Fzr1 (fizzy and cell division cycle 20 related 1) - Rat Genome Database

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Gene: Fzr1 (fizzy and cell division cycle 20 related 1) Mus musculus
Analyze
Symbol: Fzr1
Name: fizzy and cell division cycle 20 related 1
RGD ID: 1318647
MGI Page MGI
Description: Predicted to enable anaphase-promoting complex binding activity and ubiquitin ligase activator activity. Involved in negative regulation of cell aging and positive regulation of cell population proliferation. Acts upstream of or within lens fiber cell differentiation; proteolysis involved in cellular protein catabolic process; and regulation of meiotic nuclear division. Predicted to be located in nuclear membrane and nucleoplasm. Predicted to be part of anaphase-promoting complex. Is expressed in several structures, including central nervous system; liver; oocyte; sensory organ; and skeleton. Orthologous to human FZR1 (fizzy and cell division cycle 20 related 1); PARTICIPATES IN cell cycle pathway, mitotic; ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AW108046; Cdh1; cdh1/Hct1 homolog; cell division cycle 20 related 1; fizzy-related protein homolog; fizzy/cell division cycle 20 related 1; fizzy/cell division cycle 20 related 1 (Drosophila); Fy; Fyr; FZR; FZR2; HCDH; HCDH1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
NCBI Annotation Information: Note: CDH1 (GeneID 12550) and FZR1 (GeneID 56371) share the CDH1 symbol. CDH1 is sometimes used as an abbreviation for 'CDC20 homolog 1' which is an alternate name for the FZR1 gene and thus can be confused with the official symbol for cadherin 1 (CDH1). [16 Jul 2018]
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391081,202,713 - 81,214,204 (-)NCBIGRCm39mm39
GRCm39 Ensembl1081,202,056 - 81,214,350 (-)Ensembl
GRCm381081,366,879 - 81,378,370 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1081,366,222 - 81,378,516 (-)EnsemblGRCm38mm10GRCm38
MGSCv371080,829,624 - 80,841,115 (-)NCBIGRCm37mm9NCBIm37
MGSCv361080,770,008 - 80,781,499 (-)NCBImm8
Celera1082,387,912 - 82,399,403 (-)NCBICelera
Cytogenetic Map10C1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10606752   PMID:10891459   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11179223   PMID:11217851   PMID:12477932   PMID:12520002   PMID:12655059  
PMID:12797865   PMID:12904583   PMID:14610273   PMID:14716021   PMID:15029244   PMID:15489334   PMID:15561765   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16148219   PMID:16456547  
PMID:17001306   PMID:17190794   PMID:17215516   PMID:17325031   PMID:17601983   PMID:17967808   PMID:18552834   PMID:18799693   PMID:19129509   PMID:19160489   PMID:19861496   PMID:20223764  
PMID:20530197   PMID:21186356   PMID:21241890   PMID:21255192   PMID:21267068   PMID:21270054   PMID:21460039   PMID:21497201   PMID:21628590   PMID:21873635   PMID:22014574   PMID:22152476  
PMID:22654103   PMID:22918942   PMID:22949615   PMID:23077180   PMID:23097041   PMID:23206702   PMID:23238556   PMID:23242419   PMID:23541922   PMID:23696789   PMID:24194600   PMID:24301314  
PMID:24301385   PMID:24553289   PMID:24637522   PMID:25789873   PMID:25843713   PMID:25913861   PMID:26228240   PMID:26731471   PMID:27126000   PMID:28143883   PMID:28174173   PMID:28322826  
PMID:28396402   PMID:28502659   PMID:28505105   PMID:28604711   PMID:28604743   PMID:31420536   PMID:32152291   PMID:32325033   PMID:32328643   PMID:32434143   PMID:32978372  


Genomics

Comparative Map Data
Fzr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391081,202,713 - 81,214,204 (-)NCBIGRCm39mm39
GRCm39 Ensembl1081,202,056 - 81,214,350 (-)Ensembl
GRCm381081,366,879 - 81,378,370 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1081,366,222 - 81,378,516 (-)EnsemblGRCm38mm10GRCm38
MGSCv371080,829,624 - 80,841,115 (-)NCBIGRCm37mm9NCBIm37
MGSCv361080,770,008 - 80,781,499 (-)NCBImm8
Celera1082,387,912 - 82,399,403 (-)NCBICelera
Cytogenetic Map10C1NCBI
FZR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl193,506,311 - 3,538,334 (+)EnsemblGRCh38hg38GRCh38
GRCh38193,506,263 - 3,538,334 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37193,506,309 - 3,538,332 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36193,473,954 - 3,489,325 (+)NCBINCBI36hg18NCBI36
Build 34193,473,953 - 3,489,325NCBI
Celera193,443,104 - 3,473,565 (+)NCBI
Cytogenetic Map19p13.3NCBI
HuRef193,272,276 - 3,302,307 (+)NCBIHuRef
CHM1_1193,505,941 - 3,536,425 (+)NCBICHM1_1
Fzr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.278,332,029 - 8,343,953 (+)NCBI
Rnor_6.0 Ensembl711,201,690 - 11,213,613 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0711,201,690 - 11,213,614 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0711,368,581 - 11,380,505 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.479,816,491 - 9,829,006 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.179,816,497 - 9,829,003 (+)NCBI
Celera76,521,094 - 6,533,016 (+)NCBICelera
Cytogenetic Map7q11NCBI
Fzr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554955,481,916 - 5,505,521 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554955,481,914 - 5,503,690 (+)NCBIChiLan1.0ChiLan1.0
FZR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1193,483,601 - 3,512,798 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl193,500,117 - 3,510,867 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0192,533,172 - 2,564,301 (+)NCBIMhudiblu_PPA_v0panPan3
FZR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12055,866,893 - 55,877,077 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2055,869,693 - 55,876,936 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2055,591,521 - 55,613,508 (-)NCBI
ROS_Cfam_1.02056,526,317 - 56,548,298 (-)NCBI
UMICH_Zoey_3.12055,581,995 - 55,603,964 (-)NCBI
UNSW_CanFamBas_1.02056,065,400 - 56,087,328 (-)NCBI
UU_Cfam_GSD_1.02056,264,144 - 56,286,128 (-)NCBI
Fzr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118215,827,214 - 215,833,762 (-)NCBI
SpeTri2.0NW_0049365882,000,872 - 2,007,569 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FZR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl275,118,832 - 75,146,837 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1275,122,599 - 75,164,134 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2275,783,163 - 75,789,212 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FZR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.163,272,247 - 3,300,370 (+)NCBI
ChlSab1.1 Ensembl63,288,407 - 3,298,464 (+)Ensembl
Vero_WHO_p1.0NW_0236660815,191,962 - 5,219,993 (-)NCBI
Fzr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248286,236,861 - 6,254,763 (+)NCBI

Position Markers
Fzr1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381081,369,373 - 81,370,004UniSTSGRCm38
MGSCv371080,832,118 - 80,832,749UniSTSGRCm37
Celera1082,390,406 - 82,391,037UniSTS
Cytogenetic Map10C1UniSTS
cM Map10 UniSTS
AW108046  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381081,367,274 - 81,367,384UniSTSGRCm38
MGSCv371080,830,019 - 80,830,129UniSTSGRCm37
Celera1082,388,307 - 82,388,417UniSTS
Cytogenetic Map10C1UniSTS
Whitehead/MRC_RH13610.41UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301737Insq9_minsulin QTL 9 (mouse)Not determined106565510499655287Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105125566085255809Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined105001244384012618Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021532255114381325Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104950223383502378Mouse
1302035Lmb4_mlupus in MRL and B6 F2 cross (mouse)Not determined106701240892422811Mouse
1302060El3_mepilepsy 3 (mouse)Not determined106565510499655287Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018383585125739363Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105868113592681262Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105125566085255809Mouse
1357632Vtbt9_mvertebral trabecular bone trait 9 (mouse)Not determined1075502706109502905Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101282830784243920Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined105001240884012633Mouse
1300533Aem3_manti-erythrocyte autoantibody modifier 3 (mouse)Not determined106565510499655287Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105161730482655287Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101023252187565233Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined105001244384012618Mouse
1357740Obsty3_mobesity 3 (mouse)Not determined108359714116355075Mouse
1357893Lvrq4_mliver weight QTL 4 (mouse)Not determined101282830784243920Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101282830784243920Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101282830784243920Mouse
1300975Fembrs3_mfemur breaking strength 3 (mouse)Not determined1075502706109502905Mouse
4142107Obrq12_mobesity resistance QTL 12 (mouse)Not determined7415138482655287Mouse
4142137Femwf3_mfemur work to failure 3 (mouse)Not determined75502706109502905Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined105001240884012633Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1282830784243920Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4684430782655287Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1282830784243920Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined105001240884012633Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1282830784243920Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1282830784243920Mouse
11039497Ltpr5a_mLeishmania tropica response 5a (mouse)1073671039107671185Mouse
14746991Manh68_mmandible shape 68 (mouse)105244466786444667Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024800000121200000Mouse
13208560Wght9_mweight 9 (mouse)1060000000121000000Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101282830784243920Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1074151384125680038Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045600000120800000Mouse
26884447Sklq9_mskull length QTL 9, 10 week (mouse)1067500000111900000Mouse
26884424Zlq9_mzygomatic length QTL 9, 16 week (mouse)1064100000116100000Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102300000091200000Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1019000000129800000Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1045000000116100000Mouse
11251717Siim1_mstress induced immobility 1 (mouse)1078545406112545406Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039300000129800000Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059500000122500000Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1074151384125680038Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069900000132500000Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039300000129800000Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1068000000125000000Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir10bmmu-miR-10b-5pOncomiRDBexternal_infoNANA22847191
Mir23ammu-miR-23a-3pOncomiRDBexternal_infoNANA22752005
Mir495mmu-miR-495-3pOncomiRDBexternal_infoNANA21258409
Mir92-1mmu-miR-92a-3pOncomiRDBexternal_infoNANA21148309
Mir9-3mmu-miR-9-5pOncomiRDBexternal_infoNANA20173740
Mir92-2mmu-miR-92a-3pOncomiRDBexternal_infoNANA21148309
Mir25mmu-miR-25-3pOncomiRDBexternal_infoNANA22450326

Predicted Target Of
Summary Value
Count of predictions:1694
Count of miRNA genes:655
Interacting mature miRNAs:813
Transcripts:ENSMUST00000020457, ENSMUST00000118812, ENSMUST00000127203, ENSMUST00000138343, ENSMUST00000140901, ENSMUST00000150824
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_019757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC155937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF083809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ786633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000020457   ⟹   ENSMUSP00000020457
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1081,367,098 - 81,378,451 (-)Ensembl
RefSeq Acc Id: ENSMUST00000118812   ⟹   ENSMUSP00000112868
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1081,367,509 - 81,371,413 (-)Ensembl
RefSeq Acc Id: ENSMUST00000127203
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1081,375,363 - 81,378,380 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138343
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1081,367,372 - 81,378,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140901   ⟹   ENSMUSP00000114203
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1081,366,222 - 81,378,516 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150824
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1081,368,276 - 81,369,541 (-)Ensembl
RefSeq Acc Id: NM_019757   ⟹   NP_062731
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391081,202,713 - 81,214,204 (-)NCBI
GRCm381081,366,879 - 81,378,370 (-)ENTREZGENE
MGSCv371080,829,624 - 80,841,115 (-)RGD
Celera1082,387,912 - 82,399,403 (-)RGD
cM Map10 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_062731   ⟸   NM_019757
- UniProtKB: Q9R1K5 (UniProtKB/Swiss-Prot),   Q3U3D4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000112868   ⟸   ENSMUST00000118812
RefSeq Acc Id: ENSMUSP00000020457   ⟸   ENSMUST00000020457
RefSeq Acc Id: ENSMUSP00000114203   ⟸   ENSMUST00000140901
Protein Domains
WD_REPEATS_REGION

Promoters
RGD ID:6819304
Promoter ID:MM_KWN:4988
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Spleen
Transcripts:OTTMUST00000075269
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,832,066 - 80,833,127 (-)MPROMDB
RGD ID:6819302
Promoter ID:MM_KWN:4989
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell
Transcripts:ENSMUST00000118812
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,833,796 - 80,835,037 (-)MPROMDB
RGD ID:6819303
Promoter ID:MM_KWN:4990
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:OTTMUST00000075264,   OTTMUST00000075265,   OTTMUST00000075266,   OTTMUST00000075268
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361080,841,041 - 80,841,857 (-)MPROMDB
RGD ID:8672802
Promoter ID:EPDNEW_M14432
Type:initiation region
Name:Fzr1_1
Description:Mus musculus fizzy and cell division cycle 20 related 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381081,378,422 - 81,378,482EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926790 AgrOrtholog
Ensembl Genes ENSMUSG00000020235 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000020457 UniProtKB/TrEMBL
  ENSMUSP00000112868 UniProtKB/TrEMBL
  ENSMUSP00000114203 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000020457 UniProtKB/TrEMBL
  ENSMUST00000118812 UniProtKB/TrEMBL
  ENSMUST00000140901 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Apc4_WD40_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cdc20/Fizzy UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1926790 ENTREZGENE
NCBI Gene 56371 ENTREZGENE
PANTHER PTHR19918 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ANAPC4_WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fzr1 PhenoGen
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt C0LZ42_MOUSE UniProtKB/TrEMBL
  D3YTV2_MOUSE UniProtKB/TrEMBL
  F8WJ80_MOUSE UniProtKB/TrEMBL
  FZR1_MOUSE UniProtKB/Swiss-Prot
  Q3TQ38_MOUSE UniProtKB/TrEMBL
  Q3U2B8_MOUSE UniProtKB/TrEMBL
  Q3U3D4 ENTREZGENE, UniProtKB/TrEMBL
  Q9R1K5 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-31 Fzr1  fizzy and cell division cycle 20 related 1    fizzy/cell division cycle 20 related 1 (Drosophila)  Symbol and/or name change 5135510 APPROVED