Nanos3 (nanos C2HC-type zinc finger 3)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| FTP Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: Nanos3 (nanos C2HC-type zinc finger 3) Mus musculus

Analyze

Symbol:

Nanos3

Name:

nanos C2HC-type zinc finger 3

RGD ID:

1315422

MGI Page

MGI

Description:

Exhibits RNA binding activity. Involved in several processes, including gamete generation; negative regulation of apoptotic signaling pathway; and regulation of translation. Localizes to P-body; cytoplasmic stress granule; and nucleus. Is expressed in telencephalon and testis. Orthologous to human NANOS3 (nanos C2HC-type zinc finger 3); INTERACTS WITH 4,4'-diaminodiphenylmethane; busulfan; cypermethrin.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

MGC141148; n; nanos homolog 3; nanos homolog 3 (Drosophila); NOS-3; nos3

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NANOS3 (nanos C2HC-type zinc finger 3)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Nanos3 (nanos C2HC-type zinc finger 3)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Nanos3 (nanos C2HC-type zinc finger 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NANOS3 (nanos C2HC-type zinc finger 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nanos3 (nanos C2HC-type zinc finger 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	NANOS3 (nanos C2HC-type zinc finger 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nanos3 (nanos C2HC-type zinc finger 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Nanos3 (nanos C2HC-type zinc finger 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	NANOS3 (nanos C2HC-type zinc finger 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	nanos3 (nanos homolog 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam\|ZFIN)
Caenorhabditis elegans (roundworm):	nos-1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB\|TreeFam)
Drosophila melanogaster (fruit fly):	nos	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|TreeFam)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	84,900,359 - 84,911,396 (-)	NCBI	GRCm39		mm39
GRCm38	8	84,173,733 - 84,176,552 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	84,173,731 - 84,185,217 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	86,697,632 - 86,700,451 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	87,063,838 - 87,066,657 (-)	NCBI			mm8
Celera	8	88,474,167 - 88,476,986 (-)	NCBI		Celera
Cytogenetic Map	8	C2	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-diaminodiphenylmethane (EXP)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

bisphenol A (ISO)

busulfan (EXP)

cypermethrin (EXP)

folic acid (EXP)

glyphosate (EXP)

paracetamol (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (IEA)

germ cell development (ISO)

multicellular organism development (IEA)

negative regulation of apoptotic signaling pathway (IGI,IMP)

negative regulation of translation (IBA,ISO)

oogenesis (IBA,IMP)

positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ISO)

regulation of cell cycle (IDA)

regulation of translation (IEA,IEP)

spermatogenesis (IDA,IMP)

Cellular Component

cytoplasm (IDA,ISO)

cytoplasmic stress granule (IDA)

nucleus (IDA,ISO)

P-body (IDA)

perinuclear region of cytoplasm (IBA,ISO)

Molecular Function

metal ion binding (IEA)

mRNA binding (IBA)

protein binding (IPI)

RNA binding (IDA)

zinc ion binding (IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal female germ cell morphology (IAGP)

abnormal female meiosis (IAGP)

abnormal seminiferous tubule morphology (IAGP)

abnormal spermatogonia morphology (IAGP)

absent germ cells (IAGP)

azoospermia (IAGP)

decreased primordial germ cell number (IAGP)

decreased testis weight (IAGP)

female infertility (IAGP)

immotile sperm (IAGP)

male infertility (IAGP)

small gonad (IAGP)

small ovary (IAGP)

References

References - curated


1.	MGD data from the GO Consortium
2.	MGD IEA
3.	RGD automated import pipeline
4.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:12947200	PMID:14610273	PMID:14962849	PMID:17062627	PMID:17138666	PMID:17567665	PMID:17967808	PMID:18089289	PMID:18281459	PMID:18436203	PMID:18799693
PMID:19745153	PMID:19818747	PMID:19861488	PMID:20174582	PMID:20707993	PMID:21115610	PMID:21267068	PMID:21421998	PMID:21775990	PMID:21873635	PMID:22037762	PMID:24091668
PMID:24850856	PMID:25359900	PMID:25416063	PMID:25810472	PMID:26120033	PMID:26609159	PMID:27353389	PMID:28115634	PMID:28196692	PMID:28585553	PMID:29339164	PMID:32339196

Genomics

Comparative Map Data

Nanos3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	84,900,359 - 84,911,396 (-)	NCBI	GRCm39		mm39
GRCm38	8	84,173,733 - 84,176,552 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	84,173,731 - 84,185,217 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	86,697,632 - 86,700,451 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	8	87,063,838 - 87,066,657 (-)	NCBI			mm8
Celera	8	88,474,167 - 88,476,986 (-)	NCBI		Celera
Cytogenetic Map	8	C2	NCBI

NANOS3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	13,862,063 - 13,880,757 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	13,862,036 - 13,880,757 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	13,988,063 - 13,991,571 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	13,848,950 - 13,852,571 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	19	13,881,695 - 13,885,316 (+)	NCBI
Cytogenetic Map	19	p13.12	NCBI
HuRef	19	13,559,374 - 13,562,880 (+)	NCBI		HuRef
CHM1_1	19	13,988,759 - 13,992,267 (+)	NCBI		CHM1_1

Nanos3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	19	25,284,907 - 25,288,680 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	25,284,909 - 25,288,335 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	36,262,007 - 36,265,766 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	25,669,353 - 25,672,779 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	19	25,674,180 - 25,677,606 (+)	NCBI
Celera	19	23,534,011 - 23,537,437 (+)	NCBI		Celera
Cytogenetic Map	19	q11	NCBI

Nanos3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	32,649,054 - 32,651,936 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	32,648,455 - 32,651,909 (+)	NCBI	ChiLan1.0	ChiLan1.0

NANOS3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	14,170,500 - 14,173,267 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	14,170,699 - 14,173,013 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	13,427,661 - 13,443,218 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

Nanos3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936659	2,590,291 - 2,593,482 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NANOS3
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1 Ensembl	6	12,538,133 - 12,541,816 (+)	Ensembl
ChlSab1.1	6	12,537,449 - 12,541,660 (+)	NCBI

Nanos3
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624901	1,167,052 - 1,171,915 (+)	NCBI

Position Markers

Nanos3

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	8	C3	UniSTS
cM Map	8		UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32016544	117238700	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	34642776	114837007	Mouse
1301013	Capsq4_m	capsaicin sensitivity related QTL 4 (mouse)			Not determined		8	36163000	92728652	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37400000	109600000	Mouse
12904744	Carcdq1_m	cardiac collagen deposition QTL 1 (mouse)					8	39709256	94689598	Mouse
14700686	Civq3_m	cerebral infarct volume QTL 3 (mouse)					8	51882191	85882191	Mouse
1301506	Aevm1_m	autoimmune extremity vasculitis in MRL mice 1 (mouse)			Not determined		8	54287817	88287993	Mouse
1301952	Im3_m	immunoregulatory 3 (mouse)			Not determined		8	54706614	88706763	Mouse
10412287	Carg3_m	Candida albicans resistance gene 3 (mouse)			Not determined		8	55545028	89545028	Mouse
11353828	Gf7_m	gonadal fat pad weight 7 (mouse)					8	58201479	92201479	Mouse
10043975	Obq31_m	obesity QTL 31 (mouse)			Not determined		8	58409776	92409776	Mouse
1301688	Orch6_m	autoimmune orchitis resistance 6 (mouse)			Not determined		8	60786850	94786976	Mouse
4141285	Tgq18_m	triglyceride QTL 18 (mouse)			Not determined			63460107	97460107	Mouse
4141797	Skmw16_m	skeletal muscle weight 16 (mouse)			Not determined		8	63939547	97939696	Mouse
1357787	Vtbt5_m	vertebral trabecular bone trait 5 (mouse)			Not determined		8	65357768	99357920	Mouse
10043992	Hbnr11_m	Heligmosomoides bakeri nematode resistance 11 (mouse)			Not determined		8	65600207	99600347	Mouse
1301767	Fcsa2_m	femoral cross-sectional area 2 (mouse)			Not determined		8	70305375	104305495	Mouse
4142283	Imraq2_m	immune response to AAV2 QTL 2 (mouse)			Not determined		8	70305375	104305495	Mouse
1558780	Idd22_m	insulin dependent diabetes susceptibility 22 (mouse)			Not determined		8	71102903	105103009	Mouse
4141395	Char2a_m	P. chabaudi malaria resistance QTL 2a (mouse)			Not determined			71136783	90202598	Mouse
4142023	W3q5_m	weight 3 weeks QTL 5 (mouse)			Not determined			71287817	123895615	Mouse
1357708	Orq1_m	ovulation rate QTL 1 (mouse)			Not determined		8	71287817	123895615	Mouse
1301872	Cd4ts3_m	CD4 T cell subset 3 (mouse)			Not determined		8	71396181	105396393	Mouse
1300920	Pitm3_m	prion incubation time 3 (mouse)			Not determined		8	73202495	107202598	Mouse
27095912	Pglq14_m	pelvic girdle length QTL 14, 16 week (mouse)					8	73400000	126100000	Mouse
1558890	Lith18_m	lithogenic gene 18 (mouse)			Not determined		8	75675517	109675623	Mouse
1357470	Obq16_m	obesity QTL 16 (mouse)			Not determined		8	75685348	109685497	Mouse
1301808	Nhdlq1_m	non-HDL QTL 1 (mouse)			Not determined		8	75685348	109685497	Mouse
1301874	Hdlq16_m	HDL QTL 16 (mouse)			Not determined		8	75685348	109685497	Mouse
10412234	Nhdlq14_m	non-HDL QTL 14 (mouse)			Not determined		8	75685348	109685497	Mouse
1301099	Cbm2_m	cerebellum weight 2 (mouse)			Not determined		8	78518613	112518703	Mouse
1301581	Char2_m	P. chabaudi malaria resistance QTL 2 (mouse)			Not determined		8	79082178	113082403	Mouse
12904012	Cfq10_m	conditioned fear QTL 10 (mouse)					8	80066775	89014359	Mouse
10755530	Wbc2_m	white blood cell count 2 (mouse)					8	81092664	115092664	Mouse
10755519	Wbc1_m	white blood cell count 1 (mouse)					8	81619151	115619151	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	132
Count of miRNA genes:	122
Interacting mature miRNAs:	129
Transcripts:	ENSMUST00000070102
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001357361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_194059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036154034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036154035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB095973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC159266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC119513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC119514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000070102 ⟹ ENSMUSP00000067385

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	84,173,733 - 84,176,552 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000210202 ⟹ ENSMUSP00000147775

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	84,173,759 - 84,176,552 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000211482

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	8	84,173,731 - 84,185,217 (-)	Ensembl

RefSeq Acc Id:

NM_001357361 ⟹ NP_001344290

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	84,900,388 - 84,903,181 (-)	NCBI
GRCm38	8	84,173,759 - 84,176,552 (-)	NCBI

Sequence:

show sequence

TCTCTGCTCCTCTGCCCAGCCATGGGGACTTTCAATCTTTGGACAGATTACCTAGGTCTGGCAA
GACTGGTTGGGGCTCTGCATAAGGAAGAGGAGCTTGATGTAAGGCTGGATCCCAAACCAGAGCC
CAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGT
TCATTCTGCAAACACAATGGCGAGTCCCGTGCCATCTATCAGTCCCATGTCCTGAAGGATGAGG
CAGGGCGGGTGCTGTGTCCCATTTTGCGGGATTATGTGTGTCCCCAGTGTGGGGCCACTCAGGA
GCATGCCCACACTCGACGCTTTTGCCCACTCACCAGCCAGGGCTACACTTCTGTCTACTGCTAC
ACCACCCGGAATTCTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGATGCTG
GCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTTCCAAAAGTGGCAGGAAGCCCCCTGGACCTTC
ACCCTCGGCCTGCTGTCCCTCCACTACGGCCTAGGAGCTTGGAGTGGGGAGGACCATGGTGGCA
TCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGC
CACAGTCTTGTCAGCGATCACCTTCCCCACCCCTACTTGTGGTGTTGCCTCA

hide sequence

RefSeq Acc Id:

NM_194059 ⟹ NP_918948

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	84,900,362 - 84,903,181 (-)	NCBI
GRCm38	8	84,173,733 - 84,176,552 (-)	NCBI
MGSCv37	8	86,697,632 - 86,700,451 (-)	RGD
Celera	8	88,474,167 - 88,476,986 (-)	RGD
cM Map	8		ENTREZGENE

Sequence:

show sequence

TCTCTGCTCCTCTGCCCAGCCATGGGGACTTTCAATCTTTGGACAGATTACCTAGGTCTGGCAA
GACTGGTTGGGGCTCTGCATAAGGAAGAGGAGCTTGATGTAAGGCTGGATCCCAAACCAGAGCC
CAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGT
TCATTCTGCAAACACAATGGCGAGTCCCGTGCCATCTATCAGTCCCATGTCCTGAAGGATGAGG
CAGGGCGGGTGCTGTGTCCCATTTTGCGGGATTATGTGTGTCCCCAGTGTGGGGCCACTCAGGA
GCATGCCCACACTCGACGCTTTTGCCCACTCACCAGCCAGGGCTACACTTCTGTCTACTGCTAC
ACCACCCGGAATTCTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGATGCTG
GCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTGTCTATGCAGGTTCCAAAAGTGGCAGGAAGCC
CCCTGGACCTTCACCCTCGGCCTGCTGTCCCTCCACTACGGCCTAGGAGCTTGGAGTGGGGAGG
ACCATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGG
ACTGAGGCTGGCCACAGTCTTGTCAGCGATCACCTTCCCCACCCCTACTTGTGGTGTTGCCTCA
ACATCCAATAAATGCTAAGGAGTGGA

hide sequence

RefSeq Acc Id:

XM_036154034 ⟹ XP_036009927

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	84,900,359 - 84,911,396 (-)	NCBI

RefSeq Acc Id:

XM_036154035 ⟹ XP_036009928

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	84,900,359 - 84,911,392 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001344290	(Get FASTA)	NCBI Sequence Viewer
	NP_918948	(Get FASTA)	NCBI Sequence Viewer
	XP_036009927	(Get FASTA)	NCBI Sequence Viewer
	XP_036009928	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI19514	(Get FASTA)	NCBI Sequence Viewer
	AAI19515	(Get FASTA)	NCBI Sequence Viewer
	BAC82558	(Get FASTA)	NCBI Sequence Viewer
	P60324	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_918948 ⟸ NM_194059
- Peptide Label:	isoform 1
- UniProtKB:	P60324 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGTFNLWTDYLGLARLVGALHKEEELDVRLDPKPEPKPSSESQQASKESSAAPERLCSFCKHNG ESRAIYQSHVLKDEAGRVLCPILRDYVCPQCGATQEHAHTRRFCPLTSQGYTSVYCYTTRNSAG KKLTRPDKAKTQDAGHRLGGEAAAGVYAGSKSGRKPPGPSPSACCPSTTA hide sequence

RefSeq Acc Id:	NP_001344290 ⟸ NM_001357361
- Peptide Label:	isoform 2

RefSeq Acc Id:

ENSMUSP00000067385 ⟸ ENSMUST00000070102

RefSeq Acc Id:

ENSMUSP00000147775 ⟸ ENSMUST00000210202

RefSeq Acc Id:	XP_036009927 ⟸ XM_036154034
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_036009928 ⟸ XM_036154035
- Peptide Label:	isoform X2

Protein Domains

Nanos-type

Promoters

RGD ID:

8667653

Promoter ID:

EPDNEW_M11858

Type:

initiation region

Name:

Nanos3_1

Description:

Mus musculus nanos C2HC-type zinc finger 3 , transcript variant1, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	84,176,554 - 84,176,614	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2675387	AgrOrtholog
Ensembl Genes	ENSMUSG00000056155	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000067385	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000147775	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000070102	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000210202	ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.680	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Nanos/Xcar2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Nanos_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_nanos-typ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:244551	UniProtKB/Swiss-Prot
MGD	MGI:2675387	ENTREZGENE
NCBI Gene	244551	ENTREZGENE
PANTHER	PTHR12887	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	zf-nanos	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Nanos3	PhenoGen
PROSITE	ZF_NANOS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene	Mm.216740	ENTREZGENE
UniProt	NANO3_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
	Q0VDU5_MOUSE	UniProtKB/TrEMBL
UniProt Secondary	Q0VDU6	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-10-31	Nanos3	nanos C2HC-type zinc finger 3		nanos homolog 3 (Drosophila)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)