Mir365-2 (microRNA 365-2) - Rat Genome Database
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Gene: Mir365-2 (microRNA 365-2) Mus musculus
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Symbol: Mir365-2
Name: microRNA 365-2
RGD ID: 1608201
MGI Page MGI
Description: Is expressed in embryo; gut; and pancreas. Orthologous to human MIR365B (microRNA 365b).
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: mir-365-2; Mirn36; Mirn365-2
RGD Orthologs
Human
Rat
Dog
Pig
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391179,617,226 - 79,617,337 (+)NCBIGRCm39mm39
GRCm39 Ensembl1179,617,226 - 79,617,337 (+)Ensembl
GRCm381179,726,400 - 79,726,511 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1179,726,400 - 79,726,511 (+)EnsemblGRCm38mm10GRCm38
MGSCv371179,539,902 - 79,540,013 (+)NCBIGRCm37mm9NCBIm37
Celera1189,359,011 - 89,359,122 (+)NCBICelera
Cytogenetic Map11B5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
hepatitis B  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15735639   PMID:16369549   PMID:16381832   PMID:17369397   PMID:17604727   PMID:17936263   PMID:18723672   PMID:20215419   PMID:20413612   PMID:20439489   PMID:20548288   PMID:21037258  
PMID:21267068   PMID:21822254  


Genomics

Comparative Map Data
Mir365-2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391179,617,226 - 79,617,337 (+)NCBIGRCm39mm39
GRCm39 Ensembl1179,617,226 - 79,617,337 (+)Ensembl
GRCm381179,726,400 - 79,726,511 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1179,726,400 - 79,726,511 (+)EnsemblGRCm38mm10GRCm38
MGSCv371179,539,902 - 79,540,013 (+)NCBIGRCm37mm9NCBIm37
Celera1189,359,011 - 89,359,122 (+)NCBICelera
Cytogenetic Map11B5NCBI
MIR365B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1731,575,411 - 31,575,521 (+)EnsemblGRCh38hg38GRCh38
GRCh381731,575,411 - 31,575,521 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371729,902,430 - 29,902,540 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361726,926,542 - 26,926,652 (+)NCBINCBI36hg18NCBI36
Celera1726,822,194 - 26,822,304 (+)NCBI
Cytogenetic Map17q11.2NCBI
HuRef1726,112,839 - 26,112,949 (+)NCBIHuRef
CHM1_11729,965,075 - 29,965,185 (+)NCBICHM1_1
Mir365b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21064,686,255 - 64,686,340 (+)NCBI
Rnor_6.0 Ensembl1067,079,796 - 67,079,881 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01067,079,796 - 67,079,881 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01064,570,072 - 64,570,157 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1063,655,085 - 63,655,170 (+)NCBICelera
Cytogenetic Map10q25NCBI
MIR365-2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl941,303,092 - 41,303,202 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1941,303,092 - 41,303,202 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
MIR365-2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1243,324,728 - 43,324,809 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11243,324,725 - 43,324,804 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21245,152,792 - 45,152,871 (-)NCBISscrofa10.2Sscrofa10.2susScr3


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170800372104800540Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170800372104800540Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170800372104800540Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170800372104800540Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172128823106128908Mouse
1301078Alcp2_malcohol preference locus 2 (mouse)Not determined117231897084840636Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172835299106835463Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172927789106927907Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172927789106927907Mouse
12903994Opfaq3_mopen field activity QTL 3 (mouse)117384671582178599Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177172953111173092Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177546357111546496Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177546357111546496Mouse
4141365Ltxs3_mlethal factor toxin susceptibility 3 (mouse)Not determined117768304780855532Mouse
1302124Eae7_msusceptibility to experimental allergic encephalomyelitis 7 (mouse)Not determined117768304799486994Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177880152111880273Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179265183107725646Mouse
14746970Manh71_mmandible shape 71 (mouse)1179525431113525431Mouse

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:21229
Count of gene targets:10096
Count of transcripts:16555
Interacting mature miRNAs:mmu-miR-365-2-5p, mmu-miR-365-3p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000083555
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1179,726,400 - 79,726,511 (+)Ensembl
RefSeq Acc Id: NR_029959
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391179,617,226 - 79,617,337 (+)NCBI
GRCm381179,726,400 - 79,726,511 (+)ENTREZGENE
MGSCv371179,539,902 - 79,540,013 (+)RGD
Celera1189,359,011 - 89,359,122 (+)RGD
cM Map11 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3619372 AgrOrtholog
Ensembl Genes ENSMUSG00000065489 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083555 ENTREZGENE
MGD MGI:3619372 ENTREZGENE
miRBase MI0001645 ENTREZGENE
NCBI Gene 723853 ENTREZGENE
PhenoGen Mir365-2 PhenoGen
RNAcentral URS00003E7283 RNACentral
  URS00005EEDFF RNACentral
  URS000075E271 RNACentral