Crls1 (cardiolipin synthase 1) - Rat Genome Database

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Gene: Crls1 (cardiolipin synthase 1) Mus musculus
Analyze
Symbol: Crls1
Name: cardiolipin synthase 1
RGD ID: 1322280
MGI Page MGI
Description: Predicted to enable cardiolipin synthase (CMP-forming). Predicted to be involved in cardiolipin biosynthetic process; response to phosphatidylethanolamine; and response to thyroxine. Predicted to act upstream of or within phospholipid biosynthetic process. Located in mitochondrion. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 57. Orthologous to human CRLS1 (cardiolipin synthase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 0610009I22Rik; 4930557M15Rik; 5730490M08Rik; cardiolipin synthase; cardiolipin synthase (CMP-forming); CLS; RP23-77H16.4
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392132,688,557 - 132,708,706 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2132,688,586 - 132,708,705 (+)EnsemblGRCm39 Ensembl
GRCm382132,846,650 - 132,866,786 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2132,846,666 - 132,866,785 (+)EnsemblGRCm38mm10GRCm38
MGSCv372132,672,402 - 132,692,509 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362132,538,107 - 132,558,214 (+)NCBIMGSCv36mm8
Celera2134,074,150 - 134,094,256 (+)NCBICelera
Cytogenetic Map2F2NCBI
cM Map264.77NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. Metabolism and function of mitochondrial cardiolipin. Ren M, etal., Prog Lipid Res. 2014 Jul;55:1-16. doi: 10.1016/j.plipres.2014.04.001. Epub 2014 Apr 24.
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073   PMID:18454555   PMID:18614015   PMID:20652826  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:22584571   PMID:24703837   PMID:28378742   PMID:29539633   PMID:29861389   PMID:30550785   PMID:30973865   PMID:31914590   PMID:32096565  
PMID:33913477  


Genomics

Comparative Map Data
Crls1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392132,688,557 - 132,708,706 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2132,688,586 - 132,708,705 (+)EnsemblGRCm39 Ensembl
GRCm382132,846,650 - 132,866,786 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2132,846,666 - 132,866,785 (+)EnsemblGRCm38mm10GRCm38
MGSCv372132,672,402 - 132,692,509 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362132,538,107 - 132,558,214 (+)NCBIMGSCv36mm8
Celera2134,074,150 - 134,094,256 (+)NCBICelera
Cytogenetic Map2F2NCBI
cM Map264.77NCBI
CRLS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38206,005,938 - 6,040,053 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl206,006,093 - 6,040,053 (+)EnsemblGRCh38hg38GRCh38
GRCh37205,986,584 - 6,020,699 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36205,934,879 - 5,966,039 (+)NCBINCBI36Build 36hg18NCBI36
Build 34205,934,878 - 5,966,037NCBI
Celera206,058,030 - 6,091,969 (+)NCBICelera
Cytogenetic Map20p12.3NCBI
HuRef205,943,143 - 5,977,077 (+)NCBIHuRef
CHM1_1205,986,812 - 6,020,722 (+)NCBICHM1_1
T2T-CHM13v2.0206,046,248 - 6,080,373 (+)NCBIT2T-CHM13v2.0
Crls1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83140,572,680 - 140,591,543 (+)NCBIGRCr8
mRatBN7.23120,119,822 - 120,138,674 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3120,119,852 - 120,138,655 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3124,014,927 - 124,033,792 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03132,618,474 - 132,637,312 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03130,271,061 - 130,289,926 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03125,503,638 - 125,522,460 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3125,503,638 - 125,522,441 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03131,987,416 - 132,006,238 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43120,647,517 - 120,666,325 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13120,553,089 - 120,571,893 (+)NCBI
Celera3118,905,817 - 118,924,625 (+)NCBICelera
Cytogenetic Map3q36NCBI
Crls1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541516,389,389 - 16,411,238 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541516,389,379 - 16,410,486 (+)NCBIChiLan1.0ChiLan1.0
CRLS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2216,930,367 - 6,964,281 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1206,927,198 - 6,961,112 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0206,003,915 - 6,037,853 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1205,786,880 - 5,820,369 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl205,786,880 - 5,820,285 (+)Ensemblpanpan1.1panPan2
CRLS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12415,814,111 - 15,837,485 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2415,814,770 - 15,893,458 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2415,636,360 - 15,659,777 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02416,216,783 - 16,240,209 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2416,217,448 - 16,295,816 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12415,823,546 - 15,846,980 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02415,931,691 - 15,955,123 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02416,263,381 - 16,286,864 (-)NCBIUU_Cfam_GSD_1.0
Crls1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640164,619,042 - 164,638,657 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493648513,050,401 - 13,070,197 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CRLS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1714,860,320 - 14,892,434 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11714,860,319 - 14,892,436 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21715,975,159 - 16,006,522 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CRLS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1232,094,610 - 32,127,186 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl232,091,519 - 32,127,170 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607112,414,163 - 12,448,881 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Crls1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247416,828,274 - 6,852,461 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Crls1
838 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:676
Count of miRNA genes:287
Interacting mature miRNAs:313
Transcripts:ENSMUST00000028835, ENSMUST00000110122, ENSMUST00000124834, ENSMUST00000124836, ENSMUST00000154160
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100824060134824269Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2100942930134943090Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2100942930134943090Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2100942930134943090Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
1301825Pbrgcsf1_mperipheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)Not determined2106233580140233729Mouse
10043875Bw25_mbody weight QTL 25 (mouse)Not determined2107255676141255676Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110489658144489807Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111173704145173821Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111173704145173821Mouse
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111173704145173821Mouse
1301201Chab1_mcholesterol absorption 1 (mouse)Not determined2111551028145551163Mouse
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112212746146213005Mouse
11038699Ltpr2b_mLeishmania tropica response 2b (mouse)2112212746146213005Mouse
11038700Ltpr2a_mLeishmania tropica response 2a (mouse)2112212746146213005Mouse
1301029T2dm3_mtype 2 diabetes mellitus 3 (mouse)Not determined2114288075132714157Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115212857149212994Mouse
11038696Ltpr2f_mLeishmania tropica response 2f (mouse)2115212857149212994Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
1300712El2_mepilepsy 2 (mouse)Not determined2122207146142532135Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2122883015156883131Mouse
1301066Otx2m2_morthodenticle homolog 2 (Drosophila) modifier 2 (mouse)Not determined2123231973148700377Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2123937311157937424Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
13506763Tbvq1_mtrabecular bone volume QTL 1 (mouse)2126041920135441920Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127664019161664118Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127664019161664118Mouse
1558989Gnf4_mgrowth and fatness 4 (mouse)Not determined2128173704132714157Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129341920163341920Mouse
13207586Mwmlpt2_mMorris water maze latency to platform, training, 2 (mouse)2131616184139216184Mouse
13207590Mwmlpa2_mMorris water maze latency to platform, all, 2 (mouse)2131616184139616184Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse

Markers in Region
UniSTS:234539  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382132,866,601 - 132,866,813UniSTSGRCm38
MGSCv372132,692,337 - 132,692,549UniSTSGRCm37
Celera2134,094,084 - 134,094,296UniSTS
Cytogenetic Map2F3UniSTS
Crls1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2F3UniSTS
cM Map264.77UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000028835   ⟹   ENSMUSP00000028835
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2132,688,586 - 132,708,705 (+)Ensembl
GRCm38.p6 Ensembl2132,846,666 - 132,866,785 (+)Ensembl
RefSeq Acc Id: ENSMUST00000110122   ⟹   ENSMUSP00000105749
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2132,688,596 - 132,706,055 (+)Ensembl
GRCm38.p6 Ensembl2132,846,676 - 132,864,135 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124834   ⟹   ENSMUSP00000129509
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2132,688,608 - 132,708,705 (+)Ensembl
GRCm38.p6 Ensembl2132,846,688 - 132,866,785 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124836   ⟹   ENSMUSP00000132682
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2132,689,654 - 132,708,361 (+)Ensembl
GRCm38.p6 Ensembl2132,847,734 - 132,866,441 (+)Ensembl
RefSeq Acc Id: ENSMUST00000154160   ⟹   ENSMUSP00000129137
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2132,689,658 - 132,707,807 (+)Ensembl
GRCm38.p6 Ensembl2132,847,738 - 132,865,887 (+)Ensembl
RefSeq Acc Id: NM_001024385   ⟹   NP_001019556
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392132,688,586 - 132,708,693 (+)NCBI
GRCm382132,846,666 - 132,866,773 (+)NCBI
MGSCv372132,672,402 - 132,692,509 (+)RGD
Celera2134,074,150 - 134,094,256 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_025646   ⟹   NP_079922
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392132,689,654 - 132,708,693 (+)NCBI
GRCm382132,847,734 - 132,866,773 (+)NCBI
MGSCv372132,672,402 - 132,692,509 (+)RGD
Celera2134,074,150 - 134,094,256 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006500012   ⟹   XP_006500075
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392132,689,548 - 132,708,328 (+)NCBI
GRCm382132,847,628 - 132,866,408 (+)NCBI
Sequence:
RefSeq Acc Id: XR_866333
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392132,688,557 - 132,708,706 (+)NCBI
GRCm382132,846,650 - 132,866,786 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001019556   ⟸   NM_001024385
- Peptide Label: isoform 1
- UniProtKB: Q9D4U1 (UniProtKB/Swiss-Prot),   Q80ZM8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_079922   ⟸   NM_025646
- Peptide Label: isoform 2
- UniProtKB: A0A0C3SFZ5 (UniProtKB/TrEMBL),   E9PYF8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006500075   ⟸   XM_006500012
- Peptide Label: isoform X1
- UniProtKB: E9PYF8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000105749   ⟸   ENSMUST00000110122
RefSeq Acc Id: ENSMUSP00000132682   ⟸   ENSMUST00000124836
RefSeq Acc Id: ENSMUSP00000129509   ⟸   ENSMUST00000124834
RefSeq Acc Id: ENSMUSP00000028835   ⟸   ENSMUST00000028835
RefSeq Acc Id: ENSMUSP00000129137   ⟸   ENSMUST00000154160

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80ZM8-F1-model_v2 AlphaFold Q80ZM8 1-303 view protein structure

Promoters
RGD ID:6831076
Promoter ID:MM_KWN:31873
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Liver,   Lung,   MEF_B4
Transcripts:ENSMUST00000028835,   UC008MNL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362132,672,249 - 132,672,749 (+)MPROMDB
RGD ID:6831108
Promoter ID:MM_KWN:31874
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   MEF_B6,   Spleen
Transcripts:NM_025646,   OTTMUST00000037220,   OTTMUST00000037226
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362132,672,321 - 132,674,092 (+)MPROMDB
RGD ID:6878868
Promoter ID:EPDNEW_M2885
Type:initiation region
Name:Crls1_1
Description:Mus musculus cardiolipin synthase 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382132,846,661 - 132,846,721EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1913836 AgrOrtholog
Ensembl Genes ENSMUSG00000027357 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000028835 ENTREZGENE
  ENSMUST00000028835.13 UniProtKB/Swiss-Prot
  ENSMUST00000110122.10 UniProtKB/TrEMBL
  ENSMUST00000124834 ENTREZGENE
  ENSMUST00000124834.8 UniProtKB/TrEMBL
  ENSMUST00000124836 ENTREZGENE
  ENSMUST00000124836.8 UniProtKB/TrEMBL
  ENSMUST00000154160 ENTREZGENE
  ENSMUST00000154160.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1760 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CDP-OH_P_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CDP-OH_PTrfase_TM_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Phosphatidylglycerol_P_synth UniProtKB/TrEMBL
KEGG Report mmu:66586 UniProtKB/Swiss-Prot
MGD MGI:1913836 ENTREZGENE
NCBI Gene 66586 ENTREZGENE
PANTHER CARDIOLIPIN SYNTHASE (CMP-FORMING) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CDP-OH_P_transf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Crls1 PhenoGen
PIRSF Phos_ph_gly_syn UniProtKB/TrEMBL
UniProt A0A0C3SFZ5 ENTREZGENE, UniProtKB/TrEMBL
  CRLS1_MOUSE UniProtKB/Swiss-Prot
  E9PUH6_MOUSE UniProtKB/TrEMBL
  E9PUW6_MOUSE UniProtKB/TrEMBL
  E9PYF8 ENTREZGENE, UniProtKB/TrEMBL
  Q80ZM8 ENTREZGENE
  Q9D4U1 ENTREZGENE
UniProt Secondary Q9D4U1 UniProtKB/Swiss-Prot