Stam2 (signal transducing adaptor molecule (SH3 domain and ITAM motif) 2) - Rat Genome Database

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Gene: Stam2 (signal transducing adaptor molecule (SH3 domain and ITAM motif) 2) Mus musculus
Analyze
Symbol: Stam2
Name: signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
RGD ID: 1322987
MGI Page MGI
Description: Predicted to enable phosphatidylinositol binding activity and ubiquitin binding activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within protein transport. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in endocytic vesicle. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; heart; and skin. Orthologous to human STAM2 (signal transducing adaptor molecule 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1200004O12Rik; 5730456G07Rik; BB145015; Hb; Hbp; Hrs binding protein; hrs-binding protein; signal transducing adapter molecule 2; STAM-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39252,582,213 - 52,632,212 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl252,581,676 - 52,632,293 (-)EnsemblGRCm39 Ensembl
GRCm38252,692,206 - 52,742,149 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl252,691,664 - 52,742,281 (-)EnsemblGRCm38mm10GRCm38
MGSCv37252,547,725 - 52,601,183 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36252,514,215 - 52,564,158 (-)NCBIMGSCv36mm8
Celera254,422,788 - 54,476,181 (-)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map230.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9665811   PMID:10349636   PMID:10651905   PMID:10922068   PMID:10982817   PMID:11042159   PMID:11076861   PMID:12446783   PMID:12477932   PMID:12551915   PMID:12972556  
PMID:13129930   PMID:13679051   PMID:14610273   PMID:15113837   PMID:15489334   PMID:15592455   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16159959   PMID:16432517   PMID:16489693  
PMID:17967808   PMID:18405059   PMID:20130268   PMID:20697350   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22140097   PMID:22143071   PMID:22802532   PMID:26101075   PMID:26391954  
PMID:28190767   PMID:29676259   PMID:32325033  


Genomics

Comparative Map Data
Stam2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39252,582,213 - 52,632,212 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl252,581,676 - 52,632,293 (-)EnsemblGRCm39 Ensembl
GRCm38252,692,206 - 52,742,149 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl252,691,664 - 52,742,281 (-)EnsemblGRCm38mm10GRCm38
MGSCv37252,547,725 - 52,601,183 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36252,514,215 - 52,564,158 (-)NCBIMGSCv36mm8
Celera254,422,788 - 54,476,181 (-)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map230.41NCBI
STAM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382152,116,801 - 152,175,763 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2152,116,801 - 152,175,763 (-)EnsemblGRCh38hg38GRCh38
GRCh372152,973,315 - 153,032,277 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362152,683,352 - 152,740,752 (-)NCBINCBI36Build 36hg18NCBI36
Build 342152,800,614 - 152,858,014NCBI
Celera2146,587,981 - 146,647,203 (-)NCBICelera
Cytogenetic Map2q23.3NCBI
HuRef2144,859,495 - 144,918,505 (-)NCBIHuRef
CHM1_12152,979,182 - 153,038,398 (-)NCBICHM1_1
T2T-CHM13v2.02152,568,772 - 152,627,796 (-)NCBIT2T-CHM13v2.0
Stam2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8357,597,557 - 57,643,915 (-)NCBIGRCr8
mRatBN7.2337,186,145 - 37,234,810 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl337,186,145 - 37,234,812 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx340,561,810 - 40,608,247 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0349,146,594 - 49,193,031 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0346,931,520 - 46,977,955 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0338,230,676 - 38,277,433 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl338,230,618 - 38,277,440 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0343,329,060 - 43,378,948 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4334,213,013 - 34,259,375 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1334,109,386 - 34,155,747 (-)NCBI
Celera335,327,231 - 35,373,439 (-)NCBICelera
Cytogenetic Map3q12NCBI
Stam2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544017,607,593 - 17,653,140 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544017,611,656 - 17,653,140 (-)NCBIChiLan1.0ChiLan1.0
STAM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21354,800,956 - 54,860,293 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B54,815,936 - 54,875,241 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B39,416,452 - 39,475,861 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B156,656,386 - 156,715,402 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B156,656,386 - 156,715,402 (-)Ensemblpanpan1.1panPan2
STAM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11953,213,904 - 53,256,711 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1953,216,274 - 53,256,756 (-)NCBICanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1953,216,274 - 53,256,756 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2628,400,408 - 28,445,085 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01954,723,824 - 54,768,716 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1954,723,828 - 54,768,179 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11953,440,262 - 53,484,908 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01953,510,688 - 53,555,731 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01954,974,715 - 55,019,344 (-)NCBIUU_Cfam_GSD_1.0
Stam2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303116,135,645 - 116,190,942 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646925,431,917 - 25,482,347 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646925,432,067 - 25,481,089 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STAM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15115,404 - 168,657 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115115,297 - 168,659 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215157,393,889 - 157,424,041 (-)NCBISscrofa10.2Sscrofa10.2susScr3
STAM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11037,536,164 - 37,591,850 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1037,539,082 - 37,591,869 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040161,963,224 - 162,018,541 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Stam2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248664,909,479 - 4,962,691 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Stam2
2034 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1598
Count of miRNA genes:718
Interacting mature miRNAs:918
Transcripts:ENSMUST00000102759, ENSMUST00000127316, ENSMUST00000138290, ENSMUST00000150582, ENSMUST00000155516
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22112972555129871Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2112972555129871Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22368914557689269Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22459001254890012Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22530805156971811Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22702264256396228Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22896112962961129Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
4142447Pbwg1.7_mpostnatal body weight growth 1.7 (mouse)Not determined3579732469797406Mouse
4141186Pbwg1.8_mpostnatal body weight growth 1.8 (mouse)Not determined3579732469797406Mouse
4142133Pbwg1.6_mpostnatal body weight growth 1.6 (mouse)Not determined3579732469797406Mouse
1559001Eae33_mexperimental allergic encephalomyelitis susceptibility 33 (mouse)Not determined23599167971609412Mouse
10449151Hdl8_mhigh density lipoprotein (HDL) level 8 (mouse)23812972567072607Mouse
10449150Pvldlc1_mplasma VLDL-cholesterol 1 (mouse)23812972567072607Mouse
10449145Lanq1_mlanosterol level QTL 1 (mouse)23812972567072607Mouse
11038703Ltpr1_mLeishmania tropica response 1 (mouse)23997166573971811Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1301480Pbwg1_mpostnatal body weight growth 1 (mouse)Not determined24182071975820843Mouse
4141069Pbwg1.5_mpostnatal body weight growth 1.5 (mouse)Not determined4352061277520756Mouse
1300788Cia2_mcollagen induced arthritis QTL 2 (mouse)Not determined24352061277520756Mouse
1300671Cia4_mcollagen induced arthritis QTL 4 (mouse)Not determined24352061277520756Mouse
1301402Ap2q_malcohol preference 2 QTL (mouse)Not determined24352061277520756Mouse
1301411Pitm1_mprion incubation time 1 (mouse)Not determined24352061277520756Mouse
10755532Lymph5_mlymphocyte differential 5 (mouse)24419901778199017Mouse
1300645Alcp1_malcohol preference locus 1 (mouse)Not determined24522812867838868Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
11532740Pbwg1.10_mpostnatal body weight growth 1.10 (mouse)24813241282132495Mouse
1558820Moo1_mmodifier of Odc1 (mouse)Not determined174826974682269934Mouse
1301747Eae21_mexperimental allergic encephalomyelitis 21 (mouse)Not determined24826974682269934Mouse
1301235Alcw4_malcohol withdrawal 4 (mouse)Not determined24826974682269934Mouse
1300568Hdl1_mhigh density lipoprotein (HDL) level 1 (mouse)Not determined24826974682269934Mouse
10755526Lymph1_mlymphocyte differential 1 (mouse)25081931484819314Mouse
1300875Taste1_mtaste-saccharin preference 1 (mouse)Not determined25092317584923278Mouse
1300761Lgth1_mbody length 1 (mouse)Not determined25170327685703425Mouse
13464141Hbbcq3_mhemoglobin concentration QTL 3 (mouse)25244801986448136Mouse
13463471Hctq6_mhematocrit QTL 6 (mouse)25244801986448136Mouse

Markers in Region
BB145015  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38252,693,152 - 52,693,237UniSTSGRCm38
MGSCv37252,548,671 - 52,548,756UniSTSGRCm37
Celera254,423,735 - 54,423,820UniSTS
Cytogenetic Map2C1.1UniSTS
Whitehead/MRC_RH2806.74UniSTS
UniSTS:234396  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38252,692,203 - 52,692,418UniSTSGRCm38
MGSCv37252,547,722 - 52,547,937UniSTSGRCm37
Celera254,422,785 - 54,423,000UniSTS
Cytogenetic Map2C1.1UniSTS
UniSTS:234397  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38252,693,580 - 52,693,863UniSTSGRCm38
MGSCv37252,549,099 - 52,549,382UniSTSGRCm37
Celera254,424,163 - 54,424,446UniSTS
Cytogenetic Map2C1.1UniSTS
RH126285  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38252,722,719 - 52,722,954UniSTSGRCm38
MGSCv37252,581,753 - 52,581,988UniSTSGRCm37
Celera254,456,740 - 54,456,975UniSTS
Cytogenetic Map2C1.1UniSTS
cM Map231.0UniSTS
Whitehead/MRC_RH2848.66UniSTS
AB012611  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38252,694,575 - 52,694,714UniSTSGRCm38
MGSCv37252,550,094 - 52,550,233UniSTSGRCm37
Celera254,425,158 - 54,425,297UniSTS
Cytogenetic Map2C1.1UniSTS
Whitehead/MRC_RH2806.63UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001418464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_019667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB012611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL928960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY902333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT978680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ141211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000102759   ⟹   ENSMUSP00000099820
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl252,581,676 - 52,632,212 (-)Ensembl
GRCm38.p6 Ensembl252,691,664 - 52,742,200 (-)Ensembl
RefSeq Acc Id: ENSMUST00000127316   ⟹   ENSMUSP00000121898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl252,589,514 - 52,632,293 (-)Ensembl
GRCm38.p6 Ensembl252,699,502 - 52,742,281 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138290   ⟹   ENSMUSP00000114620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl252,609,726 - 52,632,168 (-)Ensembl
GRCm38.p6 Ensembl252,719,714 - 52,742,156 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150582
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl252,599,409 - 52,632,192 (-)Ensembl
GRCm38.p6 Ensembl252,709,397 - 52,742,180 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155516   ⟹   ENSMUSP00000119203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl252,599,691 - 52,632,202 (-)Ensembl
GRCm38.p6 Ensembl252,709,679 - 52,742,190 (-)Ensembl
RefSeq Acc Id: NM_001418464   ⟹   NP_001405393
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39252,582,213 - 52,632,212 (-)NCBI
RefSeq Acc Id: NM_001418465   ⟹   NP_001405394
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39252,582,213 - 52,632,212 (-)NCBI
RefSeq Acc Id: NM_001418466   ⟹   NP_001405395
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39252,582,213 - 52,632,212 (-)NCBI
RefSeq Acc Id: NM_001418467   ⟹   NP_001405396
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39252,603,833 - 52,632,212 (-)NCBI
RefSeq Acc Id: NM_019667   ⟹   NP_062641
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39252,582,213 - 52,632,212 (-)NCBI
GRCm38252,692,206 - 52,742,149 (-)NCBI
MGSCv37252,547,725 - 52,601,183 (-)RGD
Celera254,422,788 - 54,476,181 (-)RGD
cM Map2 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_062641   ⟸   NM_019667
- Peptide Label: isoform a
- UniProtKB: A2AU00 (UniProtKB/Swiss-Prot),   Q8C8Y4 (UniProtKB/Swiss-Prot),   O88811 (UniProtKB/Swiss-Prot),   Q3TGH8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000114620   ⟸   ENSMUST00000138290
RefSeq Acc Id: ENSMUSP00000121898   ⟸   ENSMUST00000127316
RefSeq Acc Id: ENSMUSP00000099820   ⟸   ENSMUST00000102759
RefSeq Acc Id: ENSMUSP00000119203   ⟸   ENSMUST00000155516
RefSeq Acc Id: NP_001405395   ⟸   NM_001418466
- Peptide Label: isoform c
RefSeq Acc Id: NP_001405394   ⟸   NM_001418465
- Peptide Label: isoform b
RefSeq Acc Id: NP_001405393   ⟸   NM_001418464
- Peptide Label: isoform b
RefSeq Acc Id: NP_001405396   ⟸   NM_001418467
- Peptide Label: isoform d
Protein Domains
ITAM   SH3   UIM   VHS

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O88811-F1-model_v2 AlphaFold O88811 1-523 view protein structure

Promoters
RGD ID:6832858
Promoter ID:MM_KWN:29220
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000100092,   ENSMUST00000102759,   ENSMUST00000112660,   OTTMUST00000030073,   OTTMUST00000030074,   OTTMUST00000030262,   OTTMUST00000077837
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36252,600,951 - 52,601,612 (-)MPROMDB
RGD ID:6877316
Promoter ID:EPDNEW_M2109
Type:initiation region
Name:Stam2_1
Description:Mus musculus signal transducing adaptor molecule 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38252,742,178 - 52,742,238EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1929100 AgrOrtholog
Ensembl Genes ENSMUSG00000055371 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000102759 ENTREZGENE
  ENSMUST00000102759.8 UniProtKB/Swiss-Prot
  ENSMUST00000127316 ENTREZGENE
  ENSMUST00000127316.8 UniProtKB/Swiss-Prot
  ENSMUST00000138290.2 UniProtKB/TrEMBL
  ENSMUST00000155516.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.1940 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.90 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 Domains UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ENTH_VHS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAM2_SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UIM_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VHS_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VHS_STAM2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56324 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1929100 ENTREZGENE
NCBI Gene 56324 ENTREZGENE
PANTHER HEMATOPOIETIC LINEAGE CELL-SPECIFIC PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam SH3_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VHS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Stam2 PhenoGen
PRINTS P67PHOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VHS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VHS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48464 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AU00 ENTREZGENE
  B0R0N7_MOUSE UniProtKB/TrEMBL
  O88811 ENTREZGENE
  Q3TGH8 ENTREZGENE, UniProtKB/TrEMBL
  Q3YEC8_MOUSE UniProtKB/TrEMBL
  Q8C8Y4 ENTREZGENE
  STAM2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary A2AU00 UniProtKB/Swiss-Prot
  Q8C8Y4 UniProtKB/Swiss-Prot