Dssc2_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Dssc2_m (dextran sodium sulfate induced colitis QTL2 (mouse)) Mus musculus

Symbol: Dssc2_m
Name: dextran sodium sulfate induced colitis QTL2 (mouse)
RGD ID: 1302174
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39224,224,632 - 148,700,377MOUSEQTLGRCm39
GRCm38224,334,620 - 148,858,457MOUSEQTLGRCm38
MGSCv37263,015,767 - 97,015,926 (+)MOUSEQTLGRCm37
MGSCv3264,768,157 - 100,768,157RGD
cM Map247.93MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dssc2_mMousecolitis  IAGP 5509061 MGIPMID:9933561
Dssc2_mMousedigestive/alimentary phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:9933561
Dssc2_mMouseimmune system phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:9933561

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:9933561  



1 to 20 of 4429 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
733437Il1rninterleukin 1 receptor antagonist22422687224241503Mouse
1321105Psd4pleckstrin and Sec7 domain containing 422425757124299882Mouse
163657687LOC128924465CapStarr-seq enhancer MGSCv37_chr2:24238515-2423866822427300724273160Mouse
401838456LOC132408592STARR-positive B cell enhancer ABC_E1112522427510824275408Mouse
730850Pax8paired box 822431056324365611Mouse
9601278Gm13415predicted gene 1341522433040524355402Mouse
39129672LOC108254696Pax8 promoter region22436547924365947Mouse
2294772Gm13418predicted gene 1341822438404424385729Mouse
10006064Gm39769predicted gene, 3976922441224724475555Mouse
39130549LOC108281108Pax8 CNS1 enhancer22442908824429304Mouse
39131189LOC108281109Pax8 CNS87 enhancer22445019424450621Mouse
2295896Gm13416predicted gene 1341622448258324484524Mouse
735793Cacna1bcalcium channel, voltage-dependent, N type, alpha 1B subunit22449387224653210Mouse
163711180LOC128924466CapStarr-seq enhancer MGSCv37_chr2:24603469-2460368922463787424638181Mouse
1316869Ehmt1euchromatic histone methyltransferase 122468078124809658Mouse
401840950LOC132408593STARR-positive B cell enhancer mm9_chr2:24766046-2476634722480053824800839Mouse
1320586Arrdc1arrestin domain containing 122481536424825347Mouse
401833274LOC132408594STARR-positive B cell enhancer ABC_E63422482518524825486Mouse
1332189Zmynd19zinc finger, MYND domain containing 1922483978924850882Mouse
1312557Dph7diphthamine biosynethesis 722485218324862198Mouse

1 to 20 of 4429 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 196 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
13506762Tbvq2_mtrabecular bone volume QTL 2 (mouse)2115430481124741920Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
13506763Tbvq1_mtrabecular bone volume QTL 1 (mouse)2126041920135441920Mouse
25394565Skmw50_mskeletal muscle weight 50, soleus (mouse)297783888102476127Mouse
4142133Pbwg1.6_mpostnatal body weight growth 1.6 (mouse)Not determined3579732469797406Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22530805156971811Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse

1 to 10 of 196 rows


Database
Acc Id
Source(s)
MGD MGI:1345664

Note Type Note Reference