Peli1 (pellino 1) - Rat Genome Database

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Gene: Peli1 (pellino 1) Mus musculus
Analyze
Symbol: Peli1
Name: pellino 1
RGD ID: 1322533
MGI Page MGI
Description: Enables ubiquitin protein ligase activity. Involved in negative regulation of necroptotic process. Acts upstream of or within several processes, including positive regulation of macromolecule metabolic process; positive regulation of signal transduction; and regulation of lymphocyte proliferation. Located in nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; sensory organ; and skin. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to human PELI1 (pellino E3 ubiquitin protein ligase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2810468L03Rik; A930031K15Rik; AA409794; AI586297; D11Ertd676; D11Ertd676e; E3 ubiquitin-protein ligase pellino homolog 1; pellino-1; protein pellino homolog 1; RING-type E3 ubiquitin transferase pellino homolog 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391121,041,283 - 21,100,327 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1121,041,291 - 21,100,323 (+)EnsemblGRCm39 Ensembl
GRCm381121,091,283 - 21,150,327 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1121,091,291 - 21,150,323 (+)EnsemblGRCm38mm10GRCm38
MGSCv371120,991,327 - 21,050,330 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361121,035,472 - 21,050,326 (+)NCBIMGSCv36mm8
Celera1123,239,549 - 23,298,574 (+)NCBICelera
Cytogenetic Map11A3.1NCBI
cM Map1113.81NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-sulfonyldiphenol  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
calciol  (EXP)
CGP 52608  (ISO)
choline  (EXP)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (EXP,ISO)
cytarabine  (ISO)
diarsenic trioxide  (ISO)
dichloromethane  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
ethylbenzene  (ISO)
flutamide  (ISO)
folic acid  (EXP)
gamma-hexachlorocyclohexane  (ISO)
gentamycin  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
lipopolysaccharide  (EXP,ISO)
methamphetamine  (EXP)
methapyrilene  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
monosodium L-glutamate  (EXP)
nickel atom  (ISO)
nickel sulfate  (ISO)
o-xylene  (ISO)
paracetamol  (EXP,ISO)
phenobarbital  (EXP)
phenol  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
propiconazole  (EXP)
pyrogallol  (EXP)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
sodium arsenate  (ISO)
Soman  (ISO)
sulfadimethoxine  (ISO)
sulforaphane  (ISO)
thioacetamide  (ISO)
toluene  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
vitamin E  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Interleukin-1 (IL-1) pathway. Weber A, etal., Sci Signal. 2010 Jan 19;3(105):cm1. doi: 10.1126/scisignal.3105cm1.
4. Immune-related genes STIM1, ITPKC and PELI1 polymorphisms are associated with risk of colorectal cancer. Zhu L, etal., Eur J Cancer Prev. 2021 Sep 1;30(5):357-363. doi: 10.1097/CEJ.0000000000000641.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11306823   PMID:12174196   PMID:12466851   PMID:12477932   PMID:12496252  
PMID:14610273   PMID:15489334   PMID:16107646   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18798549   PMID:18799693   PMID:19734906   PMID:20167875   PMID:21120624   PMID:21204785  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:21874024   PMID:22007846   PMID:22028030   PMID:22902624   PMID:23603814   PMID:23846693   PMID:24194600   PMID:24442869   PMID:25027698  
PMID:25295537   PMID:27257617   PMID:27377744   PMID:27481129   PMID:28177171   PMID:28410192   PMID:28746869   PMID:29078411   PMID:29523541   PMID:29555915   PMID:29883609   PMID:30190124  
PMID:30247157   PMID:30914375   PMID:30952868   PMID:31142803   PMID:31260751   PMID:31417543   PMID:31537781   PMID:31720043   PMID:32171293   PMID:32414810   PMID:32537701   PMID:32544190  
PMID:32873845   PMID:32968282   PMID:33017390   PMID:33052227   PMID:33215753   PMID:33707688   PMID:34321999   PMID:34504806   PMID:34706239   PMID:35058288   PMID:35310934   PMID:35805095  
PMID:36179399   PMID:36216205   PMID:36520055   PMID:36646143   PMID:36822176   PMID:37039145   PMID:37296648   PMID:37778482   PMID:38346961  


Genomics

Comparative Map Data
Peli1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391121,041,283 - 21,100,327 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1121,041,291 - 21,100,323 (+)EnsemblGRCm39 Ensembl
GRCm381121,091,283 - 21,150,327 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1121,091,291 - 21,150,323 (+)EnsemblGRCm38mm10GRCm38
MGSCv371120,991,327 - 21,050,330 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361121,035,472 - 21,050,326 (+)NCBIMGSCv36mm8
Celera1123,239,549 - 23,298,574 (+)NCBICelera
Cytogenetic Map11A3.1NCBI
cM Map1113.81NCBI
PELI1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38264,092,652 - 64,144,420 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl264,092,652 - 64,144,420 (-)EnsemblGRCh38hg38GRCh38
GRCh37264,319,786 - 64,371,554 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36264,173,499 - 64,192,987 (-)NCBINCBI36Build 36hg18NCBI36
Build 34264,231,645 - 64,251,134NCBI
Celera264,165,044 - 64,216,871 (-)NCBICelera
Cytogenetic Map2p14NCBI
HuRef264,059,563 - 64,111,396 (-)NCBIHuRef
CHM1_1264,250,026 - 64,301,844 (-)NCBICHM1_1
T2T-CHM13v2.0264,100,282 - 64,152,062 (-)NCBIT2T-CHM13v2.0
Peli1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81499,455,970 - 99,510,474 (+)NCBIGRCr8
mRatBN7.21495,254,274 - 95,309,168 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1495,254,589 - 95,308,285 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1499,600,859 - 99,654,628 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.014100,841,202 - 100,894,967 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01497,314,719 - 97,368,484 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.014106,008,086 - 106,062,566 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14106,008,086 - 106,061,641 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014106,075,061 - 106,128,271 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414101,870,272 - 101,924,228 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.114101,920,929 - 101,943,454 (+)NCBI
Celera1494,267,696 - 94,321,536 (+)NCBICelera
Cytogenetic Map14q22NCBI
Peli1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542420,211,600 - 20,263,761 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542420,212,077 - 20,263,761 (+)NCBIChiLan1.0ChiLan1.0
PELI1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21262,250,630 - 62,306,758 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A62,257,658 - 62,310,709 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A64,160,362 - 64,213,200 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A65,284,472 - 65,336,335 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A65,284,480 - 65,336,339 (-)Ensemblpanpan1.1panPan2
PELI1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11063,727,905 - 63,863,599 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1063,729,604 - 63,743,303 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1063,616,694 - 63,752,371 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01064,736,541 - 64,872,342 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1064,736,553 - 64,795,619 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11064,418,361 - 64,554,038 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01064,727,691 - 64,863,369 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01065,019,832 - 65,155,570 (-)NCBIUU_Cfam_GSD_1.0
Peli1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629219,530,464 - 19,586,021 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364918,985,074 - 9,041,244 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364918,985,074 - 9,040,863 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PELI1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl377,713,489 - 77,796,914 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1377,740,460 - 77,796,911 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PELI1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11442,864,857 - 42,930,315 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1442,864,897 - 42,930,394 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604568,937,787 - 69,003,497 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Peli1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247629,328,109 - 9,386,067 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247629,328,275 - 9,382,996 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Peli1
1994 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1185
Count of miRNA genes:450
Interacting mature miRNAs:537
Transcripts:ENSMUST00000093290, ENSMUST00000101477, ENSMUST00000149675, ENSMUST00000156122
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
10412216Eae44_mexperimental allergic encephalomyelitis susceptibility 44 (mouse)Not determined111226863739950840Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
13524844Ppiq9_mprepulse inhibition QTL 9 (mouse)11904999735077325Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11688027733916219Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111095123244951464Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11450789621379532Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11125976374Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111095123244951464Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11901178043011942Mouse

Markers in Region
RH124889  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381121,150,065 - 21,150,217UniSTSGRCm38
MGSCv371121,050,068 - 21,050,220UniSTSGRCm37
Celera1123,298,312 - 23,298,464UniSTS
Cytogenetic Map11A3.2UniSTS
AI586297  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381121,148,966 - 21,149,045UniSTSGRCm38
MGSCv371121,048,969 - 21,049,048UniSTSGRCm37
Celera1123,297,213 - 23,297,292UniSTS
Cytogenetic Map11A3.2UniSTS
Whitehead/MRC_RH11383.2UniSTS
D11Ertd676e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381121,149,123 - 21,149,322UniSTSGRCm38
MGSCv371121,049,126 - 21,049,325UniSTSGRCm37
Celera1123,297,370 - 23,297,569UniSTS
Cytogenetic Map11A3.2UniSTS
cM Map1111.0UniSTS
cM Map1113.5UniSTS
RH141447  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381121,150,068 - 21,150,256UniSTSGRCm38
MGSCv371121,050,071 - 21,050,259UniSTSGRCm37
Celera1123,298,315 - 23,298,503UniSTS
Cytogenetic Map11A3.2UniSTS
Peli1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381121,150,066 - 21,150,230UniSTSGRCm38
MGSCv371121,050,069 - 21,050,233UniSTSGRCm37
Celera1123,298,313 - 23,298,477UniSTS
Cytogenetic Map11A3.2UniSTS
cM Map1113.5UniSTS
Peli1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381121,148,869 - 21,149,008UniSTSGRCm38
MGSCv371121,048,872 - 21,049,011UniSTSGRCm37
Celera1123,297,116 - 23,297,255UniSTS
Cytogenetic Map11A3.2UniSTS
cM Map1113.5UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_023324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011243746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC091421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF302503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL669979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW124934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000093290   ⟹   ENSMUSP00000090979
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1121,041,291 - 21,100,323 (+)Ensembl
GRCm38.p6 Ensembl1121,091,291 - 21,150,323 (+)Ensembl
RefSeq Acc Id: ENSMUST00000101477   ⟹   ENSMUSP00000099018
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1121,085,469 - 21,100,323 (+)Ensembl
GRCm38.p6 Ensembl1121,135,469 - 21,150,323 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149675
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1121,042,118 - 21,099,402 (+)Ensembl
GRCm38.p6 Ensembl1121,092,118 - 21,149,402 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156122
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1121,041,291 - 21,093,005 (+)Ensembl
GRCm38.p6 Ensembl1121,091,291 - 21,143,005 (+)Ensembl
RefSeq Acc Id: NM_023324   ⟹   NP_075813
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391121,041,324 - 21,100,327 (+)NCBI
GRCm381121,091,324 - 21,150,327 (+)ENTREZGENE
MGSCv371120,991,327 - 21,050,330 (+)RGD
Celera1123,239,549 - 23,298,574 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011243746   ⟹   XP_011242048
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391121,041,283 - 21,100,327 (+)NCBI
GRCm381121,091,283 - 21,150,327 (+)NCBI
Sequence:
RefSeq Acc Id: NP_075813   ⟸   NM_023324
- UniProtKB: Q9CV22 (UniProtKB/Swiss-Prot),   Q91YL9 (UniProtKB/Swiss-Prot),   Q9ERJ8 (UniProtKB/Swiss-Prot),   Q8C669 (UniProtKB/Swiss-Prot),   Q5SRW7 (UniProtKB/TrEMBL),   Q3TJA0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011242048   ⟸   XM_011243746
- Peptide Label: isoform X1
- UniProtKB: Q3TJA0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000090979   ⟸   ENSMUST00000093290
RefSeq Acc Id: ENSMUSP00000099018   ⟸   ENSMUST00000101477
Protein Domains
FHA   Pellino FHA   Pellino RING

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8C669-F1-model_v2 AlphaFold Q8C669 1-418 view protein structure

Promoters
RGD ID:6821516
Promoter ID:MM_KWN:6588
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000011680,   OTTMUST00000011682,   OTTMUST00000011683
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361120,991,139 - 20,991,639 (+)MPROMDB
RGD ID:6821517
Promoter ID:MM_KWN:6590
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:UC007IDN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361121,035,071 - 21,035,822 (+)MPROMDB
RGD ID:8674064
Promoter ID:EPDNEW_M15063
Type:multiple initiation site
Name:Peli1_1
Description:Mus musculus pellino 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381121,091,324 - 21,091,384EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914495 AgrOrtholog
Ensembl Genes ENSMUSG00000020134 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000093290 ENTREZGENE
  ENSMUST00000093290.12 UniProtKB/Swiss-Prot
  ENSMUST00000101477.2 UniProtKB/Swiss-Prot
InterPro Pellino_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pellino_FHA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pellino_RING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1914495 ENTREZGENE
NCBI Gene 67245 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE PELLINO HOMOLOG 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12098 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pellino UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pellino_RING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Peli1 PhenoGen
PIRSF Pellino UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt PELI1_MOUSE UniProtKB/Swiss-Prot
  Q3TJA0 ENTREZGENE, UniProtKB/TrEMBL
  Q5SRW7 ENTREZGENE, UniProtKB/TrEMBL
  Q8C669 ENTREZGENE
  Q91YL9 ENTREZGENE
  Q9CV22 ENTREZGENE
  Q9ERJ8 ENTREZGENE
UniProt Secondary Q91YL9 UniProtKB/Swiss-Prot
  Q9CV22 UniProtKB/Swiss-Prot
  Q9ERJ8 UniProtKB/Swiss-Prot