Astl (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 127,180,559 - 127,199,575 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 127,180,559 - 127,199,571 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 127,338,639 - 127,357,655 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 127,338,639 - 127,357,651 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 127,164,375 - 127,183,387 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 127,030,080 - 127,049,092 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 128,584,628 - 128,599,928 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | F1 | NCBI | | | | | cM Map | 2 | 61.93 | NCBI | | | | |
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ASTL (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 96,122,818 - 96,138,564 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 96,122,818 - 96,138,502 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 96,788,557 - 96,804,241 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 96,153,316 - 96,167,902 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 96,211,462 - 96,226,049 | NCBI | | | | | Celera | 2 | 91,230,396 - 91,244,982 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q11.2 | NCBI | | | | | HuRef | 2 | 90,750,866 - 90,765,452 (-) | NCBI | | HuRef | | | CHM1_1 | 2 | 96,793,916 - 96,808,503 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 96,629,422 - 96,645,168 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Astl (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 135,016,444 - 135,032,177 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 114,563,135 - 114,580,295 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 114,563,135 - 114,578,868 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 118,452,397 - 118,468,141 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 127,047,958 - 127,063,702 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 124,708,329 - 124,724,073 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 119,783,717 - 119,799,450 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 119,783,717 - 119,799,450 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 126,310,094 - 126,325,827 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 114,845,320 - 114,861,053 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 113,402,096 - 113,417,834 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q36 | NCBI | | | | |
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Astl (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955470 | 3,719,254 - 3,732,607 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955470 | 3,719,254 - 3,732,598 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ASTL (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 12 | 32,169,814 - 32,185,721 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 32,172,596 - 32,188,480 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 103,176,662 - 103,192,542 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 97,048,871 - 97,063,747 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 97,049,184 - 97,063,747 (-) | Ensembl | panpan1.1 | | panPan2 | |
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ASTL (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 17 | 34,594,701 - 34,608,708 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 34,594,026 - 34,607,961 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 34,363,562 - 34,378,272 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 35,365,149 - 35,379,752 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 35,365,007 - 35,379,047 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 34,494,438 - 34,509,160 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 34,562,766 - 34,577,482 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 34,769,924 - 34,784,663 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Astl (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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ASTL (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 3 | 47,059,040 - 47,070,664 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 47,058,104 - 47,071,681 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 49,198,467 - 49,211,812 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ASTL (Chlorocebus sabaeus - green monkey) |
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Astl (Heterocephalus glaber - naked mole-rat) |
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