Or5av1-ps1 (olfactory receptor family 5 subfamily AV member 1, pseudogene 1) - Rat Genome Database

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Gene: Or5av1-ps1 (olfactory receptor family 5 subfamily AV member 1, pseudogene 1) Mus musculus
Analyze
Symbol: Or5av1-ps1
Name: olfactory receptor family 5 subfamily AV member 1, pseudogene 1
RGD ID: 2302704
MGI Page MGI
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG257832; GA_x5J8B7W3Y5M-123838-124302; Gm5025; olfactory receptor 1092, pseudogene 1; Olfr1092-ps1
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39286,608,755 - 86,609,219 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl286,608,847 - 86,609,244 (+)EnsemblGRCm39 Ensembl
GRCm38286,778,411 - 86,778,875 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl286,778,503 - 86,778,900 (+)EnsemblGRCm38mm10GRCm38
MGSCv37286,618,568 - 86,619,032 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36286,579,250 - 86,579,714 (+)NCBIMGSCv36mm8
Celera288,375,526 - 88,375,990 (+)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.86NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:11875048   PMID:14611657   PMID:32295537  


Genomics

Variants

.
Variants in Or5av1-ps1
12 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
13463482Mchq17_mmean corpuscular hemoglobin QTL 17 (mouse)267647887101648142Mouse
4141657Mohg1_mmodifier of hg 1 (mouse)Not determined276678758103095823Mouse
1301897Scc2_mcolon tumor susceptibility 2 (mouse)Not determined28572426990410991Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1300662Etohila_methanol induced locomotor activity (mouse)Not determined26300595497006113Mouse
11049565Lmr28g_mleishmaniasis resistance 28g (mouse)286095716120095823Mouse
1300852Lmr14_mleishmaniasis resistance 14 (mouse)Not determined286095716120095823Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
10053681Lith24_mlithogenic gene 24 (mouse)Not determined26300595497006113Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
4142088Parms1_mpatched associated RMS 1 (mouse)Not determined74524117114123532Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
11038697Ltpr2d_mLeishmania tropica response 2d (mouse)286095716120095823Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
12738429Lfibq18_mliver fibrosis QTL 18 (mouse)25791999191919991Mouse
1301660Iba1_minduction of brown adipocytes 1 (mouse)Not determined267647887101648142Mouse
15092054Egrme5_mearly growth rate, maternal effect 5 (mouse)282190187118004745Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
10043894Bw22_mbody weight QTL 22 (mouse)Not determined280895334114895334Mouse
1301703Bomd3_mbone mineral density 3 (mouse)Not determined26300595497006113Mouse
1301873Hsl1_mhyperoxia susceptibility locus 1 (mouse)Not determined26357015497570301Mouse
1558901Skmw8_mskeletal muscle weight 8 (mouse)Not determined284008488118008593Mouse
4141406Alpq2_malcohol preference QTL 2 (mouse)Not determined25752411791524288Mouse
10044002Hdl7_mHDL level 7 (mouse)Not determined26300595497006113Mouse
1301882Etohc2_methanol consumption 2 (mouse)Not determined268724269102724407Mouse
1301048Actre2_mactivity response to ethanol 2 (mouse)Not determined26300595497006113Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1301405Etohr_methanol response acute (mouse)Not determined26300595497006113Mouse
1301374Cplaq7_mcircadian period of locomotor activity 7 (mouse)Not determined276421483110421651Mouse
11038698Ltpr2c_mLeishmania tropica response 2c (mouse)286095716120095823Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1301948Elsgp3_melevated serum gp70 3 (mouse)Not determined268724269102724407Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000216544
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl286,608,847 - 86,609,244 (+)Ensembl
GRCm38.p6 Ensembl286,778,503 - 86,778,900 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000111295 Ensembl
MGD MGI:3030926 ENTREZGENE
NCBI Gene 257832 ENTREZGENE
PhenoGen Or5av1-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or5av1-ps1  olfactory receptor family 5 subfamily AV member 1, pseudogene 1  Olfr1092-ps1  olfactory receptor 1092, pseudogene 1  Symbol and/or name change 5135510 APPROVED
2015-05-26 Olfr1092-ps1  olfactory receptor 1092, pseudogene 1  Olfr1092-ps1  olfactory receptor 1092, pseudogene 1  Data merged from RGD:1622699 737654 PROVISIONAL
2014-09-17 Olfr1092-ps1  olfactory receptor 1092, pseudogene 1  Gm5025  predicted gene 5025  Symbol and/or name change 5135510 APPROVED