Or4a66 (olfactory receptor family 4 subfamily A member 66) - Rat Genome Database

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Gene: Or4a66 (olfactory receptor family 4 subfamily A member 66) Mus musculus
Analyze
No known orthologs.
Symbol: Or4a66
Name: olfactory receptor family 4 subfamily A member 66
RGD ID: 1553006
MGI Page MGI
Description: Predicted to enable olfactory receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane. Predicted to be active in plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GA_x6K02T2Q125-50181139-50180195; MOR225; MOR225-5; olfactory receptor 1196; olfactory receptor MOR225-5; Olfr1196
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39288,530,727 - 88,531,671 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl288,527,647 - 88,534,941 (-)EnsemblGRCm39 Ensembl
GRCm38288,700,383 - 88,701,327 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl288,697,303 - 88,704,597 (-)EnsemblGRCm38mm10GRCm38
MGSCv37288,540,540 - 88,541,484 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36288,501,222 - 88,502,187 (-)NCBIMGSCv36mm8
Celera290,284,901 - 90,285,845 (-)NCBICelera
Cytogenetic Map2DNCBI
cM Map250.0NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Or4a66MouseG protein-coupled receptor signaling pathway acts_upstream_of_or_withinISAprotein_id:BAA861262290270 PMID:14611657MGIPMID:14611657
Or4a66Mousesensory perception of smell acts_upstream_of_or_withinISAprotein_id:BAA861262290270 PMID:14611657MGIPMID:14611657

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Or4a66Mousemembrane located_inISAprotein_id:BAA861262290270 PMID:14611657MGIPMID:14611657
Or4a66Mouseplasma membrane is_active_inIBAPANTHER:PTN008273833 more ...2290270 GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Or4a66Mouseolfactory receptor activity enablesIBAPANTHER:PTN001239295 more ...2290270 GO_CentralGO_REF:0000033
Or4a66Mouseolfactory receptor activity enablesISAprotein_id:BAA861262290270 PMID:14611657MGIPMID:14611657


#
Reference Title
Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
PMID:11802173   PMID:11875048   PMID:14611657   PMID:21873635   PMID:32295537  



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Variants in Or4a66
79 total Variants

Predicted Target Of
Summary Value
Count of predictions:93
Count of miRNA genes:90
Interacting mature miRNAs:93
Transcripts:ENSMUST00000104892
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 49 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1301405Etohr_methanol response acute (mouse)Not determined26300595497006113Mouse
1301660Iba1_minduction of brown adipocytes 1 (mouse)Not determined267647887101648142Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11532731Sluc31a_msusceptibility to lung cancer 31a (mouse)288015003122015170Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301897Scc2_mcolon tumor susceptibility 2 (mouse)Not determined28572426990410991Mouse

1 to 10 of 49 rows
UniSTS:495344  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38288,700,362 - 88,701,394UniSTSGRCm38
MGSCv37288,540,519 - 88,541,551UniSTSGRCm37
Celera290,284,880 - 90,285,912UniSTS
Cytogenetic Map2E1UniSTS







Ensembl Acc Id: ENSMUST00000104892   ⟹   ENSMUSP00000100488
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl288,530,727 - 88,531,671 (-)Ensembl
GRCm38.p6 Ensembl288,700,383 - 88,701,327 (-)Ensembl
Ensembl Acc Id: ENSMUST00000216928   ⟹   ENSMUSP00000149100
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl288,527,647 - 88,534,814 (-)Ensembl
GRCm38.p6 Ensembl288,697,303 - 88,704,470 (-)Ensembl
Ensembl Acc Id: ENSMUST00000216977   ⟹   ENSMUSP00000149902
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl288,527,696 - 88,534,941 (-)Ensembl
GRCm38.p6 Ensembl288,697,352 - 88,704,597 (-)Ensembl
RefSeq Acc Id: NM_146464   ⟹   NP_666675
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39288,530,727 - 88,531,671 (-)NCBI
GRCm38288,700,383 - 88,701,327 (-)ENTREZGENE
MGSCv37288,540,540 - 88,541,484 (-)RGD
Celera290,284,901 - 90,285,845 (-)RGD
cM Map2 ENTREZGENE
Sequence:
Protein RefSeqs NP_666675 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAL61297 (Get FASTA)   NCBI Sequence Viewer  
  AAP71600 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000100488
  ENSMUSP00000100488.2
  ENSMUSP00000149100.2
  ENSMUSP00000149902.2
RefSeq Acc Id: NP_666675   ⟸   NM_146464
- UniProtKB: Q7TR14 (UniProtKB/TrEMBL),   A2AV15 (UniProtKB/TrEMBL),   Q8VFA0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000149902   ⟸   ENSMUST00000216977
Ensembl Acc Id: ENSMUSP00000149100   ⟸   ENSMUST00000216928
Ensembl Acc Id: ENSMUSP00000100488   ⟸   ENSMUST00000104892
G-protein coupled receptors family 1 profile

Name Modeler Protein Id AA Range Protein Structure
AF-Q7TR14-F1-model_v2 AlphaFold Q7TR14 1-314 view protein structure



1 to 25 of 25 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000075120 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000104892 ENTREZGENE
  ENSMUST00000104892.2 UniProtKB/TrEMBL
  ENSMUST00000216928.2 UniProtKB/TrEMBL
  ENSMUST00000216977.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfactory_Receptors UniProtKB/TrEMBL
KEGG Report mmu:258456 UniProtKB/TrEMBL
MGD MGI:3031030 ENTREZGENE
NCBI Gene 258456 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Or4a66 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A2AV15 ENTREZGENE
  Q7TR14 ENTREZGENE, UniProtKB/TrEMBL
  Q8VFA0 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A2AV15 UniProtKB/TrEMBL
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-24 Or4a66  olfactory receptor family 4 subfamily A member 66  Olfr1196  olfactory receptor 1196  Symbol and/or name change 5135510 APPROVED