Golga2 (golgin A2) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Golga2 (golgin A2) Mus musculus
Analyze
Symbol: Golga2
Name: golgin A2
RGD ID: 1619058
MGI Page MGI
Description: Enables importin-alpha family protein binding activity. Involved in asymmetric cell division and meiotic spindle assembly. Acts upstream of or within Golgi localization and positive regulation of axonogenesis. Located in Golgi apparatus; perinuclear region of cytoplasm; and spindle pole. Is expressed in several structures, including brain; eye; gonad; musculoskeletal system; and unsegmented mesenchyme. Orthologous to human GOLGA2 (golgin A2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 130 kDa cis-Golgi matrix protein; AW555139; GM130; golgi autoantigen, golgin subfamily a, 2; Golgin subfamily A member 2; golgin-95; KIAA4150; mKIAA4150; SY11 protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm13474  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,178,299 - 32,197,925 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl232,177,396 - 32,197,933 (+)EnsemblGRCm39 Ensembl
GRCm38232,288,287 - 32,307,913 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,287,384 - 32,307,921 (+)EnsemblGRCm38mm10GRCm38
MGSCv37232,143,773 - 32,163,441 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36232,109,393 - 32,129,930 (+)NCBIMGSCv36mm8
Celera231,992,729 - 32,012,412 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal acrosome assembly  (IAGP)
abnormal actin cytoskeleton morphology  (IAGP)
abnormal cell cytoskeleton morphology  (IAGP)
abnormal Golgi apparatus morphology  (IAGP)
abnormal Golgi cisterna morphology  (IAGP)
abnormal Golgi vesicle transport  (IAGP)
abnormal hepatocyte morphology  (IAGP)
abnormal liver morphology  (IAGP)
abnormal lung morphology  (IAGP)
abnormal microtubule cytoskeleton morphology  (IAGP)
abnormal proacrosomal vesicle fusion  (IAGP)
abnormal Purkinje cell dendrite morphology  (IAGP)
abnormal Purkinje cell morphology  (IAGP)
abnormal sperm head morphology  (IAGP)
abnormal sperm mitochondrial sheath morphology  (IAGP)
abnormal sperm nucleus morphology  (IAGP)
abnormal spermatid morphology  (IAGP)
abnormal spermiogenesis  (IAGP)
abnormal surfactant physiology  (IAGP)
abnormal type II pneumocyte morphology  (IAGP)
absent acrosome  (IAGP)
absent sperm mitochondrial sheath  (IAGP)
ataxia  (IAGP)
decreased body length  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased Purkinje cell number  (IAGP)
decreased sperm progressive motility  (IAGP)
decreased testis weight  (IAGP)
globozoospermia  (IAGP)
immotile sperm  (IAGP)
impaired coordination  (IAGP)
increased alveolar macrophage number  (IAGP)
increased neuron apoptosis  (IAGP)
limb grasping  (IAGP)
liver fibrosis  (IAGP)
male infertility  (IAGP)
oligozoospermia  (IAGP)
postnatal growth retardation  (IAGP)
premature death  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
pulmonary fibrosis  (IAGP)
Purkinje cell degeneration  (IAGP)
slow postnatal weight gain  (IAGP)
small cerebellum  (IAGP)
small testis  (IAGP)
thin cerebellar molecular layer  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11044607   PMID:11076861   PMID:11217851   PMID:11784862   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12646573  
PMID:14622145   PMID:14718562   PMID:14728599   PMID:15078902   PMID:15229288   PMID:15452145   PMID:15489334   PMID:15782199   PMID:15800058   PMID:16141072   PMID:16141073   PMID:16336229  
PMID:16399995   PMID:16413118   PMID:16778019   PMID:17003038   PMID:17046993   PMID:17189423   PMID:17204322   PMID:17359961   PMID:17664336   PMID:17724343   PMID:17765678   PMID:18001291  
PMID:18166528   PMID:18434600   PMID:18547789   PMID:18662990   PMID:19061864   PMID:19474315   PMID:19956733   PMID:20003423   PMID:20004763   PMID:20223754   PMID:20230794   PMID:20368623  
PMID:20568244   PMID:20943658   PMID:21098570   PMID:21111240   PMID:21147753   PMID:21187406   PMID:21267068   PMID:21300694   PMID:21552007   PMID:21606205   PMID:21640725   PMID:21645620  
PMID:21677750   PMID:21725307   PMID:21873635   PMID:21880782   PMID:22216013   PMID:22364862   PMID:22718342   PMID:22806269   PMID:22841714   PMID:23028652   PMID:23185636   PMID:23195221  
PMID:23386608   PMID:23444373   PMID:23533177   PMID:23704327   PMID:23918928   PMID:23926254   PMID:24161523   PMID:24161848   PMID:24191021   PMID:24210661   PMID:24227724   PMID:24367100  
PMID:24384391   PMID:25208654   PMID:25438880   PMID:25636444   PMID:25742799   PMID:25762570   PMID:26060116   PMID:26083584   PMID:26143639   PMID:26165940   PMID:26371508   PMID:26383973  
PMID:26496195   PMID:26582200   PMID:26595272   PMID:26685160   PMID:27113764   PMID:27118846   PMID:27226319   PMID:27256505   PMID:27436040   PMID:27471260   PMID:27655914   PMID:28028212  
PMID:28055014   PMID:28378742   PMID:28509431   PMID:28619824   PMID:28671696   PMID:28717168   PMID:28768200   PMID:28941984   PMID:29128360   PMID:29180572   PMID:29437892   PMID:29587143  
PMID:30022023   PMID:30026494   PMID:30196744   PMID:30228103   PMID:30236446   PMID:30516471   PMID:30578393   PMID:30630895   PMID:30701202   PMID:31138815   PMID:31436800   PMID:31655624  
PMID:31949138   PMID:32038174   PMID:32325033   PMID:32554809   PMID:32673396   PMID:32873390   PMID:33543287   PMID:33740186   PMID:34042944   PMID:34128978   PMID:34174788   PMID:34255394  
PMID:34433040   PMID:34897463   PMID:35147267   PMID:35449600   PMID:35623357   PMID:35705037   PMID:36292593   PMID:36433959   PMID:36656123   PMID:37172642   PMID:37635409   PMID:37831422  
PMID:37848288   PMID:38048369   PMID:38085152   PMID:38814743   PMID:39366759   PMID:39413783   PMID:39725823   PMID:39868030  


Genomics

Comparative Map Data
Golga2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,178,299 - 32,197,925 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl232,177,396 - 32,197,933 (+)EnsemblGRCm39 Ensembl
GRCm38232,288,287 - 32,307,913 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,287,384 - 32,307,921 (+)EnsemblGRCm38mm10GRCm38
MGSCv37232,143,773 - 32,163,441 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36232,109,393 - 32,129,930 (+)NCBIMGSCv36mm8
Celera231,992,729 - 32,012,412 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
GOLGA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389128,255,829 - 128,276,007 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9128,255,829 - 128,276,026 (-)EnsemblGRCh38hg38GRCh38
GRCh379131,018,108 - 131,038,286 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369130,057,929 - 130,078,089 (-)NCBINCBI36Build 36hg18NCBI36
Build 349128,097,662 - 128,117,822NCBI
Celera9101,669,012 - 101,689,172 (-)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9100,631,562 - 100,651,722 (-)NCBIHuRef
CHM1_19131,169,131 - 131,189,291 (-)NCBICHM1_1
T2T-CHM13v2.09140,462,943 - 140,483,121 (-)NCBIT2T-CHM13v2.0
Golga2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8335,981,783 - 36,002,023 (+)NCBIGRCr8
mRatBN7.2315,583,862 - 15,604,279 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl315,584,039 - 15,604,279 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx318,652,773 - 18,672,989 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0327,237,766 - 27,257,982 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0325,488,516 - 25,508,776 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0311,317,328 - 11,337,569 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl311,317,183 - 11,336,458 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0316,666,198 - 16,686,439 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,412,088 - 11,434,260 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1311,308,459 - 11,330,632 (+)NCBI
Celera310,328,596 - 10,348,889 (+)NCBICelera
Cytogenetic Map3p12NCBI
Golga2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955570782,218 - 799,044 (-)NCBIChiLan1.0ChiLan1.0
GOLGA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21111,077,311 - 11,096,760 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1911,079,657 - 11,099,108 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0999,376,847 - 99,397,128 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19128,045,805 - 128,065,200 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,047,056 - 128,065,137 (-)Ensemblpanpan1.1panPan2
GOLGA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1955,234,836 - 55,251,698 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,429,688 - 54,446,610 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0956,156,848 - 56,173,782 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl956,156,862 - 56,173,777 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1954,916,750 - 54,933,678 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0955,231,389 - 55,248,316 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0955,322,893 - 55,339,826 (+)NCBIUU_Cfam_GSD_1.0
Golga2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947196,030,098 - 196,045,856 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493648715,798,623 - 15,814,360 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GOLGA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11268,702,823 - 268,721,174 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21302,693,900 - 302,710,489 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GOLGA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,852,442 - 9,873,536 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl129,852,461 - 9,873,767 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660796,359,761 - 6,380,755 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Golga2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247606,588,351 - 6,605,518 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Golga2
834 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:3390
Count of miRNA genes:727
Interacting mature miRNAs:965
Transcripts:ENSMUST00000081670, ENSMUST00000100194, ENSMUST00000113377, ENSMUST00000126276, ENSMUST00000127276, ENSMUST00000129193, ENSMUST00000131712, ENSMUST00000133113, ENSMUST00000139494, ENSMUST00000146544, ENSMUST00000147707, ENSMUST00000149141
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552706Cia24_mcollagen induced arthritis QTL 24 (mouse)Not determined22467911533523172Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22702264256396228Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
8552705Cia25_mcollagen induced arthritis 25 (mouse)Not determined22467911533523172Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22459001254890012Mouse
12904008Cfq6_mconditioned fear QTL 6 (mouse)23120303544508204Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22530805156971811Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22112972555129871Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22896112962961129Mouse
12792980Fbmd1_mfemoral bone mineral density 1, females only (mouse)22503449245034492Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21421456748214713Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22368914557689269Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2112972555129871Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse

Markers in Region
AW555139  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38232,307,735 - 32,307,831UniSTSGRCm38
MGSCv37232,163,255 - 32,163,351UniSTSGRCm37
Celera232,012,226 - 32,012,322UniSTS
Cytogenetic Map2BUniSTS
Whitehead/MRC_RH2541.97UniSTS
D2Mit121  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38232,290,657 - 32,290,755UniSTSGRCm38
MGSCv37232,146,177 - 32,146,275UniSTSGRCm37
Celera231,995,133 - 31,995,231UniSTS
Cytogenetic Map2BUniSTS
cM Map218.0UniSTS
Whitehead Genetic223.0UniSTS
Whitehead_YAC2 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001080968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK076370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL808027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB855623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU611518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ698913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000081670   ⟹   ENSMUSP00000080374
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,358 - 32,197,925 (+)Ensembl
GRCm38.p6 Ensembl232,288,346 - 32,307,913 (+)Ensembl
Ensembl Acc Id: ENSMUST00000100194   ⟹   ENSMUSP00000097768
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,325 - 32,197,924 (+)Ensembl
GRCm38.p6 Ensembl232,288,313 - 32,307,912 (+)Ensembl
Ensembl Acc Id: ENSMUST00000113377   ⟹   ENSMUSP00000109004
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,265 - 32,197,933 (+)Ensembl
GRCm38.p6 Ensembl232,288,253 - 32,307,921 (+)Ensembl
Ensembl Acc Id: ENSMUST00000126276
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,187,092 - 32,197,922 (+)Ensembl
GRCm38.p6 Ensembl232,297,080 - 32,307,910 (+)Ensembl
Ensembl Acc Id: ENSMUST00000127276
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,338 - 32,187,265 (+)Ensembl
GRCm38.p6 Ensembl232,288,326 - 32,297,253 (+)Ensembl
Ensembl Acc Id: ENSMUST00000129193   ⟹   ENSMUSP00000115003
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,367 - 32,192,212 (+)Ensembl
GRCm38.p6 Ensembl232,288,355 - 32,302,200 (+)Ensembl
Ensembl Acc Id: ENSMUST00000131712   ⟹   ENSMUSP00000114169
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,345 - 32,192,971 (+)Ensembl
GRCm38.p6 Ensembl232,288,333 - 32,302,959 (+)Ensembl
Ensembl Acc Id: ENSMUST00000139494   ⟹   ENSMUSP00000117476
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,177,396 - 32,187,788 (+)Ensembl
GRCm38.p6 Ensembl232,287,384 - 32,297,776 (+)Ensembl
Ensembl Acc Id: ENSMUST00000146544
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,191,224 - 32,192,961 (+)Ensembl
GRCm38.p6 Ensembl232,301,212 - 32,302,949 (+)Ensembl
Ensembl Acc Id: ENSMUST00000147707   ⟹   ENSMUSP00000121886
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,363 - 32,189,322 (+)Ensembl
GRCm38.p6 Ensembl232,288,351 - 32,299,310 (+)Ensembl
Ensembl Acc Id: ENSMUST00000149141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,188,801 - 32,189,283 (+)Ensembl
GRCm38.p6 Ensembl232,298,789 - 32,299,271 (+)Ensembl
Ensembl Acc Id: ENSMUST00000239447   ⟹   ENSMUSP00000159316
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,265 - 32,197,933 (+)Ensembl
GRCm38.p6 Ensembl232,288,253 - 32,307,921 (+)Ensembl
Ensembl Acc Id: ENSMUST00000239474   ⟹   ENSMUSP00000159347
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,178,265 - 32,197,933 (+)Ensembl
GRCm38.p6 Ensembl232,288,253 - 32,307,921 (+)Ensembl
RefSeq Acc Id: NM_001080968   ⟹   NP_001074437
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,178,338 - 32,197,925 (+)NCBI
GRCm38232,288,326 - 32,307,913 (+)NCBI
MGSCv37232,143,773 - 32,163,441 (+)RGD
Celera231,992,729 - 32,012,412 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001362695   ⟹   NP_001349624
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,178,338 - 32,197,925 (+)NCBI
GRCm38232,288,326 - 32,307,913 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001362696   ⟹   NP_001349625
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,178,338 - 32,197,925 (+)NCBI
GRCm38232,288,326 - 32,307,913 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001362697   ⟹   NP_001349626
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,178,338 - 32,197,925 (+)NCBI
GRCm38232,288,326 - 32,307,913 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001362698   ⟹   NP_001349627
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,178,338 - 32,197,925 (+)NCBI
GRCm38232,288,326 - 32,307,913 (+)NCBI
Sequence:
RefSeq Acc Id: NM_133852   ⟹   NP_598613
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,178,338 - 32,197,925 (+)NCBI
GRCm38232,288,326 - 32,307,913 (+)NCBI
MGSCv37232,143,773 - 32,163,441 (+)RGD
Celera231,992,729 - 32,012,412 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006498491   ⟹   XP_006498554
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,178,299 - 32,197,413 (+)NCBI
GRCm38232,288,287 - 32,307,401 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017319359   ⟹   XP_017174848
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,178,299 - 32,197,413 (+)NCBI
GRCm38232,288,287 - 32,307,401 (+)NCBI
Sequence:
RefSeq Acc Id: NP_598613   ⟸   NM_133852
- Peptide Label: isoform a
- UniProtKB: E9PUQ5 (UniProtKB/TrEMBL),   Q5DTL1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001074437   ⟸   NM_001080968
- Peptide Label: isoform b
- UniProtKB: Q921M4 (UniProtKB/Swiss-Prot),   A2AN47 (UniProtKB/Swiss-Prot),   A2AN43 (UniProtKB/Swiss-Prot),   A0A6I8MWY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498554   ⟸   XM_006498491
- Peptide Label: isoform X2
- UniProtKB: A0A6I8MX07 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017174848   ⟸   XM_017319359
- Peptide Label: isoform X1
- UniProtKB: Q921M4 (UniProtKB/Swiss-Prot),   A2AN47 (UniProtKB/Swiss-Prot),   A2AN43 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001349624   ⟸   NM_001362695
- Peptide Label: isoform c
- UniProtKB: Q5DTL1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001349625   ⟸   NM_001362696
- Peptide Label: isoform d
- UniProtKB: Q921M4 (UniProtKB/Swiss-Prot),   A2AN47 (UniProtKB/Swiss-Prot),   A2AN43 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001349626   ⟸   NM_001362697
- Peptide Label: isoform e
- UniProtKB: Q921M4 (UniProtKB/Swiss-Prot),   A2AN47 (UniProtKB/Swiss-Prot),   A2AN43 (UniProtKB/Swiss-Prot),   Z4YJU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001349627   ⟸   NM_001362698
- Peptide Label: isoform f
- UniProtKB: Q921M4 (UniProtKB/Swiss-Prot),   A2AN47 (UniProtKB/Swiss-Prot),   A2AN43 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000117476   ⟸   ENSMUST00000139494
Ensembl Acc Id: ENSMUSP00000109004   ⟸   ENSMUST00000113377
Ensembl Acc Id: ENSMUSP00000121886   ⟸   ENSMUST00000147707
Ensembl Acc Id: ENSMUSP00000159347   ⟸   ENSMUST00000239474
Ensembl Acc Id: ENSMUSP00000159316   ⟸   ENSMUST00000239447
Ensembl Acc Id: ENSMUSP00000114169   ⟸   ENSMUST00000131712
Ensembl Acc Id: ENSMUSP00000115003   ⟸   ENSMUST00000129193
Ensembl Acc Id: ENSMUSP00000080374   ⟸   ENSMUST00000081670
Ensembl Acc Id: ENSMUSP00000097768   ⟸   ENSMUST00000100194
Protein Domains
Golgin subfamily A conserved

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q921M4-F1-model_v2 AlphaFold Q921M4 1-999 view protein structure

Promoters
RGD ID:6831517
Promoter ID:MM_KWN:28684
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day4,   ES_Cell,   MEF_B6
Transcripts:OTTMUST00000031191
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,142,196 - 32,142,696 (+)MPROMDB
RGD ID:6830596
Promoter ID:MM_KWN:28685
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000081670,   ENSMUST00000113375,   ENSMUST00000113386,   ENSMUST00000113397,   NM_001080968,   NM_133852,   OTTMUST00000031176,   OTTMUST00000031177,   OTTMUST00000031179,   OTTMUST00000031180,   OTTMUST00000031192,   OTTMUST00000031193,   OTTMUST00000031194,   OTTMUST00000031195,   OTTMUST00000031196
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,143,076 - 32,144,387 (-)MPROMDB
RGD ID:6831521
Promoter ID:MM_KWN:28687
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000031197
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,154,516 - 32,155,016 (+)MPROMDB
RGD ID:6876986
Promoter ID:EPDNEW_M1944
Type:multiple initiation site
Name:Golga2_1
Description:Mus musculus golgi autoantigen, golgin subfamily a, 2 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38232,288,335 - 32,288,395EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2139395 AgrOrtholog
Ensembl Genes ENSMUSG00000002546 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000081670 ENTREZGENE
  ENSMUST00000081670.14 UniProtKB/TrEMBL
  ENSMUST00000100194 ENTREZGENE
  ENSMUST00000100194.10 UniProtKB/TrEMBL
  ENSMUST00000113377.8 UniProtKB/Swiss-Prot
  ENSMUST00000129193.3 UniProtKB/TrEMBL
  ENSMUST00000131712.9 UniProtKB/TrEMBL
  ENSMUST00000139494.8 UniProtKB/TrEMBL
  ENSMUST00000147707.8 UniProtKB/TrEMBL
  ENSMUST00000239447 ENTREZGENE
  ENSMUST00000239447.2 UniProtKB/TrEMBL
  ENSMUST00000239474.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.1700 UniProtKB/TrEMBL
InterPro GM130_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GOLGA_cons_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Golgin_A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:99412 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2139395 ENTREZGENE
NCBI Gene 99412 ENTREZGENE
PANTHER GOLGIN SUBFAMILY A MEMBER 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10881 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GM130_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GOLGA2L5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB GOLGA2 RGD
PhenoGen Golga2 PhenoGen
UniProt A0A6I8MWY5 ENTREZGENE, UniProtKB/TrEMBL
  A0A6I8MX07 ENTREZGENE, UniProtKB/TrEMBL
  A2AN42_MOUSE UniProtKB/TrEMBL
  A2AN43 ENTREZGENE
  A2AN45_MOUSE UniProtKB/TrEMBL
  A2AN46_MOUSE UniProtKB/TrEMBL
  A2AN47 ENTREZGENE
  A2AN48_MOUSE UniProtKB/TrEMBL
  E9PUQ5 ENTREZGENE, UniProtKB/TrEMBL
  GOGA2_MOUSE UniProtKB/Swiss-Prot
  Q5DTL1 ENTREZGENE, UniProtKB/TrEMBL
  Q921M4 ENTREZGENE
  Z4YJU8 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A2AN43 UniProtKB/Swiss-Prot
  A2AN47 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-04-18 Golga2  golgin A2  Golga2  golgi autoantigen, golgin subfamily a, 2  Symbol and/or name change 5135510 APPROVED