Ovol2 (ovo like zinc finger 2) - Rat Genome Database

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Gene: Ovol2 (ovo like zinc finger 2) Mus musculus
Analyze
Symbol: Ovol2
Name: ovo like zinc finger 2
RGD ID: 1314568
MGI Page MGI
Description: Enables DNA binding activity; DNA-binding transcription factor activity, RNA polymerase II-specific; and chromatin binding activity. Involved in several processes, including negative regulation of epithelial to mesenchymal transition; negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway; and regulation of gene expression. Acts upstream of or within several processes, including circulatory system development; positive regulation of keratinocyte differentiation; and tube morphogenesis. Located in nucleus. Is expressed in several structures, including early conceptus; genitourinary system; gut; head surface ectoderm; and otocyst. Human ortholog(s) of this gene implicated in posterior polymorphous corneal dystrophy 1. Orthologous to human OVOL2 (ovo like zinc finger 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1700108N11Rik; 1810007D21Rik; M-; M-O; M-OV; M-OVO; M-OVO-A; M-OVO-B; mo; MOVO; MOVO-B zinc finger protein; MOVO-C zinc finger protein; movo2; O; OVO homolog-like 2; ovo-like 2; Ovo2; transcription factor Ovo-like 2; Zfp33; Zfp339; zinc finger OVO2; zinc finger protein 339; zinc finger protein mOVO
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392144,147,095 - 144,174,000 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2144,147,095 - 144,174,066 (-)EnsemblGRCm39 Ensembl
GRCm382144,305,175 - 144,332,080 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2144,305,175 - 144,332,146 (-)EnsemblGRCm38mm10GRCm38
MGSCv372144,130,911 - 144,157,816 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362143,996,616 - 144,023,521 (-)NCBIMGSCv36mm8
Celera2145,493,569 - 145,520,509 (-)NCBICelera
Cytogenetic Map2G1NCBI
cM Map270.99NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IBA,IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal angiogenesis  (IAGP)
abnormal aortic sac morphology  (IAGP)
abnormal blood circulation  (IAGP)
abnormal cephalic neural fold morphology  (IAGP)
abnormal digestive system development  (IAGP)
abnormal dorsal-ventral axis patterning  (IAGP)
abnormal embryo turning  (IAGP)
abnormal embryonic neuroepithelium morphology  (IAGP)
abnormal embryonic tissue morphology  (IAGP)
abnormal endocardium morphology  (IAGP)
abnormal extraembryonic tissue morphology  (IAGP)
abnormal forebrain development  (IAGP)
abnormal foregut morphology  (IAGP)
abnormal head mesenchyme morphology  (IAGP)
abnormal heart development  (IAGP)
abnormal heart looping  (IAGP)
abnormal heart tube morphology  (IAGP)
abnormal heart ventricle morphology  (IAGP)
abnormal hindgut morphology  (IAGP)
abnormal neural crest cell delamination  (IAGP)
abnormal notochord morphology  (IAGP)
abnormal optic eminence morphology  (IAGP)
abnormal optic pit morphology  (IAGP)
abnormal placenta vasculature  (IAGP)
abnormal placental labyrinth vasculature morphology  (IAGP)
abnormal prechordal plate morphology  (IAGP)
abnormal surface ectoderm morphology  (IAGP)
abnormal vasculogenesis  (IAGP)
abnormal vitelline vascular remodeling  (IAGP)
abnormal vitelline vasculature morphology  (IAGP)
absent intersomitic vessels  (IAGP)
absent myocardial trabeculae  (IAGP)
absent otic pit  (IAGP)
absent pharyngeal arches  (IAGP)
absent vitelline blood vessels  (IAGP)
cardia bifida  (IAGP)
common ventricle  (IAGP)
decreased embryo size  (IAGP)
decreased embryonic neuroepithelial cell proliferation  (IAGP)
embryonic growth retardation  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
hemorrhage  (IAGP)
incomplete rostral neuropore closure  (IAGP)
increased embryonic neuroepithelium thickness  (IAGP)
increased neural crest cell apoptosis  (IAGP)
open neural tube  (IAGP)
small heart  (IAGP)
small pharyngeal arch  (IAGP)
spina bifida  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9468311   PMID:9808631   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12213202   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15225875   PMID:15489334   PMID:15716349  
PMID:16141072   PMID:16141073   PMID:16423343   PMID:17049212   PMID:17536020   PMID:17573777   PMID:18287559   PMID:18799693   PMID:19700410   PMID:20412781   PMID:21267068   PMID:21636736  
PMID:21873635   PMID:23319585   PMID:24448552   PMID:24735878   PMID:24735879   PMID:25267199   PMID:25788534   PMID:26494787   PMID:26619963   PMID:27310661   PMID:28059165   PMID:28455959  
PMID:29237740   PMID:30413481   PMID:30718289   PMID:31401394   PMID:31759386   PMID:32005677   PMID:32244352   PMID:33989778   PMID:35021086   PMID:35029669   PMID:36228616   PMID:37660780  
PMID:37971355   PMID:38012144  


Genomics

Comparative Map Data
Ovol2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392144,147,095 - 144,174,000 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2144,147,095 - 144,174,066 (-)EnsemblGRCm39 Ensembl
GRCm382144,305,175 - 144,332,080 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2144,305,175 - 144,332,146 (-)EnsemblGRCm38mm10GRCm38
MGSCv372144,130,911 - 144,157,816 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362143,996,616 - 144,023,521 (-)NCBIMGSCv36mm8
Celera2145,493,569 - 145,520,509 (-)NCBICelera
Cytogenetic Map2G1NCBI
cM Map270.99NCBI
OVOL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382018,024,152 - 18,059,188 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2017,956,979 - 18,059,188 (-)EnsemblGRCh38hg38GRCh38
GRCh372018,004,796 - 18,039,832 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362017,952,796 - 17,986,521 (-)NCBINCBI36Build 36hg18NCBI36
Build 342017,952,795 - 17,986,521NCBI
Celera2018,079,347 - 18,113,079 (-)NCBICelera
Cytogenetic Map20p11.23NCBI
HuRef2017,967,242 - 18,001,367 (-)NCBIHuRef
CHM1_12018,004,853 - 18,038,551 (-)NCBICHM1_1
T2T-CHM13v2.02018,075,263 - 18,110,299 (-)NCBIT2T-CHM13v2.0
Ovol2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83152,130,767 - 152,160,487 (-)NCBIGRCr8
mRatBN7.23131,677,391 - 131,707,123 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3131,677,391 - 131,708,359 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3135,601,228 - 135,630,393 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03144,185,320 - 144,214,479 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03141,888,510 - 141,917,671 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03138,433,990 - 138,464,511 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3138,433,990 - 138,462,063 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03144,867,735 - 144,898,199 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43132,842,267 - 132,871,206 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13132,747,836 - 132,777,519 (-)NCBI
Celera3130,572,320 - 130,601,420 (-)NCBICelera
Cytogenetic Map3q41NCBI
Ovol2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541526,825,284 - 26,843,438 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541526,825,284 - 26,843,438 (-)NCBIChiLan1.0ChiLan1.0
OVOL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22118,914,381 - 18,950,868 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12018,911,219 - 18,947,699 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02017,983,277 - 18,019,441 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12017,961,749 - 17,996,364 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2017,962,123 - 17,994,486 (-)Ensemblpanpan1.1panPan2
OVOL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1245,020,608 - 5,050,487 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl245,020,813 - 5,050,309 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha244,949,757 - 4,980,761 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0245,427,079 - 5,458,074 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl245,428,834 - 5,457,893 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1245,039,068 - 5,070,261 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0245,133,467 - 5,164,662 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0245,409,939 - 5,440,959 (+)NCBIUU_Cfam_GSD_1.0
Ovol2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640153,663,620 - 153,696,671 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364852,096,495 - 2,128,540 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364852,096,495 - 2,128,002 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OVOL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1726,417,795 - 26,451,928 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11726,417,793 - 26,451,707 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21729,918,120 - 29,956,051 (+)NCBISscrofa10.2Sscrofa10.2susScr3
OVOL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1247,082,294 - 47,118,880 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl247,082,167 - 47,117,521 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660781,750,940 - 1,797,786 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ovol2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474118,995,246 - 19,012,910 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474118,994,689 - 19,012,381 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ovol2
637 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:454
Count of miRNA genes:242
Interacting mature miRNAs:258
Transcripts:ENSMUST00000037423, ENSMUST00000103171, ENSMUST00000138582
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110489658144489807Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111173704145173821Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111173704145173821Mouse
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111173704145173821Mouse
1301201Chab1_mcholesterol absorption 1 (mouse)Not determined2111551028145551163Mouse
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112212746146213005Mouse
11038699Ltpr2b_mLeishmania tropica response 2b (mouse)2112212746146213005Mouse
11038700Ltpr2a_mLeishmania tropica response 2a (mouse)2112212746146213005Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115212857149212994Mouse
11038696Ltpr2f_mLeishmania tropica response 2f (mouse)2115212857149212994Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2122883015156883131Mouse
1301066Otx2m2_morthodenticle homolog 2 (Drosophila) modifier 2 (mouse)Not determined2123231973148700377Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2123937311157937424Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127664019161664118Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127664019161664118Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129341920163341920Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133144911167145058Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133144911167145058Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
1300647Nktcn2_mnatural killer T cell numbers 2 (mouse)Not determined2138737416145893953Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
4141281Ssrq1_mstress response QTL 1 (mouse)Not determined142059301145893953Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
4141033Wg2d_mweight gain in high growth mice 2d (mouse)Not determined143773445160303008Mouse
1357484Bsbob_mBSB obesity (mouse)Not determined2143773445165665019Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_026924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_152947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB101294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB101299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL808123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY090537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY090538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY098454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000037423   ⟹   ENSMUSP00000044026
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2144,147,095 - 144,174,066 (-)Ensembl
GRCm38.p6 Ensembl2144,305,175 - 144,332,146 (-)Ensembl
RefSeq Acc Id: ENSMUST00000103171   ⟹   ENSMUSP00000099460
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2144,147,095 - 144,173,615 (-)Ensembl
GRCm38.p6 Ensembl2144,305,175 - 144,331,695 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138582
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2144,159,697 - 144,173,246 (-)Ensembl
GRCm38.p6 Ensembl2144,317,777 - 144,331,326 (-)Ensembl
RefSeq Acc Id: NM_026924   ⟹   NP_081200
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392144,147,095 - 144,174,000 (-)NCBI
GRCm382144,305,175 - 144,332,080 (-)ENTREZGENE
MGSCv372144,130,911 - 144,157,816 (-)RGD
Celera2145,493,569 - 145,520,509 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_152947   ⟹   NP_694455
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392144,147,095 - 144,173,299 (-)NCBI
GRCm382144,305,175 - 144,331,362 (-)NCBI
MGSCv372144,130,911 - 144,157,816 (-)RGD
Celera2145,493,569 - 145,520,509 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006498544   ⟹   XP_006498607
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392144,147,095 - 144,172,590 (-)NCBI
GRCm382144,305,175 - 144,330,670 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_081200   ⟸   NM_026924
- Peptide Label: isoform A
- UniProtKB: Q8K0D6 (UniProtKB/Swiss-Prot),   Q8CIV6 (UniProtKB/Swiss-Prot),   Q6F661 (UniProtKB/Swiss-Prot),   Q505Q7 (UniProtKB/Swiss-Prot),   Q9D949 (UniProtKB/Swiss-Prot),   Q8CIV7 (UniProtKB/Swiss-Prot),   Q3TIV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_694455   ⟸   NM_152947
- Peptide Label: isoform B
- UniProtKB: Q3TIV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498607   ⟸   XM_006498544
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000044026   ⟸   ENSMUST00000037423
RefSeq Acc Id: ENSMUSP00000099460   ⟸   ENSMUST00000103171
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8CIV7-F1-model_v2 AlphaFold Q8CIV7 1-274 view protein structure

Promoters
RGD ID:6831989
Promoter ID:MM_KWN:32030
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000007457,   OTTMUST00000007536,   OTTMUST00000007537,   UC008MQW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362144,156,711 - 144,157,211 (-)MPROMDB
RGD ID:6878982
Promoter ID:EPDNEW_M2942
Type:initiation region
Name:Ovol2_2
Description:Mus musculus ovo like zinc finger 2 , transcript variant A, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2943  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382144,331,362 - 144,331,422EPDNEW
RGD ID:6878984
Promoter ID:EPDNEW_M2943
Type:initiation region
Name:Ovol2_1
Description:Mus musculus ovo like zinc finger 2 , transcript variant A, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2942  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382144,332,145 - 144,332,205EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1338039 AgrOrtholog
Ensembl Genes ENSMUSG00000037279 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000037423 ENTREZGENE
  ENSMUST00000037423.4 UniProtKB/Swiss-Prot
  ENSMUST00000103171 ENTREZGENE
  ENSMUST00000103171.10 UniProtKB/Swiss-Prot
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ovo-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:107586 UniProtKB/Swiss-Prot
MGD MGI:1338039 ENTREZGENE
NCBI Gene 107586 ENTREZGENE
PANTHER PTHR10032 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRANSCRIPTION FACTOR OVO-LIKE 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ovol2 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt OVOL2_MOUSE UniProtKB/Swiss-Prot
  Q3TIV4 ENTREZGENE, UniProtKB/TrEMBL
  Q505Q7 ENTREZGENE
  Q6F661 ENTREZGENE
  Q8CIV6 ENTREZGENE
  Q8CIV7 ENTREZGENE
  Q8K0D6 ENTREZGENE
  Q9D949 ENTREZGENE
UniProt Secondary Q505Q7 UniProtKB/Swiss-Prot
  Q6F661 UniProtKB/Swiss-Prot
  Q8CIV6 UniProtKB/Swiss-Prot
  Q8K0D6 UniProtKB/Swiss-Prot
  Q9D949 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-29 Ovol2  ovo like zinc finger 2    ovo-like 2 (Drosophila)  Symbol and/or name change 5135510 APPROVED
2015-05-05 Ovol2  ovo-like 2 (Drosophila)  Ovol2  ovo-like 2 (Drosophila)  Data merged from RGD:1556923 737654 PROVISIONAL