Ankrd63 (ankyrin repeat domain 63) - Rat Genome Database

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Gene: Ankrd63 (ankyrin repeat domain 63) Mus musculus
Analyze
Symbol: Ankrd63
Name: ankyrin repeat domain 63
RGD ID: 1621933
MGI Page MGI
Description: Orthologous to human ANKRD63 (ankyrin repeat domain 63).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: ankyrin repeat domain-containing protein 63; Gm1337; hypothetical protein LOC383787; novel ankyrin repeat domain containing protein; uncharacterized protein LOC383787
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392118,529,584 - 118,534,444 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2118,529,584 - 118,534,444 (-)EnsemblGRCm39 Ensembl
GRCm382118,699,103 - 118,703,963 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2118,699,103 - 118,703,963 (-)EnsemblGRCm38mm10GRCm38
MGSCv372118,524,839 - 118,529,699 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362118,390,542 - 118,395,404 (-)NCBIMGSCv36mm8
MGSCv362119,646,125 - 119,650,987 (-)NCBIMGSCv36mm8
Celera2119,853,410 - 119,858,268 (-)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Comparative Map Data
Ankrd63
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392118,529,584 - 118,534,444 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2118,529,584 - 118,534,444 (-)EnsemblGRCm39 Ensembl
GRCm382118,699,103 - 118,703,963 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2118,699,103 - 118,703,963 (-)EnsemblGRCm38mm10GRCm38
MGSCv372118,524,839 - 118,529,699 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362118,390,542 - 118,395,404 (-)NCBIMGSCv36mm8
MGSCv362119,646,125 - 119,650,987 (-)NCBIMGSCv36mm8
Celera2119,853,410 - 119,858,268 (-)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.43NCBI
ANKRD63
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381540,278,372 - 40,283,064 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1540,278,372 - 40,283,064 (-)EnsemblGRCh38hg38GRCh38
GRCh371540,570,573 - 40,575,265 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361538,360,937 - 38,362,079 (-)NCBINCBI36Build 36hg18NCBI36
Celera1517,339,637 - 17,340,779 (-)NCBICelera
Cytogenetic Map15q15.1NCBI
HuRef1517,416,603 - 17,417,745 (-)NCBIHuRef
CHM1_11540,693,611 - 40,694,753 (-)NCBICHM1_1
T2T-CHM13v2.01538,085,289 - 38,089,977 (-)NCBIT2T-CHM13v2.0
Ankrd63
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83126,129,069 - 126,133,891 (-)NCBIGRCr8
mRatBN7.23105,675,148 - 105,679,970 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3105,663,638 - 105,682,404 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3109,348,012 - 109,352,839 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03117,943,576 - 117,948,403 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03115,603,938 - 115,608,765 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03110,488,092 - 110,496,876 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3110,491,226 - 110,492,398 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03117,029,008 - 117,038,164 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43105,196,986 - 105,198,158 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3104,589,553 - 104,598,334 (-)NCBICelera
Cytogenetic Map3q35NCBI
Ankrd63
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554167,212,413 - 7,216,526 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554167,212,413 - 7,216,526 (-)NCBIChiLan1.0ChiLan1.0
ANKRD63
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21629,512,374 - 29,517,350 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11533,663,804 - 33,668,781 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01519,212,457 - 19,217,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11537,467,417 - 37,471,486 (-)NCBIpanpan1.1PanPan1.1panPan2
ANKRD63
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1307,465,387 - 7,468,382 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl307,466,081 - 7,467,229 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha307,518,697 - 7,521,544 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0307,590,571 - 7,593,421 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl307,591,913 - 7,593,061 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1307,515,123 - 7,517,971 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0307,621,483 - 7,623,924 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0307,750,061 - 7,752,502 (-)NCBIUU_Cfam_GSD_1.0
Ankrd63
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864085,900,015 - 85,905,674 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364713,751,068 - 3,752,234 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364713,751,068 - 3,752,234 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKRD63
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1131,034,252 - 131,035,406 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11131,032,619 - 131,040,348 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21146,279,776 - 146,285,973 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANKRD63
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12642,732,737 - 42,736,964 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2642,732,823 - 42,733,968 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604898,227,413 - 98,232,227 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ankrd63
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248047,588,025 - 7,589,182 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248047,585,240 - 7,589,913 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1548
Count of miRNA genes:652
Interacting mature miRNAs:827
Transcripts:ENSMUST00000104937
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
12904007Cfq7_mconditioned fear QTL 7 (mouse)2118356772125048872Mouse
13506762Tbvq2_mtrabecular bone volume QTL 2 (mouse)2115430481124741920Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1301909Smdq2_msegregation of mitochondrial DNA QTL 2 (mouse)Not determined292778465126778607Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112212746146213005Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115212857149212994Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11532731Sluc31a_msusceptibility to lung cancer 31a (mouse)288015003122015170Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
12904935Edlmmq2_mextensor digitorum longus muscle mass QTL 2 (mouse)297210364131210364Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2100942930134943090Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2100942930134943090Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111173704145173821Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1300798Actre3_mactivity response to ethanol 3 (mouse)Not determined2112024987128173821Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
4142223Femwf4_mfemur work to failure 4 (mouse)Not determined88143423122143570Mouse
1301415Actre4_mactivity response to ethanol 4 (mouse)Not determined2112024987128173821Mouse
1301029T2dm3_mtype 2 diabetes mellitus 3 (mouse)Not determined2114288075132714157Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
1558825Aabpr_maberrant activation of B cell proliferation (mouse)Not determined2116033229122207534Mouse
12904954Gmmq2_mgastrocnemius muscle mass QTL 2 (mouse)297210364131210364Mouse
11038696Ltpr2f_mLeishmania tropica response 2f (mouse)2115212857149212994Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2100942930134943090Mouse
11038697Ltpr2d_mLeishmania tropica response 2d (mouse)286095716120095823Mouse
1301201Chab1_mcholesterol absorption 1 (mouse)Not determined2111551028145551163Mouse
11038698Ltpr2c_mLeishmania tropica response 2c (mouse)286095716120095823Mouse
11038699Ltpr2b_mLeishmania tropica response 2b (mouse)2112212746146213005Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
11038700Ltpr2a_mLeishmania tropica response 2a (mouse)2112212746146213005Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
11049568Lmr28c_mleishmaniasis resistance 28c (mouse)297123370131123532Mouse
11049569Lmr28d_mleishmaniasis resistance 28d (mouse)297123370131123532Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110489658144489807Mouse
1301825Pbrgcsf1_mperipheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)Not determined2106233580140233729Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100824060134824269Mouse
1301834Bits1_mbitterness sensitivity 1 (mouse)Not determined287440643121440778Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111173704145173821Mouse
11041906Lmr28a_mleishmaniasis resistance 28a (mouse)2103095716129213005Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1300852Lmr14_mleishmaniasis resistance 14 (mouse)Not determined286095716120095823Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111173704145173821Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
11049565Lmr28g_mleishmaniasis resistance 28g (mouse)286095716120095823Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
1301098Cd8mts3_mCD8 memory T cell subset 3 (mouse)Not determined291089974125090104Mouse
10043875Bw25_mbody weight QTL 25 (mouse)Not determined2107255676141255676Mouse

Markers in Region
RH143470  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382118,700,656 - 118,700,765UniSTSGRCm38
MGSCv372118,526,392 - 118,526,501UniSTSGRCm37
Celera2119,854,963 - 119,855,072UniSTS
Cytogenetic Map2E5UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000104937   ⟹   ENSMUSP00000100542
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,529,584 - 118,534,444 (-)Ensembl
GRCm38.p6 Ensembl2118,699,103 - 118,703,963 (-)Ensembl
RefSeq Acc Id: NM_001081971   ⟹   NP_001075440
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392118,529,584 - 118,534,444 (-)NCBI
GRCm382118,699,103 - 118,703,963 (-)ENTREZGENE
MGSCv372118,524,839 - 118,529,699 (-)RGD
Celera2119,853,410 - 119,858,268 (-)RGD
cM Map2 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001075440 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A2ARS0 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000100542
  ENSMUSP00000100542.2
RefSeq Acc Id: NP_001075440   ⟸   NM_001081971
- UniProtKB: A2ARS0 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000100542   ⟸   ENSMUST00000104937

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2ARS0-F1-model_v2 AlphaFold A2ARS0 1-390 view protein structure

Promoters
RGD ID:6831455
Promoter ID:MM_KWN:31181
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Brain,   Lung,   Spleen
Transcripts:NM_001081971
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362118,525,041 - 118,530,282 (-)MPROMDB
RGD ID:6878302
Promoter ID:EPDNEW_M2602
Type:single initiation site
Name:Ankrd63_1
Description:Mus musculus ankyrin repeat domain 63 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382118,703,963 - 118,704,023EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2686183 AgrOrtholog
Ensembl Genes ENSMUSG00000078137 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000104937 ENTREZGENE
  ENSMUST00000104937.2 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot
KEGG Report mmu:383787 UniProtKB/Swiss-Prot
MGD MGI:2686183 ENTREZGENE
NCBI Gene 383787 ENTREZGENE
PANTHER ANKYRIN REPEAT FAMILY A UniProtKB/Swiss-Prot
  REPEAT PROTEIN, PUTATIVE-RELATED UniProtKB/Swiss-Prot
Pfam Ank_2 UniProtKB/Swiss-Prot
PhenoGen Ankrd63 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot
  ANK_REPEAT UniProtKB/Swiss-Prot
SMART ANK UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot
UniProt A2ARS0 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-11-20 Ankrd63  ankyrin repeat domain 63  Gm1337  predicted gene 1337  Symbol and/or name change 5135510 APPROVED