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Gene: Snap23 (synaptosomal-associated protein 23) Mus musculus

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Symbol:

Snap23

Name:

synaptosomal-associated protein 23

RGD ID:

732152

MGI Page

MGI

Description:

Predicted to enable SNAP receptor activity and syntaxin binding activity. Acts upstream of or within exocytosis. Located in cytoplasmic vesicle and plasma membrane. Part of SNARE complex. Is expressed in cerebral cortex ventricular layer; cortical plate; and testis. Orthologous to human SNAP23 (synaptosome associated protein 23).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

23kDa; AA408749; Sn; SNA; SNAP-23; Sndt; synaptosomal-associated protein, 23kD; Synd; Syndet; vesicle-membrane fusion protein SNAP-23

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SNAP23 (synaptosome associated protein 23)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Snap23 (synaptosome associated protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Snap23 (synaptosome associated protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SNAP23 (synaptosome associated protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SNAP23 (synaptosome associated protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Snap23 (synaptosome associated protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SNAP23 (synaptosome associated protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SNAP23 (synaptosome associated protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Snap23 (synaptosome associated protein 23)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Snap23 (synaptosome associated protein 23)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	SNAP23 (synaptosome associated protein 23)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	snap23.2 (synaptosome associated protein 23.2)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Danio rerio (zebrafish):	snap23.1 (synaptosome associated protein 23.1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ric-4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Snap24	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	Snap25	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	SEC9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	snap23	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Related Pseudogenes:

Gm6615

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	120,398,137 - 120,436,829 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	120,398,152 - 120,431,736 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	120,567,655 - 120,601,255 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	120,567,671 - 120,601,255 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	120,393,407 - 120,426,458 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	120,259,112 - 120,292,163 (+)	NCBI		MGSCv36	mm8
Celera	2	121,720,414 - 121,753,492 (+)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	60.37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

Experimental Liver Cirrhosis (ISO)

Myocardial Ischemia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

1-naphthyl isothiocyanate (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (ISO)

2,6-dimethoxyphenol (ISO)

2,6-dinitrotoluene (ISO)

2-hydroxypropanoic acid (ISO)

3,3',4,4',5-pentachlorobiphenyl (ISO)

3H-1,2-dithiole-3-thione (ISO)

4,4'-diaminodiphenylmethane (ISO)

6-propyl-2-thiouracil (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (ISO)

antirheumatic drug (ISO)

Aroclor 1254 (EXP)

benzo[a]pyrene (EXP,ISO)

benzo[b]fluoranthene (EXP)

Benzo[ghi]perylene (EXP)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (ISO)

bisphenol F (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

chrysene (EXP)

copper(II) sulfate (ISO)

coumestrol (ISO)

crocidolite asbestos (EXP)

cyclosporin A (ISO)

disodium selenite (ISO)

dorsomorphin (ISO)

ethanol (ISO)

finasteride (ISO)

flutamide (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

furfural (ISO)

graphite (ISO)

hexadecanoic acid (ISO)

hydrogen peroxide (ISO)

ivermectin (ISO)

leflunomide (ISO)

methimazole (ISO)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-methyl-4-phenylpyridinium (ISO)

N-nitrosodimethylamine (ISO)

nicotinamide (ISO)

nitrates (EXP)

oleic acid (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (ISO)

phenylmercury acetate (ISO)

pirinixic acid (EXP)

progesterone (EXP)

rac-lactic acid (ISO)

resveratrol (EXP,ISO)

SB 431542 (ISO)

Se-methyl-L-selenocysteine (ISO)

Se-methylselenocysteine (ISO)

sodium arsenate (EXP)

sodium arsenite (ISO)

sodium chloride (ISO)

streptozocin (ISO)

succimer (ISO)

sunitinib (ISO)

tert-butyl hydroperoxide (ISO)

tetraphene (EXP)

theophylline (ISO)

thioacetamide (ISO)

titanium dioxide (EXP)

trichostatin A (ISO)

triptonide (EXP)

troglitazone (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ISO)

exocytosis (IBA,IMP)

histamine secretion by mast cell (ISO)

membrane fusion (ISO)

protein transport (IEA)

protein-containing complex assembly (ISO)

regulation of exocytosis (ISO)

synaptic vesicle fusion to presynaptic active zone membrane (IBA)

synaptic vesicle priming (IBA)

vesicle-mediated transport (ISO)

vesicle-mediated transport in synapse (ISO)

Cellular Component

adherens junction (ISO)

azurophil granule (ISO)

cilium (ISO)

cytoplasm (ISO)

cytoplasmic vesicle (IDA)

GABA-ergic synapse (ISO)

glutamatergic synapse (ISO)

mitochondrion (ISO)

neuron projection (IEA)

nucleoplasm (ISO)

plasma membrane (IBA,IDA,ISO,TAS)

postsynapse (ISO)

SNARE complex (IBA,IDA,ISO)

specific granule (ISO)

synapse (IEA)

Molecular Function

protein binding (IPI,ISO)

SNAP receptor activity (IBA,ISO)

syntaxin binding (IBA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

insulin responsive facilitative sugar transporter mediated glucose transport pathway (ISO)

vasopressin signaling pathway (ISO)

vasopressin signaling pathway via receptor type 2 (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal blastocyst morphology (IAGP)

abnormal coat/hair pigmentation (IEA)

embryonic lethality before implantation, complete penetrance (IAGP)

embryonic lethality prior to organogenesis (IEA)

increased startle reflex (IEA)

preweaning lethality, complete penetrance (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Physiology and pathophysiology of the vasopressin-regulated renal water reabsorption.	Boone M and Deen PM, Pflugers Arch. 2008 Sep;456(6):1005-24. Epub 2008 Apr 23.
2.	The GLUT4 code.	Larance M, etal., Mol Endocrinol. 2008 Feb;22(2):226-33. Epub 2007 Aug 23.
3.	MGDs mouse GO annotations	MGD data from the GO Consortium
4.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Insulin action on glucose transporters through molecular switches, tracks and tethers.	Zaid H, etal., Biochem J. 2008 Jul 15;413(2):201-15.

Additional References at PubMed

PMID:9067602	PMID:9168999	PMID:9639508	PMID:10349636	PMID:10379359	PMID:10394363	PMID:10479478	PMID:10773458	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851
PMID:11507212	PMID:11544199	PMID:11741941	PMID:11753414	PMID:12376543	PMID:12466851	PMID:12477932	PMID:12551899	PMID:12832401	PMID:12859899	PMID:12904583	PMID:14610273
PMID:14729942	PMID:14742706	PMID:15154671	PMID:15363411	PMID:15489334	PMID:15542596	PMID:16141072	PMID:16141073	PMID:17001002	PMID:18505797	PMID:18535671	PMID:18692471
PMID:18799693	PMID:19274433	PMID:19524684	PMID:20006577	PMID:20118925	PMID:21479242	PMID:21586284	PMID:21656854	PMID:21677750	PMID:21873635	PMID:23064108	PMID:23087210
PMID:23269646	PMID:23395379	PMID:23549422	PMID:23613522	PMID:23960234	PMID:24040030	PMID:24194600	PMID:24357721	PMID:24469400	PMID:24705552	PMID:24744148	PMID:25422940
PMID:25706117	PMID:26182382	PMID:26198635	PMID:26266817	PMID:27697926	PMID:28067230	PMID:28378742	PMID:28716920	PMID:29762713	PMID:29771640	PMID:30102258	PMID:30573565
PMID:30811271	PMID:31757226	PMID:32325033	PMID:33332551	PMID:33837726	PMID:33973520	PMID:34321999	PMID:35816155	PMID:37168570	PMID:38182732	PMID:38355793

Genomics

Comparative Map Data

Snap23
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	120,398,137 - 120,436,829 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	120,398,152 - 120,431,736 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	120,567,655 - 120,601,255 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	120,567,671 - 120,601,255 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	120,393,407 - 120,426,458 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	120,259,112 - 120,292,163 (+)	NCBI		MGSCv36	mm8
Celera	2	121,720,414 - 121,753,492 (+)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	60.37	NCBI

SNAP23
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	42,491,129 - 42,533,058 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	42,491,233 - 42,545,356 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	42,787,832 - 42,825,256 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	40,575,127 - 40,612,548 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	19,555,540 - 19,592,958 (+)	NCBI		Celera
Cytogenetic Map	15	q15.1-q15.2	NCBI
HuRef	15	19,635,345 - 19,673,071 (+)	NCBI		HuRef
CHM1_1	15	42,905,940 - 42,943,698 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	40,297,171 - 40,339,102 (+)	NCBI		T2T-CHM13v2.0

Snap23
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	127,966,184 - 127,999,929 (+)	NCBI		GRCr8
mRatBN7.2	3	107,514,088 - 107,546,177 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	107,514,131 - 107,544,320 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	111,188,811 - 111,219,120 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	119,784,379 - 119,814,692 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	117,444,773 - 117,475,086 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	112,333,972 - 112,362,960 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	3	118,880,898 - 118,909,856 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	107,361,066 - 107,362,878 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	106,422,362 - 106,451,900 (+)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

Snap23
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	9,190,623 - 9,225,103 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	9,191,123 - 9,225,103 (+)	NCBI	ChiLan1.0	ChiLan1.0

SNAP23
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	31,741,494 - 31,783,820 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	35,898,461 - 35,940,783 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	21,456,247 - 21,494,340 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	39,608,479 - 39,650,759 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	39,612,445 - 39,650,759 (+)	Ensembl	panpan1.1		panPan2

SNAP23
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	9,453,931 - 9,493,506 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	9,456,084 - 9,492,329 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	9,511,812 - 9,550,895 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	9,589,363 - 9,628,453 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	9,591,559 - 9,629,150 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	9,508,701 - 9,547,616 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	9,615,029 - 9,654,170 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	9,747,912 - 9,786,884 (+)	NCBI		UU_Cfam_GSD_1.0

Snap23
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	87,932,868 - 87,970,585 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	5,784,054 - 5,820,571 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	5,784,070 - 5,818,644 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SNAP23
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	128,847,931 - 128,888,947 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	128,849,465 - 128,888,972 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	143,742,362 - 143,781,715 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SNAP23
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	40,443,478 - 40,485,211 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	40,442,615 - 40,482,346 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	100,526,825 - 100,568,648 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Snap23
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624804	9,610,308 - 9,641,933 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624804	9,609,777 - 9,643,670 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Snap23
1820 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	4121
Count of miRNA genes:	747
Interacting mature miRNAs:	970
Transcripts:	ENSMUST00000028743, ENSMUST00000110711, ENSMUST00000116437, ENSMUST00000130759, ENSMUST00000137144, ENSMUST00000142278, ENSMUST00000147864, ENSMUST00000150611, ENSMUST00000153580
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301905	Lgth2_m	body length 2 (mouse)			Not determined		2	111173704	145173821	Mouse
1302033	Nsv1_m	Neuroadapted Sindbis viral RNA level 1 (mouse)			Not determined		2	111623386	145623526	Mouse
12904007	Cfq7_m	conditioned fear QTL 7 (mouse)					2	118356772	125048872	Mouse
13506762	Tbvq2_m	trabecular bone volume QTL 2 (mouse)					2	115430481	124741920	Mouse
13824983	Vclq1_m	curvilinear velocity QTL 1 (mouse)					2	61830344	136841920	Mouse
1301909	Smdq2_m	segregation of mitochondrial DNA QTL 2 (mouse)			Not determined		2	92778465	126778607	Mouse
11039520	Ltpr2h_m	Leishmania tropica response 2h (mouse)					2	112212746	146213005	Mouse
11039521	Ltpr2g_m	Leishmania tropica response 2g (mouse)					2	115212857	149212994	Mouse
12910799	Pwgrq2_m	pre-weaning growth rate QTL 2 (mouse)					2	118589253	160611165	Mouse
1302174	Dssc2_m	dextran sodium sulfate induced colitis QTL2 (mouse)			Not determined		2	24224632	148700377	Mouse
12910795	Pwbwq5_m	post-weaning body weight QTL 5 (mouse)					2	118589253	160611165	Mouse
11532731	Sluc31a_m	susceptibility to lung cancer 31a (mouse)					2	88015003	122015170	Mouse
27226761	Feml18_m	femur length 18, 16 week (mouse)					2	94230345	154241920	Mouse
12910812	Pwgrq1_m	pre-weaning growth rate QTL 1 (mouse)					2	118589253	160611165	Mouse
12910814	Pwbwq1_m	pre-weaning body weight QTL 1 (mouse)					2	118589253	160611165	Mouse
4141854	T2dm2sa_m	type 2 diabetes mellitus 2 in SMXA RI mice (mouse)			Not determined		2	29307947	148374934	Mouse
12904935	Edlmmq2_m	extensor digitorum longus muscle mass QTL 2 (mouse)					2	97210364	131210364	Mouse
1302071	Fembrs1_m	femur breaking strength 1 (mouse)			Not determined		2	100942930	134943090	Mouse
10045885	Cplaq15_m	circadian period of locomotor activity 15 (mouse)			Not determined		2	110916118	154354667	Mouse
1302203	Gvhd3_m	graft-versus host disease 3 (mouse)			Not determined		2	100942930	134943090	Mouse
1300793	Pcfm2_m	periosteal circumference and femur length 2 (mouse)			Not determined		2	111173704	145173821	Mouse
10412082	Hylaq1_m	Hyperlocomotor activity related QTL 1 (mouse)			Not determined		2	84013198	148667470	Mouse
1300798	Actre3_m	activity response to ethanol 3 (mouse)			Not determined		2	112024987	128173821	Mouse
5491197	Mobq5_m	multigenic obesity QTL 5 (mouse)			Not determined		2	65269746	162518926	Mouse
5491196	Mobq6_m	multigenic obesity QTL 6 (mouse)			Not determined		2	85724269	180896594	Mouse
4142223	Femwf4_m	femur work to failure 4 (mouse)			Not determined			88143423	122143570	Mouse
1301415	Actre4_m	activity response to ethanol 4 (mouse)			Not determined		2	112024987	128173821	Mouse
1301029	T2dm3_m	type 2 diabetes mellitus 3 (mouse)			Not determined		2	114288075	132714157	Mouse
27226788	Feml13_m	femur length 13, 10 week (mouse)					2	102630345	159941920	Mouse
1301295	Prdt1_m	prion disease incubation time 1 (mouse)			Not determined		2	116077623	150077741	Mouse
12904954	Gmmq2_m	gastrocnemius muscle mass QTL 2 (mouse)					2	97210364	131210364	Mouse
1558825	Aabpr_m	aberrant activation of B cell proliferation (mouse)			Not determined		2	116033229	122207534	Mouse
11038696	Ltpr2f_m	Leishmania tropica response 2f (mouse)					2	115212857	149212994	Mouse
1301330	Tbbmd2_m	total body bone mineral density 2 (mouse)			Not determined		2	100942930	134943090	Mouse
1301201	Chab1_m	cholesterol absorption 1 (mouse)			Not determined		2	111551028	145551163	Mouse
11038699	Ltpr2b_m	Leishmania tropica response 2b (mouse)					2	112212746	146213005	Mouse
11038700	Ltpr2a_m	Leishmania tropica response 2a (mouse)					2	112212746	146213005	Mouse
11038702	Ltpr2_m	Leishmania tropica response 2 (mouse)					2	103095716	167212356	Mouse
11049568	Lmr28c_m	leishmaniasis resistance 28c (mouse)					2	97123370	131123532	Mouse
11049569	Lmr28d_m	leishmaniasis resistance 28d (mouse)					2	97123370	131123532	Mouse
11528549	Sluc31_m	susceptibility to lung cancer 31 (mouse)					2	74524117	129213005	Mouse
1301087	Bbaa15_m	B.burgdorferi-associated arthritis 15 (mouse)			Not determined		2	110489658	144489807	Mouse
1301825	Pbrgcsf1_m	peripheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)			Not determined		2	106233580	140233729	Mouse
4141802	Ignpq1_m	IgA nephropathy QTL 1 (mouse)			Not determined		2	100824060	134824269	Mouse
1301834	Bits1_m	bitterness sensitivity 1 (mouse)			Not determined		2	87440643	121440778	Mouse
1558990	Skmw9_m	skeletal muscle weight 9 (mouse)			Not determined		2	111173704	145173821	Mouse
11041906	Lmr28a_m	leishmaniasis resistance 28a (mouse)					2	103095716	129213005	Mouse
4141155	Plast2b_m	plasma plant sterol 2b (mouse)			Not determined		2	84013198	148522175	Mouse
1301618	Bglu1_m	blood glucose level 1 (mouse)			Not determined		2	117942930	174324863	Mouse
1301755	Hrq1_m	heart rate quantitative locus 1 (mouse)			Not determined		2	111173704	145173821	Mouse
1301344	Lith1_m	lithogenic gene 1 (mouse)			Not determined		2	45347635	145312647	Mouse
1558881	Ses7_m	salmonella enteritidis susceptibility 7 (mouse)			Not determined		2	116306330	150306474	Mouse
1301098	Cd8mts3_m	CD8 memory T cell subset 3 (mouse)			Not determined		2	91089974	125090104	Mouse
10043875	Bw25_m	body weight QTL 25 (mouse)			Not determined		2	107255676	141255676	Mouse

Markers in Region

RH125815

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	2	120,600,229 - 120,600,429	UniSTS	GRCm38
MGSCv37	2	120,425,965 - 120,426,165	UniSTS	GRCm37
Celera	2	121,752,999 - 121,753,199	UniSTS
Cytogenetic Map	2	E5	UniSTS
cM Map	2	61.8	UniSTS
Whitehead/MRC_RH	2	1522.51	UniSTS

RH135476

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	2	E5	UniSTS
cM Map	2	61.8	UniSTS

D2Dcr29

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	2	120,574,683 - 120,574,969	UniSTS	GRCm38
MGSCv37	2	120,400,419 - 120,400,705	UniSTS	GRCm37
Celera	2	121,727,423 - 121,727,709	UniSTS
Cytogenetic Map	2	E5	UniSTS
cM Map	2	67.35	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001177792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001177793	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001412633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_009222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_182010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_182011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_182012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_182013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_182014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_182015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_182016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006499054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006499056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB000822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB007444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF007169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AH009007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK017311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK019162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL772299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC070456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U73143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000028743 ⟹ ENSMUSP00000028743

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,398,172 - 120,431,736 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,567,691 - 120,601,255 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000110711 ⟹ ENSMUSP00000106339

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,398,152 - 120,431,736 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,567,671 - 120,601,255 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000116437 ⟹ ENSMUSP00000112138

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,398,178 - 120,431,736 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,567,697 - 120,601,255 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000130759

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,420,995 - 120,427,268 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,590,514 - 120,596,787 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000137144

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,416,722 - 120,425,905 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,586,241 - 120,595,424 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000142278 ⟹ ENSMUSP00000116935

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,398,219 - 120,427,186 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,567,738 - 120,596,705 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000147864

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,398,204 - 120,415,456 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,567,723 - 120,584,975 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000150611 ⟹ ENSMUSP00000119652

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,398,202 - 120,427,273 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,567,721 - 120,596,792 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000153580 ⟹ ENSMUSP00000121509

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	120,398,204 - 120,416,748 (+)	Ensembl
GRCm38.p6 Ensembl	2	120,567,723 - 120,586,267 (+)	Ensembl

RefSeq Acc Id:

NM_001177792 ⟹ NP_001171263

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI
GRCm38	2	120,567,671 - 120,600,722 (+)	NCBI
MGSCv37	2	120,393,407 - 120,426,458 (+)	RGD
Celera	2	121,720,414 - 121,753,492 (+)	RGD
cM Map	2		ENTREZGENE

Sequence:

show sequence

GGGCGCATGCGCGCGAGGGAGCGCGCACCCTGTCCGATCTTCTAGAGTCCGAGAACTGTGGAGG
CTGGAGAGGAGTGGCCGGAGCCGCCGGGTGAGGCTTCTGGAAAGTAGCTGAGGGAACTAGTCAG
CGGGACAGAGTATCCGTATTTCTGTGCCCAGCAGTGTGACGACTCACCATGGATAATCTGTCCC
CAGAGGAAGTTCAGCTGCGGGCTCACCAGGTTACTGATGAGTCTCTGGAAAGCACAAGGAGAAT
CCTGGGTTTAGCCATTGAGTCTCAGGATGCAGGAATCAAGACCATCACTATGCTGGATGAGCAA
GGGGAACAACTAAATCGCATAGAAGAAGGCATGGACCAAATAAATAAAGACATGAGAGAGGCAG
AGAAGACTTTAACAGAACTCAACAAGTGTTGTGGCCTCTGCATCTGCCCTTGTAATAGATTCTC
AGTTGGTGACTGTTTCTTTGAAACCAGGACAAAGAACTTTGAGTCTGGAAAGAACTATAAGGCA
ACATGGGGAGATGGTGGCGACAACTCACCTAGCAATGTAGTATCTAAGCAACCGAGCCGGATTA
CAAATGGTCAGCCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAA
TGATGCCAGAGAAGATGAGATGGAAGAGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTA
AAGAACATGGCTCTGGATATGGGCAATGAAATTGATGCTCAAAACCAGCAAATACAGAAGATCA
CAGAAAAGGCTGACACCAACAAGAATCGTATTGACATTGCCAATACAAGAGCAAAGAAACTCAT
TGATAGTTAAAGCCCTGCTGTACTTCTTTACCTGTTAACTCAGTTCTCTAGCTCCGCTGAGTCA
TTTCTTATTCAGAGTTTGAAAGGCTGTGAGAAGGAGCAGAGGAGGAATGCCTCGCTACTTTCTT
ACTTTGTCTTTAGGGGGTAGGTTCTTGCTCAGGCTTCCTTACAGTCTTTCTCAGTCACTCTCAT
AGGCTTCTTTCCATACATCACCGTCTCTTCATCTCTTCATTTAGCTTCTTTTGCGTTCAAGATT
TGGAAGCATTGCCAAAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATTGGTA
TTGGTTGGTTGGTTTGGTTTTGGTTTTGTGGTAAAGAGCAAGAGGAAGGAATAGGAAATGAAGC
TGACTCATTAAAGAAACTACAGGTCACAAAAACACAGACGAGTGCTTGGGGTGGGAGCTTTCAC
ACATGTGTTTTGTTCTGCATCACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTT
TCTAGAAGTGAGCTTCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTTGGAT
CCAGTTTCATATTGCACATGCAGGAACATTATATAAATGAGTGCCTTTTATTCTCACACAATGA
GTCATGGCATGGTCCCATTGTAGGCCTGTTAACTTCATGAAGTTGACGGTAGCCTTTAAAAGAT
ACACACACACACACACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACTTTTAC
AGTGTATCATGTGAATTCAGATTTACCTCAATACTAAGAATTATGTTTAGATATGAAAAAAACT
TGTTTTGATCTCAGGTAGAAAAATAGATTGCTTTGAGTTTTGTGTAGTTTTAAACATTTAAAAA
GTCATAATTTGTTACTAAAAGTTGTTTGGAAAATTATGCCTTTATATTAATTATTGATGACCGC
ACTGCCATTCTCTCTGCCTTATGCACAGAATCAAGTTTATGTAGATCCTGAAGTGTTAGGGAAG
CTGAAATGGTATTTGTCACATTTGTTTAAAAATTAGCATCTGTACACTTTAGAGCTACTAAAGT
AGACTGGTTTCACCAATAACCATTGCTTTATTCTTACAATTAAATTTTATAATTAATGATATTG
TTCTTTCAAATAGGTAATGTTTCTATGACTTATTTGTGGGGGCAATCATTTTATCAGCTTCTGT
TGACATTAAATAAAGCAAATGTCCATACATCAAGCACTCCAATAGAAAGCTGTATTAGCTCTCT
TCTAATTTTTAGCAGAAGTGTTTACAGGAGTTTCTATGGTTTGCTATGAGTCCATTCTAGACAT
TATCTTAGTCATTTGTACTTAAATACACTACTGAGTATTTCTGAGTG

hide sequence

RefSeq Acc Id:

NM_001177793 ⟹ NP_001171264

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI
GRCm38	2	120,567,671 - 120,600,722 (+)	NCBI
MGSCv37	2	120,393,407 - 120,426,458 (+)	RGD
Celera	2	121,720,414 - 121,753,492 (+)	RGD
cM Map	2		ENTREZGENE

Sequence:

show sequence

GGGCGCATGCGCGCGAGGGAGCGCGCACCCTGTCCGATCTTCTAGAGTCCGAGAACTGTGGAGG
CTGGAGAGGAGTGGCCGGAGCCGCCGGAGTATCCGTATTTCTGTGCCCAGCAGTGTGACGACTC
ACCATGGATAATCTGTCCCCAGAGGAAGTTCAGCTGCGGGCTCACCAGGTTACTGATGAGTCTC
TGGAAAGCACAAGGAGAATCCTGGGTTTAGCCATTGAGTCTCAGGATGCAGGAATCAAGACCAT
CACTATGCTGGATGAGCAAGGGGAACAACTAAATCGCATAGAAGAAGGCATGGACCAAATAAAT
AAAGACATGAGAGAGGCAGAGAAGACTTTAACAGAACTCAACAAGTGTTGTGGCCTCTGCATCT
GCCCTTGTAATAGGACAAAGAACTTTGAGTCTGGAAAGAACTATAAGGCAACATGGGGAGATGG
TGGCGACAACTCACCTAGCAATGTAGTATCTAAGCAACCGAGCCGGATTACAAATGGTCAGCCT
CAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAATGATGCCAGAGAAG
ATGAGATGGAAGAGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGAACATGGCTCT
GGATATGGGCAATGAAATTGATGCTCAAAACCAGCAAATACAGAAGATCACAGAAAAGGCTGAC
ACCAACAAGAATCGTATTGACATTGCCAATACAAGAGCAAAGAAACTCATTGATAGTTAAAGCC
CTGCTGTACTTCTTTACCTGTTAACTCAGTTCTCTAGCTCCGCTGAGTCATTTCTTATTCAGAG
TTTGAAAGGCTGTGAGAAGGAGCAGAGGAGGAATGCCTCGCTACTTTCTTACTTTGTCTTTAGG
GGGTAGGTTCTTGCTCAGGCTTCCTTACAGTCTTTCTCAGTCACTCTCATAGGCTTCTTTCCAT
ACATCACCGTCTCTTCATCTCTTCATTTAGCTTCTTTTGCGTTCAAGATTTGGAAGCATTGCCA
AAGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATTGGTATTGGTTGGTTGGTT
TGGTTTTGGTTTTGTGGTAAAGAGCAAGAGGAAGGAATAGGAAATGAAGCTGACTCATTAAAGA
AACTACAGGTCACAAAAACACAGACGAGTGCTTGGGGTGGGAGCTTTCACACATGTGTTTTGTT
CTGCATCACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCT
TCACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTTGGATCCAGTTTCATATTG
CACATGCAGGAACATTATATAAATGAGTGCCTTTTATTCTCACACAATGAGTCATGGCATGGTC
CCATTGTAGGCCTGTTAACTTCATGAAGTTGACGGTAGCCTTTAAAAGATACACACACACACAC
ACACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACTTTTACAGTGTATCATGTGA
ATTCAGATTTACCTCAATACTAAGAATTATGTTTAGATATGAAAAAAACTTGTTTTGATCTCAG
GTAGAAAAATAGATTGCTTTGAGTTTTGTGTAGTTTTAAACATTTAAAAAGTCATAATTTGTTA
CTAAAAGTTGTTTGGAAAATTATGCCTTTATATTAATTATTGATGACCGCACTGCCATTCTCTC
TGCCTTATGCACAGAATCAAGTTTATGTAGATCCTGAAGTGTTAGGGAAGCTGAAATGGTATTT
GTCACATTTGTTTAAAAATTAGCATCTGTACACTTTAGAGCTACTAAAGTAGACTGGTTTCACC
AATAACCATTGCTTTATTCTTACAATTAAATTTTATAATTAATGATATTGTTCTTTCAAATAGG
TAATGTTTCTATGACTTATTTGTGGGGGCAATCATTTTATCAGCTTCTGTTGACATTAAATAAA
GCAAATGTCCATACATCAAGCACTCCAATAGAAAGCTGTATTAGCTCTCTTCTAATTTTTAGCA
GAAGTGTTTACAGGAGTTTCTATGGTTTGCTATGAGTCCATTCTAGACATTATCTTAGTCATTT
GTACTTAAATACACTACTGAGTATTTCTGAGTG

hide sequence

RefSeq Acc Id:

NM_001412626 ⟹ NP_001399555

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NM_001412627 ⟹ NP_001399556

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NM_001412628 ⟹ NP_001399557

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,436,829 (+)	NCBI

RefSeq Acc Id:

NM_001412629 ⟹ NP_001399558

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NM_001412630 ⟹ NP_001399559

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,436,829 (+)	NCBI

RefSeq Acc Id:

NM_001412631 ⟹ NP_001399560

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NM_001412632 ⟹ NP_001399561

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NM_001412633 ⟹ NP_001399562

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NM_009222 ⟹ NP_033248

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI
GRCm38	2	120,567,671 - 120,600,722 (+)	NCBI
MGSCv37	2	120,393,407 - 120,426,458 (+)	RGD
Celera	2	121,720,414 - 121,753,492 (+)	RGD
cM Map	2		ENTREZGENE

Sequence:

show sequence

GGGCGCATGCGCGCGAGGGAGCGCGCACCCTGTCCGATCTTCTAGAGTCCGAGAACTGTGGAGG
CTGGAGAGGAGTGGCCGGAGCCGCCGGGTGAGGCTTCTGGAAAGTAGCTGAGGGAACTAGTCAG
CGGGACAGAGTATCCGTATTTCTGTGCCCAGCAGTGTGACGACTCACCATGGATAATCTGTCCC
CAGAGGAAGTTCAGCTGCGGGCTCACCAGGTTACTGATGAGTCTCTGGAAAGCACAAGGAGAAT
CCTGGGTTTAGCCATTGAGTCTCAGGATGCAGGAATCAAGACCATCACTATGCTGGATGAGCAA
GGGGAACAACTAAATCGCATAGAAGAAGGCATGGACCAAATAAATAAAGACATGAGAGAGGCAG
AGAAGACTTTAACAGAACTCAACAAGTGTTGTGGCCTCTGCATCTGCCCTTGTAATAGGACAAA
GAACTTTGAGTCTGGAAAGAACTATAAGGCAACATGGGGAGATGGTGGCGACAACTCACCTAGC
AATGTAGTATCTAAGCAACCGAGCCGGATTACAAATGGTCAGCCTCAGCAAACTACAGGAGCAG
CCAGTGGTGGATACATTAAACGTATAACTAATGATGCCAGAGAAGATGAGATGGAAGAGAACCT
GACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGAACATGGCTCTGGATATGGGCAATGAAATT
GATGCTCAAAACCAGCAAATACAGAAGATCACAGAAAAGGCTGACACCAACAAGAATCGTATTG
ACATTGCCAATACAAGAGCAAAGAAACTCATTGATAGTTAAAGCCCTGCTGTACTTCTTTACCT
GTTAACTCAGTTCTCTAGCTCCGCTGAGTCATTTCTTATTCAGAGTTTGAAAGGCTGTGAGAAG
GAGCAGAGGAGGAATGCCTCGCTACTTTCTTACTTTGTCTTTAGGGGGTAGGTTCTTGCTCAGG
CTTCCTTACAGTCTTTCTCAGTCACTCTCATAGGCTTCTTTCCATACATCACCGTCTCTTCATC
TCTTCATTTAGCTTCTTTTGCGTTCAAGATTTGGAAGCATTGCCAAAGAGCCATGAAAGAAGCA
GCTGTATAAGTAGCTTTTGTCATTATTGGTATTGGTTGGTTGGTTTGGTTTTGGTTTTGTGGTA
AAGAGCAAGAGGAAGGAATAGGAAATGAAGCTGACTCATTAAAGAAACTACAGGTCACAAAAAC
ACAGACGAGTGCTTGGGGTGGGAGCTTTCACACATGTGTTTTGTTCTGCATCACTGTTTTTCAG
CTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCACTTCTGAACCCATAGT
GATTTGTACGTATATACATAGGTTCTTGGATCCAGTTTCATATTGCACATGCAGGAACATTATA
TAAATGAGTGCCTTTTATTCTCACACAATGAGTCATGGCATGGTCCCATTGTAGGCCTGTTAAC
TTCATGAAGTTGACGGTAGCCTTTAAAAGATACACACACACACACACACACACATGAAATAGGA
GATTTCCTCAAAGTTTTGGGGAAACTTTTACAGTGTATCATGTGAATTCAGATTTACCTCAATA
CTAAGAATTATGTTTAGATATGAAAAAAACTTGTTTTGATCTCAGGTAGAAAAATAGATTGCTT
TGAGTTTTGTGTAGTTTTAAACATTTAAAAAGTCATAATTTGTTACTAAAAGTTGTTTGGAAAA
TTATGCCTTTATATTAATTATTGATGACCGCACTGCCATTCTCTCTGCCTTATGCACAGAATCA
AGTTTATGTAGATCCTGAAGTGTTAGGGAAGCTGAAATGGTATTTGTCACATTTGTTTAAAAAT
TAGCATCTGTACACTTTAGAGCTACTAAAGTAGACTGGTTTCACCAATAACCATTGCTTTATTC
TTACAATTAAATTTTATAATTAATGATATTGTTCTTTCAAATAGGTAATGTTTCTATGACTTAT
TTGTGGGGGCAATCATTTTATCAGCTTCTGTTGACATTAAATAAAGCAAATGTCCATACATCAA
GCACTCCAATAGAAAGCTGTATTAGCTCTCTTCTAATTTTTAGCAGAAGTGTTTACAGGAGTTT
CTATGGTTTGCTATGAGTCCATTCTAGACATTATCTTAGTCATTTGTACTTAAATACACTACTG
AGTATTTCTGAGTG

hide sequence

RefSeq Acc Id:

NR_182010

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NR_182011

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NR_182012

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NR_182013

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NR_182014

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NR_182015

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

NR_182016

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,176 - 120,433,533 (+)	NCBI

RefSeq Acc Id:

XM_006499054 ⟹ XP_006499117

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,139 - 120,431,885 (+)	NCBI
GRCm38	2	120,567,655 - 120,601,255 (+)	NCBI

Sequence:

show sequence

GCACAAGTCCTCCGGGCGCATGCGCGCGAGGGAGCGCGCACCCTGTCCGATCTTCTAGAGTCCG
AGAACTGTGGAGGCTGGAGAGGAGTGGCCGGAGCCGCCGGGTGAGGCTTCTGGAAAGTAGCTGA
GGGAACTAGTCAGCGGGACAGGTGGCTTCTTGTTGGGGGTGGGGTCTCCTTTCTACATTGTAGC
AACCATAAAACCAAGTGAGACTGGGCCAGAATTGGGAGTGGGTAGCTGGAGTCCCAGAGTATCC
GTATTTCTGTGCCCAGCAGTGTGACGACTCACCATGGATAATCTGTCCCCAGAGGAAGTTCAGC
TGCGGGCTCACCAGGTTACTGATGAGTCTCTGGAAAGCACAAGGAGAATCCTGGGTTTAGCCAT
TGAGTCTCAGGATGCAGGAATCAAGACCATCACTATGCTGGATGAGCAAGGGGAACAACTAAAT
CGCATAGAAGAAGGCATGGACCAAATAAATAAAGACATGAGAGAGGCAGAGAAGACTTTAACAG
AACTCAACAAGTGTTGTGGCCTCTGCATCTGCCCTTGTAATAGATTCTCAGTTGGTGACTGTTT
CTTTGAAACCAGGACAAAGAACTTTGAGTCTGGAAAGAACTATAAGGCAACATGGGGAGATGGT
GGCGACAACTCACCTAGCAATGTAGTATCTAAGCAACCGAGCCGGATTACAAATGGTCAGCCTC
AGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAATGATGCCAGAGAAGA
TGAGATGGAAGAGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGAACATGGCTCTG
GATATGGGCAATGAAATTGATGCTCAAAACCAGCAAATACAGAAGATCACAGAAAAGGCTGACA
CCAACAAGAATCGTATTGACATTGCCAATACAAGAGCAAAGAAACTCATTGATAGTTAAAGCCC
TGCTGTACTTCTTTACCTGTTAACTCAGTTCTCTAGCTCCGCTGAGTCATTTCTTATTCAGAGT
TTGAAAGGCTGTGAGAAGGAGCAGAGGAGGAATGCCTCGCTACTTTCTTACTTTGTCTTTAGGG
GGTAGGTTCTTGCTCAGGCTTCCTTACAGTCTTTCTCAGTCACTCTCATAGGCTTCTTTCCATA
CATCACCGTCTCTTCATCTCTTCATTTAGCTTCTTTTGCGTTCAAGATTTGGAAGCATTGCCAA
AGAGCCATGAAAGAAGCAGCTGTATAAGTAGCTTTTGTCATTATTGGTATTGGTTGGTTGGTTT
GGTTTTGGTTTTGTGGTAAAGAGCAAGAGGAAGGAATAGGAAATGAAGCTGACTCATTAAAGAA
ACTACAGGTCACAAAAACACAGACGAGTGCTTGGGGTGGGAGCTTTCACACATGTGTTTTGTTC
TGCATCACTGTTTTTCAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTT
CACTTCTGAACCCATAGTGATTTGTACGTATATACATAGGTTCTTGGATCCAGTTTCATATTGC
ACATGCAGGAACATTATATAAATGAGTGCCTTTTATTCTCACACAATGAGTCATGGCATGGTCC
CATTGTAGGCCTGTTAACTTCATGAAGTTGACGGTAGCCTTTAAAAGATACACACACACACACA
CACACACATGAAATAGGAGATTTCCTCAAAGTTTTGGGGAAACTTTTACAGTGTATCATGTGAA
TTCAGATTTACCTCAATACTAAGAATTATGTTTAGATATGAAAAAAACTTGTTTTGATCTCAGG
TAGAAAAATAGATTGCTTTGAGTTTTGTGTAGTTTTAAACATTTAAAAAGTCATAATTTGTTAC
TAAAAGTTGTTTGGAAAATTATGCCTTTATATTAATTATTGATGACCGCACTGCCATTCTCTCT
GCCTTATGCACAGAATCAAGTTTATGTAGATCCTGAAGTGTTAGGGAAGCTGAAATGGTATTTG
TCACATTTGTTTAAAAATTAGCATCTGTACACTTTAGAGCTACTAAAGTAGACTGGTTTCACCA
ATAACCATTGCTTTATTCTTACAATTAAATTTTATAATTAATGATATTGTTCTTTCAAATAGGT
AATGTTTCTATGACTTATTTGTGGGGGCAATCATTTTATCAGCTTCTGTTGACATTAAATAAAG
CAAATGTCCATACATCAAGCACTCCAATAGAAAGCTGTATTAGCTCTCTTCTAATTTTTAGCAG
AAGTGTTTACAGGAGTTTCTATGGTTTGCTATGAGTCCATTCTAGACATTATCTTAGTCATTTG
TACTTAAATACACTACTGAGTATTTCTGAGTGAGAATTACAAGTCACTTATTGAAGAAGATAAA
TGTAGCCTACCAACATTCAGAGGGTGAAGAGGACAGTATTTAAAACAACAGAGAAATGCCTGGC
ATGGTGGCGCACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGA
GGCCAGCCTGGTCTACAGAGTGAGTTCCAGTTCAGCCAGGGCTATACAGAGAAACCCTGTCTCG
AAAAACAAACAAAAAAATCAAAGAAGCACTCCATGTCAGAGTGGTTCATTTGTCAGGTAAAGAT
ACTGAATTTAAGAGGTGTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTC
CTTAAAAACATGCTGATTTGTCTAAAGGAACGGTACCAAAAGGTGGCATCCAAGGTATATTTGG
TTAGAATATGCACCAAAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATGCTATTTCTTTGT
CTTGGTTTCCATATCTGTAAATGGGGATTAATAAATCTTATTTTATAAACTTATTCACAGACCA
GTAATGCCCAGAAATTTCTTAGAATATGCCAGGCTCAGAGTCCATACTGGTAATCCCAAAATTT
GGGAACCTGAGGCACAATCTACCCAGTGAGTTGTGGGCCAGCCTAAATTGTGTCAAAAAACAGC
ACCCCCTCCC

hide sequence

RefSeq Acc Id:

XM_006499056 ⟹ XP_006499119

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	120,398,137 - 120,431,885 (+)	NCBI
GRCm38	2	120,567,655 - 120,601,255 (+)	NCBI

Sequence:

show sequence

GCGCACAAGTCCTCCGGGCGCATGCGCGCGAGGGAGCGCGCACCCTGTCCGATCTTCTAGAGTC
CGAGAACTGTGGAGGCTGGAGAGGAGTGGCCGGAGCCGCCGGAGTATCCGTATTTCTGTGCCCA
GCAGTGTGACGACTCACCATGGATAATCTGTCCCCAGAGGAAGTTCAGCTGCGGGCTCACCAGG
TTACTGATGAGTCTCTGGAAAGCACAAGGAGAATCCTGGGTTTAGCCATTGAGTCTCAGGATGC
AGGAATCAAGACCATCACTATGCTGGATGAGCAAGGGGAACAACTAAATCGCATAGAAGAAGGC
ATGGACCAAATAAATAAAGACATGAGAGAGGCAGAGAAGACTTTAACAGAACTCAACAAGTGTT
GTGGCCTCTGCATCTGCCCTTGTAATAGATTCTCAGTTGGTGACTGTTTCTTTGAAACCAGGAC
AAAGAACTTTGAGTCTGGAAAGAACTATAAGGCAACATGGGGAGATGGTGGCGACAACTCACCT
AGCAATGTAGTATCTAAGCAACCGAGCCGGATTACAAATGGTCAGCCTCAGCAAACTACAGGAG
CAGCCAGTGGTGGATACATTAAACGTATAACTAATGATGCCAGAGAAGATGAGATGGAAGAGAA
CCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGAACATGGCTCTGGATATGGGCAATGAA
ATTGATGCTCAAAACCAGCAAATACAGAAGATCACAGAAAAGGCTGACACCAACAAGAATCGTA
TTGACATTGCCAATACAAGAGCAAAGAAACTCATTGATAGTTAAAGCCCTGCTGTACTTCTTTA
CCTGTTAACTCAGTTCTCTAGCTCCGCTGAGTCATTTCTTATTCAGAGTTTGAAAGGCTGTGAG
AAGGAGCAGAGGAGGAATGCCTCGCTACTTTCTTACTTTGTCTTTAGGGGGTAGGTTCTTGCTC
AGGCTTCCTTACAGTCTTTCTCAGTCACTCTCATAGGCTTCTTTCCATACATCACCGTCTCTTC
ATCTCTTCATTTAGCTTCTTTTGCGTTCAAGATTTGGAAGCATTGCCAAAGAGCCATGAAAGAA
GCAGCTGTATAAGTAGCTTTTGTCATTATTGGTATTGGTTGGTTGGTTTGGTTTTGGTTTTGTG
GTAAAGAGCAAGAGGAAGGAATAGGAAATGAAGCTGACTCATTAAAGAAACTACAGGTCACAAA
AACACAGACGAGTGCTTGGGGTGGGAGCTTTCACACATGTGTTTTGTTCTGCATCACTGTTTTT
CAGCTTCTGCTCCAAAGGAGAATACAATGAGTTTTCTAGAAGTGAGCTTCACTTCTGAACCCAT
AGTGATTTGTACGTATATACATAGGTTCTTGGATCCAGTTTCATATTGCACATGCAGGAACATT
ATATAAATGAGTGCCTTTTATTCTCACACAATGAGTCATGGCATGGTCCCATTGTAGGCCTGTT
AACTTCATGAAGTTGACGGTAGCCTTTAAAAGATACACACACACACACACACACACATGAAATA
GGAGATTTCCTCAAAGTTTTGGGGAAACTTTTACAGTGTATCATGTGAATTCAGATTTACCTCA
ATACTAAGAATTATGTTTAGATATGAAAAAAACTTGTTTTGATCTCAGGTAGAAAAATAGATTG
CTTTGAGTTTTGTGTAGTTTTAAACATTTAAAAAGTCATAATTTGTTACTAAAAGTTGTTTGGA
AAATTATGCCTTTATATTAATTATTGATGACCGCACTGCCATTCTCTCTGCCTTATGCACAGAA
TCAAGTTTATGTAGATCCTGAAGTGTTAGGGAAGCTGAAATGGTATTTGTCACATTTGTTTAAA
AATTAGCATCTGTACACTTTAGAGCTACTAAAGTAGACTGGTTTCACCAATAACCATTGCTTTA
TTCTTACAATTAAATTTTATAATTAATGATATTGTTCTTTCAAATAGGTAATGTTTCTATGACT
TATTTGTGGGGGCAATCATTTTATCAGCTTCTGTTGACATTAAATAAAGCAAATGTCCATACAT
CAAGCACTCCAATAGAAAGCTGTATTAGCTCTCTTCTAATTTTTAGCAGAAGTGTTTACAGGAG
TTTCTATGGTTTGCTATGAGTCCATTCTAGACATTATCTTAGTCATTTGTACTTAAATACACTA
CTGAGTATTTCTGAGTGAGAATTACAAGTCACTTATTGAAGAAGATAAATGTAGCCTACCAACA
TTCAGAGGGTGAAGAGGACAGTATTTAAAACAACAGAGAAATGCCTGGCATGGTGGCGCACACC
TTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTA
CAGAGTGAGTTCCAGTTCAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACAAACAAAAA
AATCAAAGAAGCACTCCATGTCAGAGTGGTTCATTTGTCAGGTAAAGATACTGAATTTAAGAGG
TGTGGCTAAGTCCAAAACACTGAATTGTGCTGTACCTAAAAGTGCTTTCCTTAAAAACATGCTG
ATTTGTCTAAAGGAACGGTACCAAAAGGTGGCATCCAAGGTATATTTGGTTAGAATATGCACCA
AAACCCCTTTGCTCTTGCTGGCTGGTGTGAATGTATGCTATTTCTTTGTCTTGGTTTCCATATC
TGTAAATGGGGATTAATAAATCTTATTTTATAAACTTATTCACAGACCAGTAATGCCCAGAAAT
TTCTTAGAATATGCCAGGCTCAGAGTCCATACTGGTAATCCCAAAATTTGGGAACCTGAGGCAC
AATCTACCCAGTGAGTTGTGGGCCAGCCTAAATTGTGTCAAAAAACAGCACCCCCTCCC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001171263	(Get FASTA)	NCBI Sequence Viewer
	NP_001171264	(Get FASTA)	NCBI Sequence Viewer
	NP_001399555	(Get FASTA)	NCBI Sequence Viewer
	NP_001399556	(Get FASTA)	NCBI Sequence Viewer
	NP_001399557	(Get FASTA)	NCBI Sequence Viewer
	NP_001399558	(Get FASTA)	NCBI Sequence Viewer
	NP_001399559	(Get FASTA)	NCBI Sequence Viewer
	NP_001399560	(Get FASTA)	NCBI Sequence Viewer
	NP_001399561	(Get FASTA)	NCBI Sequence Viewer
	NP_001399562	(Get FASTA)	NCBI Sequence Viewer
	NP_033248	(Get FASTA)	NCBI Sequence Viewer
	XP_006499117	(Get FASTA)	NCBI Sequence Viewer
	XP_006499119	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB53597	(Get FASTA)	NCBI Sequence Viewer
	AAB62932	(Get FASTA)	NCBI Sequence Viewer
	AAF23503	(Get FASTA)	NCBI Sequence Viewer
	AAH70456	(Get FASTA)	NCBI Sequence Viewer
	BAA20345	(Get FASTA)	NCBI Sequence Viewer
	BAB30686	(Get FASTA)	NCBI Sequence Viewer
	BAB31577	(Get FASTA)	NCBI Sequence Viewer
	BAF91555	(Get FASTA)	NCBI Sequence Viewer
	EDL28001	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000028743
	ENSMUSP00000028743.4
	ENSMUSP00000106339
	ENSMUSP00000106339.3
	ENSMUSP00000112138
	ENSMUSP00000112138.2
	ENSMUSP00000116935
	ENSMUSP00000116935.2
	ENSMUSP00000119652.2
	ENSMUSP00000121509.2
GenBank Protein	O09044	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_033248 ⟸ NM_009222
- Peptide Label:	isoform b
- UniProtKB:	O09044 (UniProtKB/Swiss-Prot), O35620 (UniProtKB/Swiss-Prot), A2AKH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNLSPEEVQLRAHQVTDESLESTRRILGLAIESQDAGIKTITMLDEQGEQLNRIEEGMDQINK DMREAEKTLTELNKCCGLCICPCNRTKNFESGKNYKATWGDGGDNSPSNVVSKQPSRITNGQPQ QTTGAASGGYIKRITNDAREDEMEENLTQVGSILGNLKNMALDMGNEIDAQNQQIQKITEKADT NKNRIDIANTRAKKLIDS hide sequence

RefSeq Acc Id:	NP_001171263 ⟸ NM_001177792
- Peptide Label:	isoform a
- UniProtKB:	Q9D3L3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNLSPEEVQLRAHQVTDESLESTRRILGLAIESQDAGIKTITMLDEQGEQLNRIEEGMDQINK DMREAEKTLTELNKCCGLCICPCNRFSVGDCFFETRTKNFESGKNYKATWGDGGDNSPSNVVSK QPSRITNGQPQQTTGAASGGYIKRITNDAREDEMEENLTQVGSILGNLKNMALDMGNEIDAQNQ QIQKITEKADTNKNRIDIANTRAKKLIDS hide sequence

RefSeq Acc Id:	NP_001171264 ⟸ NM_001177793
- Peptide Label:	isoform b
- UniProtKB:	O09044 (UniProtKB/Swiss-Prot), O35620 (UniProtKB/Swiss-Prot), A2AKH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNLSPEEVQLRAHQVTDESLESTRRILGLAIESQDAGIKTITMLDEQGEQLNRIEEGMDQINK DMREAEKTLTELNKCCGLCICPCNRTKNFESGKNYKATWGDGGDNSPSNVVSKQPSRITNGQPQ QTTGAASGGYIKRITNDAREDEMEENLTQVGSILGNLKNMALDMGNEIDAQNQQIQKITEKADT NKNRIDIANTRAKKLIDS hide sequence

RefSeq Acc Id:	XP_006499117 ⟸ XM_006499054
- Peptide Label:	isoform X1
- UniProtKB:	Q9D3L3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNLSPEEVQLRAHQVTDESLESTRRILGLAIESQDAGIKTITMLDEQGEQLNRIEEGMDQINK DMREAEKTLTELNKCCGLCICPCNRFSVGDCFFETRTKNFESGKNYKATWGDGGDNSPSNVVSK QPSRITNGQPQQTTGAASGGYIKRITNDAREDEMEENLTQVGSILGNLKNMALDMGNEIDAQNQ QIQKITEKADTNKNRIDIANTRAKKLIDS hide sequence

RefSeq Acc Id:	XP_006499119 ⟸ XM_006499056
- Peptide Label:	isoform X1
- UniProtKB:	Q9D3L3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNLSPEEVQLRAHQVTDESLESTRRILGLAIESQDAGIKTITMLDEQGEQLNRIEEGMDQINK DMREAEKTLTELNKCCGLCICPCNRFSVGDCFFETRTKNFESGKNYKATWGDGGDNSPSNVVSK QPSRITNGQPQQTTGAASGGYIKRITNDAREDEMEENLTQVGSILGNLKNMALDMGNEIDAQNQ QIQKITEKADTNKNRIDIANTRAKKLIDS hide sequence

Ensembl Acc Id:

ENSMUSP00000119652 ⟸ ENSMUST00000150611

Ensembl Acc Id:

ENSMUSP00000106339 ⟸ ENSMUST00000110711

Ensembl Acc Id:

ENSMUSP00000028743 ⟸ ENSMUST00000028743

Ensembl Acc Id:

ENSMUSP00000121509 ⟸ ENSMUST00000153580

Ensembl Acc Id:

ENSMUSP00000116935 ⟸ ENSMUST00000142278

Ensembl Acc Id:

ENSMUSP00000112138 ⟸ ENSMUST00000116437

RefSeq Acc Id:	NP_001399559 ⟸ NM_001412630
- Peptide Label:	isoform f
- UniProtKB:	B0R030 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001399557 ⟸ NM_001412628
- Peptide Label:	isoform d

RefSeq Acc Id:	NP_001399555 ⟸ NM_001412626
- Peptide Label:	isoform b
- UniProtKB:	O09044 (UniProtKB/Swiss-Prot), O35620 (UniProtKB/Swiss-Prot), A2AKH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001399556 ⟸ NM_001412627
- Peptide Label:	isoform b
- UniProtKB:	O09044 (UniProtKB/Swiss-Prot), O35620 (UniProtKB/Swiss-Prot), A2AKH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001399558 ⟸ NM_001412629
- Peptide Label:	isoform e

RefSeq Acc Id:	NP_001399561 ⟸ NM_001412632
- Peptide Label:	isoform h

RefSeq Acc Id:	NP_001399560 ⟸ NM_001412631
- Peptide Label:	isoform g

RefSeq Acc Id:	NP_001399562 ⟸ NM_001412633
- Peptide Label:	isoform i

Protein Domains

t-SNARE coiled-coil homology

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O09044-F1-model_v2	AlphaFold	O09044	1-210	view protein structure

Promoters

RGD ID:

6832784

Promoter ID:

MM_KWN:31328

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000090016, ENSMUST00000110711, OTTMUST00000037103, OTTMUST00000037105, OTTMUST00000037106, OTTMUST00000037107, OTTMUST00000037109, UC008LWH.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	2	120,393,101 - 120,393,601 (+)	MPROMDB

RGD ID:

6832786

Promoter ID:

MM_KWN:31330

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour

Transcripts:

OTTMUST00000037108

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	2	120,415,561 - 120,416,061 (+)	MPROMDB

RGD ID:

6878464

Promoter ID:

EPDNEW_M2663

Type:

initiation region

Name:

Snap23_1

Description:

Mus musculus synaptosomal-associated protein 23 , transcriptvariant 3, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	2	120,567,714 - 120,567,774	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:109356	AgrOrtholog
Ensembl Genes	ENSMUSG00000027287	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000028743	ENTREZGENE
	ENSMUST00000028743.10	UniProtKB/Swiss-Prot
	ENSMUST00000110711	ENTREZGENE
	ENSMUST00000110711.9	UniProtKB/Swiss-Prot
	ENSMUST00000116437	ENTREZGENE
	ENSMUST00000116437.8	UniProtKB/TrEMBL
	ENSMUST00000142278	ENTREZGENE
	ENSMUST00000142278.2	UniProtKB/TrEMBL
	ENSMUST00000150611.8	UniProtKB/TrEMBL
	ENSMUST00000153580.8	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.110	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	SNAP-25	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	T_SNARE_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:20619	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:109356	ENTREZGENE
NCBI Gene	20619	ENTREZGENE
PANTHER	SYNAPTOSOMAL ASSOCIATED PROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SYNAPTOSOMAL-ASSOCIATED PROTEIN 23	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	SNAP-25	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Snap23	PhenoGen
PROSITE	T_SNARE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	t_SNARE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SNARE fusion complex	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A2AKH4	ENTREZGENE, UniProtKB/TrEMBL
	B0R029_MOUSE	UniProtKB/TrEMBL
	B0R030	ENTREZGENE, UniProtKB/TrEMBL
	E9Q8A1_MOUSE	UniProtKB/TrEMBL
	O09044	ENTREZGENE
	O35620	ENTREZGENE
	Q9D3L3	ENTREZGENE, UniProtKB/TrEMBL
	SNP23_MOUSE	UniProtKB/Swiss-Prot
UniProt Secondary	O35620	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Mammalian Phenotype