP_006506246
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,219 - 84,136,437 (+)NCBI
GRCm38684,019,252 - 84,159,467 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006506184   ⟹   XP_006506247
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,221 - 84,134,149 (+)NCBI
GRCm38684,019,254 - 84,157,167 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321594   ⟹   XP_017177083
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39684,083,538 - 84,188,042 (+)NCBI
GRCm38684,106,556 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255407   ⟹   XP_030111267
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,241 - 84,188,042 (+)NCBI
GRCm38684,019,264 - 84,211,060 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004942962
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,095 - 84,114,381 (+)NCBI
Sequence:
RefSeq Acc Id: XR_377460
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,218 - 84,169,939 (+)NCBI
GRCm38684,019,250 - 84,192,957 (+)NCBI
Sequence:
RefSeq Acc Id: XR_377461
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,996,220 - 84,169,939 (+)NCBI
GRCm38684,019,253 - 84,190,897 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001071162 (Get FASTA)   NCBI Sequence Viewer  
  NP_001297081 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390584 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390585 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390586 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390587 (Get FASTA)   NCBI Sequence Viewer  
  NP_067444 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506226 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506227 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506228 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506229 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506230 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506231 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506232 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506233 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506234 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506235 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506237 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506238 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506240 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506244 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506245 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506246 (Get FASTA)   NCBI Sequence Viewer  
  XP_006506247 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177083 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111267 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG17046 (Get FASTA)   NCBI Sequence Viewer  
  AAH43692 (Get FASTA)   NCBI Sequence Viewer  
  AAH54421 (Get FASTA)   NCBI Sequence Viewer  
  ABK20182 (Get FASTA)   NCBI Sequence Viewer  
  ABK20183 (Get FASTA)   NCBI Sequence Viewer  
  BAD21394 (Get FASTA)   NCBI Sequence Viewer  
  EDK99114 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000080579
  ENSMUSP00000080579.7
  ENSMUSP00000087022
  ENSMUSP00000087022.6
  ENSMUSP00000109449
  ENSMUSP00000109449.2
  ENSMUSP00000109452
  ENSMUSP00000109452.2
  ENSMUSP00000109454
  ENSMUSP00000109454.2
  ENSMUSP00000132297.2
  ENSMUSP00000144705
  ENSMUSP00000144705.2
  ENSMUSP00000144748
  ENSMUSP00000144748.2
  ENSMUSP00000144970
  ENSMUSP00000144970.2
  ENSMUSP00000145292
  ENSMUSP00000145292.2
  ENSMUSP00000145511
  ENSMUSP00000145511.2
  ENSMUSP00000145518
  ENSMUSP00000145518.2
GenBank Protein Q9ESD7 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001071162   ⟸   NM_001077694
- Peptide Label: isoform 2
- UniProtKB: E9Q423 (UniProtKB/TrEMBL),   A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_067444   ⟸   NM_021469
- Peptide Label: isoform 1
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506227   ⟸   XM_006506164
- Peptide Label: isoform X2
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506234   ⟸   XM_006506171
- Peptide Label: isoform X10
- UniProtKB: A0A0N4SV63 (UniProtKB/TrEMBL),   A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506238   ⟸   XM_006506175
- Peptide Label: isoform X14
- UniProtKB: Q9QXC0 (UniProtKB/Swiss-Prot),   Q9ESD7 (UniProtKB/Swiss-Prot),   Q80VT0 (UniProtKB/Swiss-Prot),   Q6KAR3 (UniProtKB/Swiss-Prot),   A0A0N4SWH3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506240   ⟸   XM_006506177
- Peptide Label: isoform X16
- UniProtKB: Q9QXC0 (UniProtKB/Swiss-Prot),   Q9ESD7 (UniProtKB/Swiss-Prot),   Q80VT0 (UniProtKB/Swiss-Prot),   Q6KAR3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506244   ⟸   XM_006506181
- Peptide Label: isoform X19
- UniProtKB: Q9QXC0 (UniProtKB/Swiss-Prot),   Q9ESD7 (UniProtKB/Swiss-Prot),   Q80VT0 (UniProtKB/Swiss-Prot),   Q6KAR3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506245   ⟸   XM_006506182
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_006506246   ⟸   XM_006506183
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_006506247   ⟸   XM_006506184
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_006506226   ⟸   XM_006506163
- Peptide Label: isoform X1
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506228   ⟸   XM_006506165
- Peptide Label: isoform X3
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506231   ⟸   XM_006506168
- Peptide Label: isoform X7
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506229   ⟸   XM_006506166
- Peptide Label: isoform X4
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506232   ⟸   XM_006506169
- Peptide Label: isoform X8
- UniProtKB: Q9QXC0 (UniProtKB/Swiss-Prot),   Q9ESD7 (UniProtKB/Swiss-Prot),   Q80VT0 (UniProtKB/Swiss-Prot),   Q6KAR3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506230   ⟸   XM_006506167
- Peptide Label: isoform X5
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506235   ⟸   XM_006506172
- Peptide Label: isoform X11
- UniProtKB: A0A0N4SVX9 (UniProtKB/TrEMBL),   A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506233   ⟸   XM_006506170
- Peptide Label: isoform X9
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006506237   ⟸   XM_006506174
- Peptide Label: isoform X13
- UniProtKB: Q9QXC0 (UniProtKB/Swiss-Prot),   Q9ESD7 (UniProtKB/Swiss-Prot),   Q80VT0 (UniProtKB/Swiss-Prot),   Q6KAR3 (UniProtKB/Swiss-Prot),   A0A0N4SUN3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001297081   ⟸   NM_001310152
- Peptide Label: isoform 3
- UniProtKB: Q9QXC0 (UniProtKB/Swiss-Prot),   Q80VT0 (UniProtKB/Swiss-Prot),   Q6KAR3 (UniProtKB/Swiss-Prot),   Q9ESD7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017177083   ⟸   XM_017321594
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_030111267   ⟸   XM_030255407
- Peptide Label: isoform X6
- UniProtKB: A0A0N4SWG7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000144705   ⟸   ENSMUST00000204354
RefSeq Acc Id: ENSMUSP00000145292   ⟸   ENSMUST00000203695
RefSeq Acc Id: ENSMUSP00000145511   ⟸   ENSMUST00000203803
RefSeq Acc Id: ENSMUSP00000109452   ⟸   ENSMUST00000113821
RefSeq Acc Id: ENSMUSP00000109454   ⟸   ENSMUST00000113823
RefSeq Acc Id: ENSMUSP00000109449   ⟸   ENSMUST00000113818
RefSeq Acc Id: ENSMUSP00000144748   ⟸   ENSMUST00000204987
RefSeq Acc Id: ENSMUSP00000144970   ⟸   ENSMUST00000204591
RefSeq Acc Id: ENSMUSP00000080579   ⟸   ENSMUST00000081904
RefSeq Acc Id: ENSMUSP00000132297   ⟸   ENSMUST00000168387
RefSeq Acc Id: ENSMUSP00000087022   ⟸   ENSMUST00000089595
RefSeq Acc Id: ENSMUSP00000145518   ⟸   ENSMUST00000153860
RefSeq Acc Id: NP_001390584   ⟸   NM_001403655
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001390585   ⟸   NM_001403656
- Peptide Label: isoform 5
- UniProtKB: E9QL12 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390586   ⟸   NM_001403657
- Peptide Label: isoform 6
- UniProtKB: E9PXU9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390587   ⟸   NM_001403658
- Peptide Label: isoform 7
- UniProtKB: A0A0N4SUJ2 (UniProtKB/TrEMBL)
Protein Domains
C2   Ferlin C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9ESD7-F1-model_v2 AlphaFold Q9ESD7 1-2090 view protein structure

Promoters
RGD ID:6839206
Promoter ID:MM_KWN:46643
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day3,   3T3L1_Day4,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000113821,   NM_001077694
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36683,958,416 - 83,959,037 (+)MPROMDB
RGD ID:6839208
Promoter ID:MM_KWN:46644
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000113818,   OTTMUST00000053043,   OTTMUST00000053500,   UC009COS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36683,969,134 - 83,969,634 (+)MPROMDB
RGD ID:6890198
Promoter ID:EPDNEW_M8550
Type:initiation region
Name:Dysf_2
Description:Mus musculus dysferlin , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8551  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38684,008,551 - 84,008,611EPDNEW
RGD ID:6890200
Promoter ID:EPDNEW_M8551
Type:multiple initiation site
Name:Dysf_1
Description:Mus musculus dysferlin , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8550  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38684,019,373 - 84,019,433EPDNEW
RGD ID:6839207
Promoter ID:MM_KWN:46650
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000053050
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36684,096,176 - 84,096,676 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1349385 AgrOrtholog
Ensembl Genes ENSMUSG00000033788 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000081904 ENTREZGENE
  ENSMUST00000081904.7 UniProtKB/Swiss-Prot
  ENSMUST00000089595 ENTREZGENE
  ENSMUST00000089595.12 UniProtKB/TrEMBL
  ENSMUST00000113818 ENTREZGENE
  ENSMUST00000113818.8 UniProtKB/Swiss-Prot
  ENSMUST00000113821 ENTREZGENE
  ENSMUST00000113821.8 UniProtKB/TrEMBL
  ENSMUST00000113823 ENTREZGENE
  ENSMUST00000113823.8 UniProtKB/TrEMBL
  ENSMUST00000153860 ENTREZGENE
  ENSMUST00000153860.4 UniProtKB/TrEMBL
  ENSMUST00000168387.8 UniProtKB/Swiss-Prot
  ENSMUST00000203695 ENTREZGENE
  ENSMUST00000203695.3 UniProtKB/TrEMBL
  ENSMUST00000203803 ENTREZGENE
  ENSMUST00000203803.3 UniProtKB/TrEMBL
  ENSMUST00000204354 ENTREZGENE
  ENSMUST00000204354.3 UniProtKB/TrEMBL
  ENSMUST00000204591 ENTREZGENE
  ENSMUST00000204591.3 UniProtKB/TrEMBL
  ENSMUST00000204987 ENTREZGENE
  ENSMUST00000204987.3 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro C2_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2A_Ferlin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2B_Ferlin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2C_Ferlin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2D_Ferlin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2E_Ferlin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2F_Ferlin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FerIin_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ferlin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ferlin_A-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ferlin_B-domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ferlin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peroxin/Ferlin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:26903 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1349385 ENTREZGENE
NCBI Gene 26903 ENTREZGENE
PANTHER C2 DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  OS01G0128800 PROTEIN UniProtKB/TrEMBL
  PTHR12546 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12546:SF44 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPERM VESICLE FUSION PROTEIN FER-1 UniProtKB/TrEMBL
Pfam FerA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FerB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FerI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ferlin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00168 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dysf PhenoGen
PROSITE PS50004 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DysFC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DysFN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FerA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FerB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FerI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00239 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49562 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SUJ2 ENTREZGENE, UniProtKB/TrEMBL
  A0A0N4SUN3 ENTREZGENE, UniProtKB/TrEMBL
  A0A0N4SV63 ENTREZGENE, UniProtKB/TrEMBL
  A0A0N4SVX9 ENTREZGENE, UniProtKB/TrEMBL
  A0A0N4SWG7 ENTREZGENE, UniProtKB/TrEMBL
  A0A0N4SWH3 ENTREZGENE, UniProtKB/TrEMBL
  A0FLF1_MOUSE UniProtKB/TrEMBL
  DYSF_MOUSE UniProtKB/Swiss-Prot
  E9PXU9 ENTREZGENE, UniProtKB/TrEMBL
  E9Q423 ENTREZGENE, UniProtKB/TrEMBL
  E9QL12 ENTREZGENE, UniProtKB/TrEMBL
  Q6KAR3 ENTREZGENE
  Q7TQI2_MOUSE UniProtKB/TrEMBL
  Q80VT0 ENTREZGENE
  Q9ESD7 ENTREZGENE
  Q9QXC0 ENTREZGENE
UniProt Secondary Q6KAR3 UniProtKB/Swiss-Prot
  Q80VT0 UniProtKB/Swiss-Prot
  Q9QXC0 UniProtKB/Swiss-Prot