Stxbp1 (syntaxin binding protein 1) - Rat Genome Database

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Gene: Stxbp1 (syntaxin binding protein 1) Mus musculus
Analyze
Symbol: Stxbp1
Name: syntaxin binding protein 1
RGD ID: 11361
MGI Page MGI
Description: Enables syntaxin-1 binding activity. Involved in presynaptic dense core vesicle exocytosis and synaptic vesicle priming. Acts upstream of or within several processes, including axon target recognition; chemical synaptic transmission; and negative regulation of synaptic transmission. Located in several cellular components, including glutamatergic synapse; phagocytic vesicle; and presynaptic active zone membrane. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and sensory organ. Human ortholog(s) of this gene implicated in West syndrome and developmental and epileptic encephalopathy 4. Orthologous to human STXBP1 (syntaxin binding protein 1); PARTICIPATES IN synaptic vesicle exocytosis - neurotransmitter release pathway; insulin secretion pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; acetohydrazide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI317162; AI326233; minisatellite 10g detected by probe MMS10; MMS10-G; Ms10g; Munc-1; Munc-18a; Munc18-; Munc18-1; N-se; N-sec1; nse; nsec1; protein unc-18 homolog 1; protein unc-18 homolog A; Rb-se; Rb-sec1; Sxtb; Sxtbp1; syntaxin-binding protein 1; UNC-18 homolog; unc-18-1; unc-18A; Unc18; Unc18-1; Unc18h
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,677,619 - 32,737,249 (-)NCBIGRCm39mm39
GRCm39 Ensembl232,677,614 - 32,737,257 (-)Ensembl
GRCm38232,787,607 - 32,847,237 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,787,602 - 32,847,245 (-)EnsemblGRCm38mm10GRCm38
MGSCv37232,643,127 - 32,702,757 (-)NCBIGRCm37mm9NCBIm37
MGSCv36232,609,971 - 32,669,135 (-)NCBImm8
Celera232,494,462 - 32,554,183 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,3-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2-ethoxyethanol  (ISO)
2-methoxyethanol  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acetohydrazide  (EXP)
acetylsalicylic acid  (ISO)
aconitine  (ISO)
Aflatoxin B2 alpha  (ISO)
ammonium chloride  (ISO)
androgen antagonist  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Brodifacoum  (ISO)
Butylparaben  (ISO)
butyric acid  (ISO)
clozapine  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
DDE  (ISO)
decabromodiphenyl ether  (ISO)
deguelin  (ISO)
dibutyl phthalate  (ISO)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzacamene  (ISO)
epoxiconazole  (ISO)
ethanol  (EXP,ISO)
fluoxetine  (ISO)
formaldehyde  (ISO)
furan  (ISO)
gamma-tocopherol  (EXP)
genistein  (ISO)
gentamycin  (ISO)
glycine betaine  (ISO)
heroin  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
linuron  (ISO)
methapyrilene  (ISO)
methoxychlor  (ISO)
methylmercury chloride  (ISO)
orphenadrine  (ISO)
ozone  (ISO)
paracetamol  (ISO)
pentachlorophenol  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
potassium dichromate  (ISO)
prochloraz  (ISO)
procymidone  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (ISO)
sunitinib  (ISO)
tetrahydropalmatine  (ISO)
thioacetamide  (ISO)
tocopherol  (EXP)
trichostatin A  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:7553862   PMID:7598732   PMID:7890599   PMID:7890715   PMID:8769846   PMID:8824310   PMID:9705297   PMID:9817915   PMID:10349636   PMID:10657302   PMID:11042159   PMID:11076861  
PMID:11210178   PMID:11545717   PMID:11566499   PMID:11739749   PMID:11753414   PMID:12297296   PMID:12477932   PMID:12590134   PMID:12887319   PMID:12895513   PMID:12897243   PMID:14610273  
PMID:15123626   PMID:15145078   PMID:15146195   PMID:15182301   PMID:15226823   PMID:15255974   PMID:15489334   PMID:15572149   PMID:15572359   PMID:15659226   PMID:15782199   PMID:15820695  
PMID:15888651   PMID:15897714   PMID:15898951   PMID:15935055   PMID:16141072   PMID:16141073   PMID:16186258   PMID:16512683   PMID:16602821   PMID:16782817   PMID:16902411   PMID:16987237  
PMID:17002520   PMID:17110441   PMID:17114649   PMID:17124501   PMID:17167098   PMID:17259982   PMID:17442248   PMID:17500595   PMID:17634366   PMID:17637832   PMID:17761669   PMID:17803915  
PMID:18614564   PMID:18703708   PMID:19144319   PMID:19170253   PMID:19255244   PMID:19716167   PMID:19723784   PMID:19822743   PMID:20053958   PMID:20114047   PMID:20181595   PMID:20497124  
PMID:20603329   PMID:21690086   PMID:21873635   PMID:22140524   PMID:22261019   PMID:22535313   PMID:22685295   PMID:22765017   PMID:22810233   PMID:23188083   PMID:23484036   PMID:23791195  
PMID:23821748   PMID:23911806   PMID:24012009   PMID:24194600   PMID:24304718   PMID:24520164   PMID:24590174   PMID:25489007   PMID:25664912   PMID:26514267   PMID:26572858   PMID:26628003  
PMID:26758845   PMID:27056679   PMID:27063791   PMID:27358447   PMID:27466336   PMID:28348137   PMID:28634551   PMID:28635948   PMID:28706196   PMID:28821673   PMID:29040524   PMID:29150433  
PMID:29191246   PMID:29217410   PMID:29382714   PMID:29548989   PMID:29599294   PMID:29802938   PMID:30156474   PMID:30266908   PMID:30457570   PMID:30562941   PMID:30721150   PMID:31015467  
PMID:31719162   PMID:31855252   PMID:32027825   PMID:32073399   PMID:32081899   PMID:32141504   PMID:32325033   PMID:32643828   PMID:33259669   PMID:34427183  


Genomics

Comparative Map Data
Stxbp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,677,619 - 32,737,249 (-)NCBIGRCm39mm39
GRCm39 Ensembl232,677,614 - 32,737,257 (-)Ensembl
GRCm38232,787,607 - 32,847,237 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,787,602 - 32,847,245 (-)EnsemblGRCm38mm10GRCm38
MGSCv37232,643,127 - 32,702,757 (-)NCBIGRCm37mm9NCBIm37
MGSCv36232,609,971 - 32,669,135 (-)NCBImm8
Celera232,494,462 - 32,554,183 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
STXBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9127,579,370 - 127,696,027 (+)EnsemblGRCh38hg38GRCh38
GRCh389127,611,912 - 127,696,029 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379130,374,191 - 130,458,308 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369129,414,390 - 129,494,816 (+)NCBINCBI36hg18NCBI36
Build 349127,454,121 - 127,534,549NCBI
Celera9101,025,378 - 101,105,881 (+)NCBI
Cytogenetic Map9q34.11NCBI
HuRef999,990,647 - 100,071,101 (+)NCBIHuRef
CHM1_19130,525,679 - 130,606,190 (+)NCBICHM1_1
Stxbp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2316,076,725 - 16,138,431 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl316,076,391 - 16,138,369 (-)Ensembl
Rnor_6.0311,823,779 - 11,885,479 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl311,823,785 - 11,885,417 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0317,160,752 - 17,221,893 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,762,105 - 11,825,531 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1311,658,476 - 11,721,903 (-)NCBI
Celera310,816,317 - 10,877,576 (-)NCBICelera
RH 3.4 Map379.6RGD
Cytogenetic Map3p11NCBI
Stxbp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955419963,829 - 1,000,759 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955419963,829 - 1,000,759 (-)NCBIChiLan1.0ChiLan1.0
STXBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19127,434,080 - 127,483,971 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9127,434,080 - 127,486,152 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0998,731,527 - 98,811,608 (+)NCBIMhudiblu_PPA_v0panPan3
STXBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1955,690,939 - 55,768,008 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl955,678,264 - 55,727,680 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,884,147 - 54,958,397 (-)NCBI
ROS_Cfam_1.0956,612,796 - 56,687,174 (-)NCBI
UMICH_Zoey_3.1955,372,644 - 55,447,116 (-)NCBI
UNSW_CanFamBas_1.0955,687,749 - 55,761,958 (-)NCBI
UU_Cfam_GSD_1.0955,778,988 - 55,853,304 (-)NCBI
Stxbp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947195,532,283 - 195,598,947 (+)NCBI
SpeTri2.0NW_00493648715,300,758 - 15,367,475 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STXBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1268,116,118 - 268,213,921 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11268,116,124 - 268,205,805 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21302,023,293 - 302,098,188 (+)NCBISscrofa10.2Sscrofa10.2susScr3
STXBP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11210,440,061 - 10,519,798 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1210,439,801 - 10,519,777 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660795,699,673 - 5,781,129 (+)NCBIVero_WHO_p1.0
Stxbp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247607,843,741 - 7,914,444 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
RH136157  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38232,788,285 - 32,788,493UniSTSGRCm38
MGSCv37232,643,805 - 32,644,013UniSTSGRCm37
Celera232,495,140 - 32,495,348UniSTS
Cytogenetic Map2BUniSTS
cM Map224.0UniSTS
AI326233  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38232,789,241 - 32,789,325UniSTSGRCm38
MGSCv37232,644,761 - 32,644,845UniSTSGRCm37
Celera232,496,096 - 32,496,180UniSTS
Cytogenetic Map2BUniSTS
cM Map224.0UniSTS
Whitehead/MRC_RH2539.35UniSTS
D45903  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38232,788,174 - 32,788,278UniSTSGRCm38
MGSCv37232,643,694 - 32,643,798UniSTSGRCm37
Celera232,495,029 - 32,495,133UniSTS
Cytogenetic Map2BUniSTS
cM Map224.0UniSTS
Whitehead/MRC_RH2541.57UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388608993591306Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2778910341789249Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2834628442346384Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2841803942418228Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2949443443494563Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2949443443494563Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212472666726109Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21432455548324701Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220892967119064359Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220892967119064359Mouse
1357829Lvrq1_mliver weight QTL 1 (mouse)Not determined220892967119064359Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220892967119064359Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220892967119064359Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220892967119064359Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220892967119064359Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220892967119064359Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220892967119064359Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220892967119064359Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2123971355239859Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22123971355239859Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22379913357799257Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224334620148858457Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22470000055000000Mouse
8552705Cia25_mcollagen induced arthritis 25 (mouse)Not determined22478910333633160Mouse
8552706Cia24_mcollagen induced arthritis QTL 24 (mouse)Not determined22478910333633160Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22541803957081799Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22713263056506216Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22771204884183040Mouse
14746979Manh51_mmandible shape 51 (mouse)22907111763071117Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22907111763071117Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229417935148533014Mouse
12904008Cfq6_mconditioned fear QTL 6 (mouse)23131302344618192Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31324555105313225Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2371
Count of miRNA genes:532
Interacting mature miRNAs:626
Transcripts:ENSMUST00000050000, ENSMUST00000077458, ENSMUST00000113222
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000050000   ⟹   ENSMUSP00000052440
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,677,614 - 32,737,257 (-)Ensembl
GRCm38.p6 Ensembl232,787,602 - 32,847,245 (-)Ensembl
RefSeq Acc Id: ENSMUST00000077458   ⟹   ENSMUSP00000089051
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,677,973 - 32,737,214 (-)Ensembl
GRCm38.p6 Ensembl232,787,961 - 32,847,202 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113222
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,677,619 - 32,707,202 (-)Ensembl
GRCm38.p6 Ensembl232,787,607 - 32,817,190 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192333
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,706,526 - 32,707,608 (-)Ensembl
GRCm38.p6 Ensembl232,816,514 - 32,817,596 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208840   ⟹   ENSMUSP00000146437
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,707,314 - 32,737,218 (-)Ensembl
GRCm38.p6 Ensembl232,817,302 - 32,847,206 (-)Ensembl
RefSeq Acc Id: NM_001113569   ⟹   NP_001107041
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,677,619 - 32,737,249 (-)NCBI
GRCm38232,787,607 - 32,847,237 (-)ENTREZGENE
MGSCv37232,643,127 - 32,702,757 (-)RGD
Celera232,494,462 - 32,554,183 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009295   ⟹   NP_033321
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,677,619 - 32,737,244 (-)NCBI
GRCm38232,787,607 - 32,847,232 (-)NCBI
MGSCv37232,643,127 - 32,702,757 (-)RGD
Celera232,494,462 - 32,554,183 (-)RGD
cM Map2 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033321   ⟸   NM_009295
- Peptide Label: isoform b
- UniProtKB: O08599 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001107041   ⟸   NM_001113569
- Peptide Label: isoform a
- UniProtKB: O08599 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000146437   ⟸   ENSMUST00000208840
RefSeq Acc Id: ENSMUSP00000052440   ⟸   ENSMUST00000050000
RefSeq Acc Id: ENSMUSP00000089051   ⟸   ENSMUST00000077458

Promoters
RGD ID:6832879
Promoter ID:MM_KWN:28761
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:ENSMUST00000113222
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,672,614 - 32,673,114 (-)MPROMDB
RGD ID:6832881
Promoter ID:MM_KWN:28764
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_001113569,   OTTMUST00000029781
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,702,339 - 32,702,839 (-)MPROMDB
RGD ID:6877050
Promoter ID:EPDNEW_M1976
Type:initiation region
Name:Stxbp1_1
Description:Mus musculus syntaxin binding protein 1 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38232,847,206 - 32,847,266EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107363 AgrOrtholog
Ensembl Genes ENSMUSG00000026797 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000052440 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000089051 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000146437 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000050000 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000077458 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000208840 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1910 UniProtKB/Swiss-Prot
  3.40.50.2060 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.830.10 UniProtKB/Swiss-Prot
InterPro Sec-1-like_dom1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec-1-like_dom2 UniProtKB/Swiss-Prot
  Sec-1-like_dom3a UniProtKB/Swiss-Prot
  Sec1-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sec1-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20910 UniProtKB/Swiss-Prot
MGD MGI:107363 ENTREZGENE
NCBI Gene 20910 ENTREZGENE
PANTHER PTHR11679 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Sec1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Stxbp1 PhenoGen
PIRSF VPS45_Sec1 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56815 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140LHJ4_MOUSE UniProtKB/TrEMBL
  O08599 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A2ARS2 UniProtKB/Swiss-Prot
  A2ARS3 UniProtKB/Swiss-Prot
  A2ARS4 UniProtKB/Swiss-Prot
  Q5WAC6 UniProtKB/Swiss-Prot
  Q8VD51 UniProtKB/Swiss-Prot