Pomt1 (protein-O-mannosyltransferase 1) - Rat Genome Database

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Gene: Pomt1 (protein-O-mannosyltransferase 1) Mus musculus
Analyze
Symbol: Pomt1
Name: protein-O-mannosyltransferase 1
RGD ID: 732789
MGI Page MGI
Description: Predicted to enable mannosyltransferase activity. Acts upstream of or within extracellular matrix organization. Located in acrosomal vesicle and sarcoplasmic reticulum. Is expressed in several structures, including central nervous system; eye; gonad; heart; and hemolymphoid system gland. Used to study muscular dystrophy-dystroglycanopathy. Human ortholog(s) of this gene implicated in cardiomyopathy; cleft lip; lissencephaly; and muscular dystrophy (multiple). Orthologous to human POMT1 (protein O-mannosyltransferase 1); PARTICIPATES IN O-linked glycan biosynthetic pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI505244; dolichyl-phosphate-mannose--protein mannosyltransferase 1; protein O-mannosyl-transferase 1; protein O-mannosyltransferase 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,126,652 - 32,145,017 (+)NCBIGRCm39mm39
GRCm39 Ensembl232,126,602 - 32,145,017 (+)Ensembl
GRCm38232,236,590 - 32,255,005 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,236,590 - 32,255,005 (+)EnsemblGRCm38mm10GRCm38
MGSCv37232,092,203 - 32,110,525 (+)NCBIGRCm37mm9NCBIm37
MGSCv36232,058,692 - 32,077,014 (+)NCBImm8
Celera231,941,009 - 31,959,335 (+)NCBICelera
Cytogenetic Map2BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12670716   PMID:14610273   PMID:14681479   PMID:15383666   PMID:15489334   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:17456771   PMID:18490429   PMID:18799693   PMID:20816174   PMID:21267068   PMID:21873635   PMID:24256719   PMID:24297939   PMID:29867208   PMID:32290105  


Genomics

Comparative Map Data
Pomt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,126,652 - 32,145,017 (+)NCBIGRCm39mm39
GRCm39 Ensembl232,126,602 - 32,145,017 (+)Ensembl
GRCm38232,236,590 - 32,255,005 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,236,590 - 32,255,005 (+)EnsemblGRCm38mm10GRCm38
MGSCv37232,092,203 - 32,110,525 (+)NCBIGRCm37mm9NCBIm37
MGSCv36232,058,692 - 32,077,014 (+)NCBImm8
Celera231,941,009 - 31,959,335 (+)NCBICelera
Cytogenetic Map2BNCBI
POMT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9131,502,789 - 131,523,806 (+)EnsemblGRCh38hg38GRCh38
GRCh389131,502,902 - 131,523,803 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379134,378,305 - 134,399,186 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369133,368,110 - 133,389,014 (+)NCBINCBI36hg18NCBI36
Build 349131,407,865 - 131,428,746NCBI
Celera9104,918,461 - 104,939,373 (+)NCBI
Cytogenetic Map9q34.13NCBI
HuRef9103,872,837 - 103,893,810 (+)NCBIHuRef
CHM1_19134,527,759 - 134,548,591 (+)NCBICHM1_1
Pomt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2315,520,717 - 15,538,579 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl315,520,481 - 15,538,581 (+)Ensembl
Rnor_6.0311,253,424 - 11,271,873 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl311,254,026 - 11,271,872 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0316,602,808 - 16,620,746 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,348,786 - 11,366,633 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1311,245,184 - 11,263,006 (+)NCBI
Celera310,265,600 - 10,283,445 (+)NCBICelera
Cytogenetic Map3p12NCBI
Pomt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555131,189,169 - 1,203,933 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555131,189,169 - 1,203,933 (+)NCBIChiLan1.0ChiLan1.0
POMT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19131,265,750 - 131,285,881 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9131,265,750 - 131,285,881 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v09102,625,290 - 102,646,066 (+)NCBIMhudiblu_PPA_v0panPan3
POMT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1952,615,349 - 52,631,538 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl952,615,655 - 52,630,836 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha951,882,359 - 51,899,815 (-)NCBI
ROS_Cfam_1.0953,517,596 - 53,535,056 (-)NCBI
UMICH_Zoey_3.1952,297,027 - 52,312,897 (-)NCBI
UNSW_CanFamBas_1.0952,614,407 - 52,631,871 (-)NCBI
UU_Cfam_GSD_1.0952,708,808 - 52,726,275 (-)NCBI
Pomt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947198,481,216 - 198,499,348 (+)NCBI
SpeTri2.0NW_00493648718,249,472 - 18,267,875 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
POMT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1271,432,210 - 271,451,080 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11271,432,196 - 271,448,584 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21305,440,591 - 305,456,740 (+)NCBISscrofa10.2Sscrofa10.2susScr3
POMT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1126,620,179 - 6,639,051 (-)NCBI
ChlSab1.1 Ensembl126,618,312 - 6,639,024 (-)Ensembl
Vero_WHO_p1.0NW_0236660798,918,116 - 8,938,223 (+)NCBI
Pomt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247604,494,701 - 4,508,735 (-)NCBI

Position Markers
AI528556  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38232,255,034 - 32,255,152UniSTSGRCm38
MGSCv37232,110,554 - 32,110,672UniSTSGRCm37
Celera231,959,364 - 31,959,482UniSTS
Cytogenetic Map2BUniSTS
AI505244  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38232,254,845 - 32,254,965UniSTSGRCm38
MGSCv37232,110,365 - 32,110,485UniSTSGRCm37
Celera231,959,175 - 31,959,295UniSTS
Cytogenetic Map2BUniSTS
Whitehead/MRC_RH2537.59UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388608993591306Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2778910341789249Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2834628442346384Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2841803942418228Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2949443443494563Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2949443443494563Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212472666726109Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21432455548324701Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220892967119064359Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220892967119064359Mouse
1357829Lvrq1_mliver weight QTL 1 (mouse)Not determined220892967119064359Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220892967119064359Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220892967119064359Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220892967119064359Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220892967119064359Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220892967119064359Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220892967119064359Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220892967119064359Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2123971355239859Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22123971355239859Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22379913357799257Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224334620148858457Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22470000055000000Mouse
8552705Cia25_mcollagen induced arthritis 25 (mouse)Not determined22478910333633160Mouse
8552706Cia24_mcollagen induced arthritis QTL 24 (mouse)Not determined22478910333633160Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22541803957081799Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22713263056506216Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22771204884183040Mouse
14746979Manh51_mmandible shape 51 (mouse)22907111763071117Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22907111763071117Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229417935148533014Mouse
12904008Cfq6_mconditioned fear QTL 6 (mouse)23131302344618192Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31324555105313225Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1618
Count of miRNA genes:729
Interacting mature miRNAs:919
Transcripts:ENSMUST00000036473, ENSMUST00000123740, ENSMUST00000126784, ENSMUST00000129163, ENSMUST00000132516, ENSMUST00000132853, ENSMUST00000138000, ENSMUST00000146485, ENSMUST00000151598, ENSMUST00000154684
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_145145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK050680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL808027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY007238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY494857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX200660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000036473   ⟹   ENSMUSP00000038722
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,126,602 - 32,145,017 (+)Ensembl
GRCm38.p6 Ensembl232,236,590 - 32,255,005 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123740   ⟹   ENSMUSP00000116543
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,127,351 - 32,133,724 (+)Ensembl
GRCm38.p6 Ensembl232,237,339 - 32,243,712 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126784
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,126,655 - 32,127,712 (+)Ensembl
GRCm38.p6 Ensembl232,236,643 - 32,237,700 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129163
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,126,697 - 32,145,013 (+)Ensembl
GRCm38.p6 Ensembl232,236,685 - 32,255,001 (+)Ensembl
RefSeq Acc Id: ENSMUST00000132516   ⟹   ENSMUSP00000118382
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,134,371 - 32,140,921 (+)Ensembl
GRCm38.p6 Ensembl232,244,359 - 32,250,909 (+)Ensembl
RefSeq Acc Id: ENSMUST00000132853
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,135,302 - 32,138,703 (+)Ensembl
GRCm38.p6 Ensembl232,245,290 - 32,248,691 (+)Ensembl
RefSeq Acc Id: ENSMUST00000138000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,137,585 - 32,141,783 (+)Ensembl
GRCm38.p6 Ensembl232,247,573 - 32,251,771 (+)Ensembl
RefSeq Acc Id: ENSMUST00000146485   ⟹   ENSMUSP00000116117
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,127,049 - 32,133,634 (+)Ensembl
GRCm38.p6 Ensembl232,237,037 - 32,243,622 (+)Ensembl
RefSeq Acc Id: ENSMUST00000151598
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,141,285 - 32,142,704 (+)Ensembl
GRCm38.p6 Ensembl232,251,273 - 32,252,692 (+)Ensembl
RefSeq Acc Id: ENSMUST00000154684
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,126,684 - 32,134,009 (+)Ensembl
GRCm38.p6 Ensembl232,236,672 - 32,243,997 (+)Ensembl
RefSeq Acc Id: ENSMUST00000192998   ⟹   ENSMUSP00000142212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,138,675 - 32,143,797 (+)Ensembl
GRCm38.p6 Ensembl232,248,663 - 32,253,785 (+)Ensembl
RefSeq Acc Id: NM_145145   ⟹   NP_660127
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,652 - 32,145,017 (+)NCBI
GRCm38232,236,640 - 32,255,005 (+)NCBI
MGSCv37232,092,203 - 32,110,525 (+)RGD
Celera231,941,009 - 31,959,335 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006498473   ⟹   XP_006498536
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,132,931 - 32,145,017 (+)NCBI
GRCm38232,242,919 - 32,255,005 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252268   ⟹   XP_030108128
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,713 - 32,145,017 (+)NCBI
GRCm38232,236,701 - 32,255,005 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036162744   ⟹   XP_036018637
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,676 - 32,145,017 (+)NCBI
RefSeq Acc Id: XM_036162745   ⟹   XP_036018638
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,676 - 32,145,017 (+)NCBI
RefSeq Acc Id: XR_004940786
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,676 - 32,145,017 (+)NCBI
RefSeq Acc Id: XR_004940787
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,676 - 32,145,017 (+)NCBI
RefSeq Acc Id: XR_004940788
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,676 - 32,145,017 (+)NCBI
RefSeq Acc Id: XR_004940789
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,676 - 32,145,017 (+)NCBI
RefSeq Acc Id: XR_004940790
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,126,676 - 32,145,017 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_660127   ⟸   NM_145145
- UniProtKB: Q8R2R1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006498536   ⟸   XM_006498473
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030108128   ⟸   XM_030252268
- Peptide Label: isoform X4
RefSeq Acc Id: ENSMUSP00000118382   ⟸   ENSMUST00000132516
RefSeq Acc Id: ENSMUSP00000116117   ⟸   ENSMUST00000146485
RefSeq Acc Id: ENSMUSP00000038722   ⟸   ENSMUST00000036473
RefSeq Acc Id: ENSMUSP00000142212   ⟸   ENSMUST00000192998
RefSeq Acc Id: ENSMUSP00000116543   ⟸   ENSMUST00000123740
RefSeq Acc Id: XP_036018637   ⟸   XM_036162744
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036018638   ⟸   XM_036162745
- Peptide Label: isoform X2
Protein Domains
MIR   PMT

Promoters
RGD ID:6832376
Promoter ID:MM_KWN:28675
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000031122,   OTTMUST00000031123,   OTTMUST00000031125,   OTTMUST00000031126,   OTTMUST00000031131,   OTTMUST00000031159,   OTTMUST00000076077,   UC008JER.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,090,861 - 32,092,802 (-)MPROMDB
RGD ID:6832095
Promoter ID:MM_KWN:28677
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:OTTMUST00000031128
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,100,614 - 32,101,114 (+)MPROMDB
RGD ID:6832097
Promoter ID:MM_KWN:28679
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   3T3L1_Day4,   Brain,   Kidney
Transcripts:OTTMUST00000031130
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,105,841 - 32,106,837 (+)MPROMDB
RGD ID:6847677
Promoter ID:MM_ACW:27994
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   3T3L1_Day4
Transcripts:POMT1.OSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,110,084 - 32,110,584 (+)MPROMDB
RGD ID:6876980
Promoter ID:EPDNEW_M1941
Type:initiation region
Name:Pomt1_1
Description:Mus musculus protein-O-mannosyltransferase 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38232,236,665 - 32,236,725EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2138994 AgrOrtholog
Ensembl Genes ENSMUSG00000039254 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000038722 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000116117 UniProtKB/TrEMBL
  ENSMUSP00000116543 UniProtKB/TrEMBL
  ENSMUSP00000118382 UniProtKB/TrEMBL
  ENSMUSP00000142212 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000036473 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000123740 UniProtKB/TrEMBL
  ENSMUST00000132516 UniProtKB/TrEMBL
  ENSMUST00000146485 UniProtKB/TrEMBL
  ENSMUST00000192998 UniProtKB/TrEMBL
InterPro GlyclTrfase_39-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_trans_39/83 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MIR_dom_sf UniProtKB/Swiss-Prot
  MIR_motif UniProtKB/Swiss-Prot
  PMT_4TMC UniProtKB/Swiss-Prot
KEGG Report mmu:99011 UniProtKB/Swiss-Prot
MGD MGI:2138994 ENTREZGENE
NCBI Gene 99011 ENTREZGENE
PANTHER PTHR10050 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MIR UniProtKB/Swiss-Prot
  PMT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PMT_4TMC UniProtKB/Swiss-Prot
PhenoGen Pomt1 PhenoGen
PROSITE MIR UniProtKB/Swiss-Prot
SMART MIR UniProtKB/Swiss-Prot
Superfamily-SCOP SSF82109 UniProtKB/Swiss-Prot
UniProt A0A0A6YXZ7_MOUSE UniProtKB/TrEMBL
  B0R070_MOUSE UniProtKB/TrEMBL
  B0R071_MOUSE UniProtKB/TrEMBL
  D6RI46_MOUSE UniProtKB/TrEMBL
  POMT1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q3UYD8 UniProtKB/Swiss-Prot
  Q64J18 UniProtKB/Swiss-Prot
  Q8BPJ6 UniProtKB/Swiss-Prot
  Q8BPU1 UniProtKB/Swiss-Prot
  Q8R474 UniProtKB/Swiss-Prot