Prr5l (proline rich 5 like) - Rat Genome Database

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Gene: Prr5l (proline rich 5 like) Mus musculus
Analyze
Symbol: Prr5l
Name: proline rich 5 like
RGD ID: 1320600
MGI Page MGI
Description: Predicted to enable ubiquitin protein ligase binding activity. Involved in TORC2 signaling and regulation of fibroblast migration. Acts upstream of or within positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction and positive regulation of protein phosphorylation. Located in mitochondrion. Is expressed in cranium; genitourinary system; jaw; and limb. Orthologous to human PRR5L (proline rich 5 like).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2600010E01Rik; 4833411O04Rik; Gm4347; predicted gene 4347; proline-rich protein 5-like; protein observed with Rictor-2; Protor-2; Protor2; RIKEN cDNA 4833411O04 gene; RP23-325I3.4
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392101,543,455 - 101,713,428 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2101,544,630 - 101,713,372 (-)EnsemblGRCm39 Ensembl
GRCm382101,713,110 - 101,883,052 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2101,714,285 - 101,883,027 (-)EnsemblGRCm38mm10GRCm38
MGSCv372101,554,442 - 101,679,137 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362101,517,087 - 101,598,456 (-)NCBIMGSCv36mm8
MGSCv362102,525,319 - 102,608,002 (-)NCBIMGSCv36mm8
Celera2102,939,329 - 103,063,664 (-)NCBICelera
Cytogenetic Map2E2NCBI
cM Map253.93NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prr5lMouseintellectual disability  ISOPRR5L (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 

1 to 20 of 99 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prr5lMouse1,1-dichloroethene increases expressionEXP 6480464vinylidene chloride results in increased expression of PRR5L mRNACTDPMID:26682919
Prr5lMouse1,2-dichloroethane increases expressionEXP 6480464ethylene dichloride results in increased expression of PRR5L mRNACTDPMID:28960355
Prr5lMouse17beta-estradiol increases expressionISOPRR5L (Homo sapiens)6480464Estradiol results in increased expression of PRR5L mRNACTDPMID:23019147
Prr5lMouse17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of PRR5L mRNACTDPMID:39298647
Prr5lMouse17beta-estradiol multiple interactionsISOPRR5L (Homo sapiens)6480464[Estradiol co-treated with TGFB1 protein] results in increased expression of PRR5L mRNACTDPMID:30165855
Prr5lMouse3,4-methylenedioxymethamphetamine increases expressionEXP 6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of PRR5L mRNACTDPMID:20188158
Prr5lMouse4,4'-sulfonyldiphenol decreases expressionEXP 6480464bisphenol S results in decreased expression of PRR5L mRNACTDPMID:39298647
Prr5lMouse4-hydroxyphenyl retinamide increases expressionEXP 6480464Fenretinide results in increased expression of PRR5L mRNACTDPMID:28973697
Prr5lMouse5-aza-2'-deoxycytidine affects expressionISOPRR5L (Homo sapiens)6480464Decitabine affects the expression of PRR5L mRNACTDPMID:23300844
Prr5lMouse6-propyl-2-thiouracil decreases expressionISOPrr5l (Rattus norvegicus)6480464Propylthiouracil results in decreased expression of PRR5L mRNACTDPMID:24780913 and PMID:25825206
Prr5lMouseacrolein multiple interactionsISOPRR5L (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased expression of and results in increased oxidation of PRR5L mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased expression of and results in increased oxidation of PRR5L mRNACTDPMID:32699268
Prr5lMouseaflatoxin B1 decreases methylationISOPRR5L (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of PRR5L geneCTDPMID:27153756
Prr5lMousealpha-pinene multiple interactionsISOPRR5L (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased expression of and results in increased oxidation of PRR5L mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased expression of and results in increased oxidation of PRR5L mRNACTDPMID:32699268
Prr5lMousearsane multiple interactionsISOPRR5L (Homo sapiens)6480464[sodium arsenate results in increased abundance of Arsenic] which results in increased expression of PRR5L mRNACTDPMID:32525701
Prr5lMousearsane affects methylationISOPRR5L (Homo sapiens)6480464Arsenic affects the methylation of PRR5L geneCTDPMID:25304211
Prr5lMousearsenic atom affects methylationISOPRR5L (Homo sapiens)6480464Arsenic affects the methylation of PRR5L geneCTDPMID:25304211
Prr5lMousearsenic atom multiple interactionsISOPRR5L (Homo sapiens)6480464[sodium arsenate results in increased abundance of Arsenic] which results in increased expression of PRR5L mRNACTDPMID:32525701
Prr5lMousebenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of PRR5L mRNACTDPMID:21569818
Prr5lMousebenzo[a]pyrene increases expressionISOPRR5L (Homo sapiens)6480464Benzo(a)pyrene results in increased expression of PRR5L mRNACTDPMID:32234424
Prr5lMousebenzo[a]pyrene affects methylationISOPRR5L (Homo sapiens)6480464Benzo(a)pyrene affects the methylation of PRR5L 5' UTRCTDPMID:27901495

1 to 20 of 99 rows

Biological Process
1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prr5lMousecellular response to oxidative stress involved_inISOUniProtKB:Q6MZQ02290270 GO_CentralGO_REF:0000119
Prr5lMousecellular response to oxidative stress involved_inISSUniProtKB:Q6MZQ02290270 UniProtGO_REF:0000024
Prr5lMousenegative regulation of protein phosphorylation involved_inISSUniProtKB:Q6MZQ02290270 UniProtGO_REF:0000024
Prr5lMousenegative regulation of protein phosphorylation involved_inISOUniProtKB:Q6MZQ02290270 GO_CentralGO_REF:0000119
Prr5lMousenegative regulation of signal transduction involved_inIEAUniProtKB-KW:KW-07342290270 UniProtGO_REF:0000043
Prr5lMousephosphatidylinositol 3-kinase/protein kinase B signal transduction acts_upstream_ofIGIMGI:19247142290270 PMID:21413931MGIPMID:21413931
Prr5lMousepositive regulation of intracellular protein transport involved_inISOUniProtKB:Q6MZQ02290270 GO_CentralGO_REF:0000119
Prr5lMousepositive regulation of intracellular protein transport involved_inISSUniProtKB:Q6MZQ02290270 UniProtGO_REF:0000024
Prr5lMousepositive regulation of mRNA catabolic process involved_inISSUniProtKB:Q6MZQ02290270 UniProtGO_REF:0000024
Prr5lMousepositive regulation of mRNA catabolic process involved_inISOUniProtKB:Q6MZQ02290270 GO_CentralGO_REF:0000119
Prr5lMousepositive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction acts_upstream_of_or_withinIGIMGI:19247142290270 PMID:21413931MGIPMID:21413931
Prr5lMousepositive regulation of protein phosphorylation acts_upstream_of_or_withinIGIMGI:19247142290270 PMID:21413931MGIPMID:21413931
Prr5lMouseprotein phosphorylation acts_upstream_ofIGIMGI:19247142290270 PMID:21413931MGIPMID:21413931
Prr5lMouseregulation of fibroblast migration involved_inIMP 2290270 PMID:22609986UniProtPMID:22609986
Prr5lMouseregulation of fibroblast migration involved_inISOUniProtKB:Q6MZQ02290270 GO_CentralGO_REF:0000119
Prr5lMouseTORC2 signaling involved_inIMP 2290270 PMID:22609986UniProtPMID:22609986
Prr5lMouseTORC2 signaling involved_inISOUniProtKB:Q6MZQ02290270 GO_CentralGO_REF:0000119
Prr5lMouseTORC2 signaling involved_inIBAPANTHER:PTN001286149 more ...2290270 GO_CentralGO_REF:0000033
1 to 18 of 18 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prr5lMousemitochondrion located_inHDA 2290270 PMID:18614015MGIPMID:18614015
Prr5lMouseTORC2 complex part_ofISSUniProtKB:Q6MZQ02290270 UniProtGO_REF:0000024
Prr5lMouseTORC2 complex part_ofIBAPANTHER:PTN001286149 more ...2290270 GO_CentralGO_REF:0000033
Prr5lMouseTORC2 complex part_ofISOUniProtKB:Q6MZQ02290270 GO_CentralGO_REF:0000119

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prr5lMouseprotein binding enablesISOUniProtKB:P26651 and UniProtKB:Q6R3279068941 PMID:21964062UniProtPMID:21964062
Prr5lMouseprotein binding enablesISOUniProtKB:O75031 more ...9068941 PMID:32296183IntActPMID:32296183
Prr5lMouseubiquitin protein ligase binding enablesISOUniProtKB:Q6MZQ02290270 GO_CentralGO_REF:0000119
Prr5lMouseubiquitin protein ligase binding enablesIEAUniProtKB:Q6MZQ0 and ensembl:ENSP000004350502290270 EnsemblGO_REF:0000107

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Prr5lMousemTOR signaling pathway   ISOPRR5L (Homo sapiens)11535033 RGD 

#
Reference Title
Reference Citation
1. mTOR signaling in growth control and disease. Laplante M and Sabatini DM, Cell. 2012 Apr 13;149(2):274-93. doi: 10.1016/j.cell.2012.03.017.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:16829211   PMID:18287559   PMID:18614015   PMID:21267068   PMID:21413931   PMID:21873635   PMID:22609986   PMID:37196079  



Prr5l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392101,543,455 - 101,713,428 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2101,544,630 - 101,713,372 (-)EnsemblGRCm39 Ensembl
GRCm382101,713,110 - 101,883,052 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2101,714,285 - 101,883,027 (-)EnsemblGRCm38mm10GRCm38
MGSCv372101,554,442 - 101,679,137 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362101,517,087 - 101,598,456 (-)NCBIMGSCv36mm8
MGSCv362102,525,319 - 102,608,002 (-)NCBIMGSCv36mm8
Celera2102,939,329 - 103,063,664 (-)NCBICelera
Cytogenetic Map2E2NCBI
cM Map253.93NCBI
PRR5L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381136,296,288 - 36,465,204 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1136,296,288 - 36,465,204 (+)EnsemblGRCh38hg38GRCh38
GRCh371136,317,838 - 36,486,754 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361136,354,131 - 36,443,330 (+)NCBINCBI36Build 36hg18NCBI36
Celera1136,466,181 - 36,637,921 (+)NCBICelera
Cytogenetic Map11p13-p12NCBI
HuRef1136,017,351 - 36,188,822 (+)NCBIHuRef
CHM1_11136,315,873 - 36,485,532 (+)NCBICHM1_1
T2T-CHM13v2.01136,436,630 - 36,607,651 (+)NCBIT2T-CHM13v2.0
Prr5l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83108,458,107 - 108,628,552 (-)NCBIGRCr8
mRatBN7.2388,001,951 - 88,173,532 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl388,003,617 - 88,082,763 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx391,497,849 - 91,579,208 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03100,096,877 - 100,178,236 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0397,925,761 - 98,004,913 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0391,290,207 - 91,461,208 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl391,291,875 - 91,370,167 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0397,950,297 - 98,119,477 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4386,868,129 - 86,948,468 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1386,764,033 - 86,844,895 (-)NCBI
Celera387,111,242 - 87,189,435 (-)NCBICelera
Cytogenetic Map3q31NCBI
Prr5l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554229,972,588 - 10,048,669 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554229,972,588 - 10,069,411 (-)NCBIChiLan1.0ChiLan1.0
PRR5L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2938,517,112 - 38,686,799 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11138,521,756 - 38,691,440 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01136,269,291 - 36,438,954 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11136,143,905 - 36,311,659 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1136,223,385 - 36,311,659 (+)Ensemblpanpan1.1panPan2
PRR5L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11831,708,888 - 31,849,365 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1831,706,546 - 31,849,491 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1831,313,676 - 31,455,863 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01832,316,310 - 32,459,199 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1832,317,883 - 32,387,382 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11831,886,211 - 32,028,310 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01831,472,745 - 31,613,238 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01832,108,514 - 32,250,549 (-)NCBIUU_Cfam_GSD_1.0
Prr5l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494728,770,806 - 28,922,834 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365331,895,380 - 1,975,824 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365331,895,594 - 1,975,442 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRR5L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl224,646,871 - 24,812,610 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1224,646,865 - 24,812,642 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2226,811,301 - 26,949,585 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PRR5L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1128,771,858 - 28,951,201 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl128,771,793 - 28,841,572 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038125,912,249 - 126,006,339 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prr5l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476710,781,954 - 10,950,243 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476710,781,954 - 10,950,142 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Prr5l
11157 total Variants

Predicted Target Of
Summary Value
Count of predictions:3722
Count of miRNA genes:833
Interacting mature miRNAs:1121
Transcripts:ENSMUST00000043845, ENSMUST00000124802, ENSMUST00000125985, ENSMUST00000127358, ENSMUST00000140387, ENSMUST00000141814, ENSMUST00000144549, ENSMUST00000154525, ENSMUST00000163762, ENSMUST00000171088
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 51 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1301909Smdq2_msegregation of mitochondrial DNA QTL 2 (mouse)Not determined292778465126778607Mouse
25394565Skmw50_mskeletal muscle weight 50, soleus (mouse)297783888102476127Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1301660Iba1_minduction of brown adipocytes 1 (mouse)Not determined267647887101648142Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11532731Sluc31a_msusceptibility to lung cancer 31a (mouse)288015003122015170Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse

1 to 10 of 51 rows
2600010E01Rik  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382101,716,396 - 101,716,470UniSTSGRCm38
MGSCv372101,556,553 - 101,556,627UniSTSGRCm37
Celera2102,941,437 - 102,941,511UniSTS
Cytogenetic Map2E2UniSTS
cM Map2 UniSTS






1 to 30 of 30 rows
RefSeq Transcripts NM_001083810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_175181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006500236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006500240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006500241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK011178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL929534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL929571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB166811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC172132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC172133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC172158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX521705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY737227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF171561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF171835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ073028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 30 rows

Ensembl Acc Id: ENSMUST00000043845   ⟹   ENSMUSP00000042167
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,546,586 - 101,628,053 (-)Ensembl
GRCm38.p6 Ensembl2101,716,241 - 101,797,708 (-)Ensembl
Ensembl Acc Id: ENSMUST00000124802   ⟹   ENSMUSP00000118502
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,602,485 - 101,628,399 (-)Ensembl
GRCm38.p6 Ensembl2101,772,140 - 101,798,054 (-)Ensembl
Ensembl Acc Id: ENSMUST00000125985   ⟹   ENSMUSP00000122996
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,571,693 - 101,669,325 (-)Ensembl
GRCm38.p6 Ensembl2101,741,348 - 101,838,980 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127358
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,662,416 - 101,713,372 (-)Ensembl
GRCm38.p6 Ensembl2101,832,071 - 101,883,027 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140387
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,602,640 - 101,628,078 (-)Ensembl
GRCm38.p6 Ensembl2101,772,295 - 101,797,733 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141814   ⟹   ENSMUSP00000118537
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,547,595 - 101,627,995 (-)Ensembl
GRCm38.p6 Ensembl2101,717,250 - 101,797,650 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144549   ⟹   ENSMUSP00000116266
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,602,529 - 101,644,678 (-)Ensembl
GRCm38.p6 Ensembl2101,772,184 - 101,814,333 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154525   ⟹   ENSMUSP00000120192
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,588,863 - 101,713,359 (-)Ensembl
GRCm38.p6 Ensembl2101,758,518 - 101,883,014 (-)Ensembl
Ensembl Acc Id: ENSMUST00000163762   ⟹   ENSMUSP00000127530
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,544,630 - 101,669,325 (-)Ensembl
GRCm38.p6 Ensembl2101,714,285 - 101,838,980 (-)Ensembl
Ensembl Acc Id: ENSMUST00000171088   ⟹   ENSMUSP00000130152
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2101,544,630 - 101,628,052 (-)Ensembl
GRCm38.p6 Ensembl2101,714,285 - 101,797,707 (-)Ensembl
RefSeq Acc Id: NM_001083810   ⟹   NP_001077279
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,544,630 - 101,628,052 (-)NCBI
GRCm382101,714,285 - 101,797,707 (-)NCBI
MGSCv372101,554,442 - 101,679,137 (-)RGD
Celera2102,939,329 - 103,063,664 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001110849   ⟹   NP_001104319
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,544,630 - 101,669,325 (-)NCBI
GRCm382101,714,285 - 101,838,980 (-)NCBI
MGSCv372101,554,442 - 101,679,137 (-)RGD
Celera2102,939,329 - 103,063,664 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001355625   ⟹   NP_001342554
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,544,630 - 101,713,372 (-)NCBI
GRCm382101,714,285 - 101,883,027 (-)NCBI
Sequence:
RefSeq Acc Id: NM_175181   ⟹   NP_780390
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,544,630 - 101,628,052 (-)NCBI
GRCm382101,714,285 - 101,797,707 (-)NCBI
MGSCv372101,554,442 - 101,679,137 (-)RGD
Celera2102,939,329 - 103,063,664 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006500236   ⟹   XP_006500299
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,543,455 - 101,657,663 (-)NCBI
GRCm382101,713,110 - 101,827,602 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006500240   ⟹   XP_006500303
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,544,616 - 101,628,396 (-)NCBI
GRCm382101,714,271 - 101,798,060 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006500241   ⟹   XP_006500304
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,543,455 - 101,644,673 (-)NCBI
GRCm382101,713,110 - 101,814,390 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319278   ⟹   XP_017174767
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,543,455 - 101,713,428 (-)NCBI
GRCm382101,713,110 - 101,828,008 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162596   ⟹   XP_036018489
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,543,455 - 101,713,428 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162597   ⟹   XP_036018490
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,543,455 - 101,713,428 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162598   ⟹   XP_036018491
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,543,455 - 101,713,428 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162599   ⟹   XP_036018492
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,543,455 - 101,713,428 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162600   ⟹   XP_036018493
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392101,543,455 - 101,661,142 (-)NCBI
Sequence:
1 to 5 of 21 rows
1 to 5 of 21 rows
RefSeq Acc Id: NP_001077279   ⟸   NM_001083810
- UniProtKB: Q80Y78 (UniProtKB/Swiss-Prot),   B7ZWM2 (UniProtKB/Swiss-Prot),   Q8BIT0 (UniProtKB/Swiss-Prot),   A2AVJ5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_780390   ⟸   NM_175181
- UniProtKB: Q80Y78 (UniProtKB/Swiss-Prot),   B7ZWM2 (UniProtKB/Swiss-Prot),   Q8BIT0 (UniProtKB/Swiss-Prot),   A2AVJ5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001104319   ⟸   NM_001110849
- UniProtKB: Q80Y78 (UniProtKB/Swiss-Prot),   B7ZWM2 (UniProtKB/Swiss-Prot),   Q8BIT0 (UniProtKB/Swiss-Prot),   A2AVJ5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006500299   ⟸   XM_006500236
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006500304   ⟸   XM_006500241
- Peptide Label: isoform X5
- UniProtKB: Q80Y78 (UniProtKB/Swiss-Prot),   B7ZWM2 (UniProtKB/Swiss-Prot),   Q8BIT0 (UniProtKB/Swiss-Prot),   A2AVJ5 (UniProtKB/Swiss-Prot)
- Sequence:

Name Modeler Protein Id AA Range Protein Structure
AF-A2AVJ5-F1-model_v2 AlphaFold A2AVJ5 1-370 view protein structure

RGD ID:6832141
Promoter ID:MM_KWN:30730
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000043845,   NM_001083810,   OTTMUST00000035741,   OTTMUST00000035742,   OTTMUST00000035743
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362101,637,734 - 101,638,234 (-)MPROMDB
RGD ID:6878036
Promoter ID:EPDNEW_M2469
Type:single initiation site
Name:Prr5l_2
Description:Mus musculus proline rich 5 like , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2470  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382101,773,047 - 101,773,107EPDNEW
RGD ID:6878038
Promoter ID:EPDNEW_M2470
Type:multiple initiation site
Name:Prr5l_1
Description:Mus musculus proline rich 5 like , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2469  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382101,797,684 - 101,797,744EPDNEW


1 to 28 of 28 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000032841 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000043845 ENTREZGENE
  ENSMUST00000043845.14 UniProtKB/Swiss-Prot
  ENSMUST00000163762 ENTREZGENE
  ENSMUST00000163762.8 UniProtKB/Swiss-Prot
  ENSMUST00000171088 ENTREZGENE
  ENSMUST00000171088.8 UniProtKB/Swiss-Prot
InterPro Bit61/PRR5 UniProtKB/Swiss-Prot
KEGG Report mmu:72446 UniProtKB/Swiss-Prot
MGD MGI:1919696 ENTREZGENE
NCBI Gene 72446 ENTREZGENE
PANTHER PROLINE-RICH PROTEIN 5-LIKE UniProtKB/Swiss-Prot
  PTHR32428 UniProtKB/Swiss-Prot
Pfam HbrB UniProtKB/Swiss-Prot
PhenoGen Prr5l PhenoGen
UniProt A2AVJ5 ENTREZGENE
  B0R102_MOUSE UniProtKB/TrEMBL
  B0R103_MOUSE UniProtKB/TrEMBL
  B0R105_MOUSE UniProtKB/TrEMBL
  B0R106_MOUSE UniProtKB/TrEMBL
  B7ZWM2 ENTREZGENE
  F6VRG5_MOUSE UniProtKB/TrEMBL
  PRR5L_MOUSE UniProtKB/Swiss-Prot
  Q80Y78 ENTREZGENE
  Q8BIT0 ENTREZGENE
UniProt Secondary B7ZWM2 UniProtKB/Swiss-Prot
  Q80Y78 UniProtKB/Swiss-Prot
  Q8BIT0 UniProtKB/Swiss-Prot
1 to 28 of 28 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-05 Prr5l  proline rich 5 like  4833411O04Rik  RIKEN cDNA 4833411O04 gene  Data merged from RGD:1611330 737654 PROVISIONAL
2016-04-01 Prr5l  proline rich 5 like  Gm4347  predicted gene 4347  Data merged from RGD:2299417 737654 PROVISIONAL