Sh3glb2 (SH3-domain GRB2-like endophilin B2) - Rat Genome Database

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Gene: Sh3glb2 (SH3-domain GRB2-like endophilin B2) Mus musculus
Analyze
Symbol: Sh3glb2
Name: SH3-domain GRB2-like endophilin B2
RGD ID: 1314187
MGI Page MGI
Description: Predicted to enable identical protein binding activity. Predicted to be involved in membrane organization and postsynaptic neurotransmitter receptor internalization. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in glutamatergic synapse; membrane; and postsynaptic endocytic zone. Is expressed in several structures, including central nervous system; dorsal root ganglion; eye; limb; and skeleton. Orthologous to human SH3GLB2 (SH3 domain containing GRB2 like, endophilin B2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: endophilin-B2; mKIAA1848; SH3 domain-containing GRB2-like protein B2; SH3-containing protein SH3GLB2; SPAS-1; stimulator of prostatic adenocarcinoma-specific T-cells-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39230,234,789 - 30,249,380 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl230,234,821 - 30,249,349 (-)EnsemblGRCm39 Ensembl
GRCm38230,344,777 - 30,359,358 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl230,344,809 - 30,359,337 (-)EnsemblGRCm38mm10GRCm38
MGSCv37230,200,329 - 30,214,751 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36230,166,818 - 30,181,240 (-)NCBIMGSCv36mm8
Celera230,049,844 - 30,064,263 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.6NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:16602821   PMID:18303116   PMID:20671748   PMID:21267068   PMID:21677750   PMID:21873635   PMID:28455444   PMID:30562941   PMID:32325033  


Genomics

Comparative Map Data
Sh3glb2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39230,234,789 - 30,249,380 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl230,234,821 - 30,249,349 (-)EnsemblGRCm39 Ensembl
GRCm38230,344,777 - 30,359,358 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl230,344,809 - 30,359,337 (-)EnsemblGRCm38mm10GRCm38
MGSCv37230,200,329 - 30,214,751 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36230,166,818 - 30,181,240 (-)NCBIMGSCv36mm8
Celera230,049,844 - 30,064,263 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.6NCBI
SH3GLB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389129,007,036 - 129,028,331 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9129,007,036 - 129,028,331 (-)EnsemblGRCh38hg38GRCh38
GRCh379131,769,315 - 131,790,610 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369130,810,134 - 130,830,400 (-)NCBINCBI36Build 36hg18NCBI36
Build 349128,849,867 - 128,870,133NCBI
Celera9102,422,625 - 102,442,892 (-)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9101,377,634 - 101,397,864 (-)NCBIHuRef
CHM1_19131,921,341 - 131,941,566 (-)NCBICHM1_1
T2T-CHM13v2.09141,210,470 - 141,231,788 (-)NCBIT2T-CHM13v2.0
Sh3glb2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8334,014,746 - 34,029,607 (-)NCBIGRCr8
mRatBN7.2313,616,936 - 13,631,785 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl313,616,938 - 13,631,757 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx316,688,459 - 16,703,281 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0325,273,425 - 25,288,245 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0323,519,111 - 23,533,963 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.038,909,231 - 8,924,066 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,909,236 - 8,924,032 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0314,262,005 - 14,276,841 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.439,388,827 - 9,403,628 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.139,389,126 - 9,403,928 (-)NCBI
Celera38,383,439 - 8,398,287 (-)NCBICelera
Cytogenetic Map3p12NCBI
Sh3glb2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555701,370,106 - 1,379,408 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555701,370,106 - 1,379,405 (-)NCBIChiLan1.0ChiLan1.0
SH3GLB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21110,324,917 - 10,345,291 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1910,327,264 - 10,347,635 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09100,131,458 - 100,151,869 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19128,791,970 - 128,806,576 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,791,948 - 128,806,578 (-)Ensemblpanpan1.1panPan2
SH3GLB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1954,636,610 - 54,656,724 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl954,635,870 - 54,656,720 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha953,832,165 - 53,852,272 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0955,557,623 - 55,577,763 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl955,557,506 - 55,577,761 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1954,319,184 - 54,339,329 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0954,631,394 - 54,651,531 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0954,724,706 - 54,744,838 (+)NCBIUU_Cfam_GSD_1.0
Sh3glb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947196,695,178 - 196,715,246 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648716,463,666 - 16,474,969 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648716,463,705 - 16,474,699 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SH3GLB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1269,312,825 - 269,332,344 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11269,313,788 - 269,332,351 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21303,329,912 - 303,348,485 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SH3GLB2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,131,906 - 9,149,674 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl129,131,929 - 9,149,032 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666096408,001 - 426,673 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sh3glb2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247606,047,411 - 6,060,425 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247606,047,388 - 6,060,425 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3198
Count of miRNA genes:621
Interacting mature miRNAs:791
Transcripts:ENSMUST00000028214, ENSMUST00000100215, ENSMUST00000113620, ENSMUST00000113621, ENSMUST00000128387, ENSMUST00000139963, ENSMUST00000140801, ENSMUST00000140899, ENSMUST00000142689, ENSMUST00000142720, ENSMUST00000146400, ENSMUST00000151145, ENSMUST00000151354, ENSMUST00000163668
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552706Cia24_mcollagen induced arthritis QTL 24 (mouse)Not determined22467911533523172Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22702264256396228Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
8552705Cia25_mcollagen induced arthritis 25 (mouse)Not determined22467911533523172Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22459001254890012Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22530805156971811Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22112972555129871Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22896112962961129Mouse
12792980Fbmd1_mfemoral bone mineral density 1, females only (mouse)22503449245034492Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21421456748214713Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22368914557689269Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2112972555129871Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001289709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001289710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_139302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_156413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006497937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006497938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006497939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006497941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006497942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004939601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF426314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL954388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY317126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY651947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB249880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX216029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF676083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000028214   ⟹   ENSMUSP00000028214
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,234,821 - 30,249,328 (-)Ensembl
GRCm38.p6 Ensembl230,344,809 - 30,359,316 (-)Ensembl
Ensembl Acc Id: ENSMUST00000100215   ⟹   ENSMUSP00000097788
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,234,821 - 30,249,252 (-)Ensembl
GRCm38.p6 Ensembl230,344,809 - 30,359,240 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113620   ⟹   ENSMUSP00000109250
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,234,823 - 30,249,277 (-)Ensembl
GRCm38.p6 Ensembl230,344,811 - 30,359,265 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113621   ⟹   ENSMUSP00000109251
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,234,823 - 30,249,344 (-)Ensembl
GRCm38.p6 Ensembl230,344,811 - 30,359,332 (-)Ensembl
Ensembl Acc Id: ENSMUST00000128387
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,235,832 - 30,249,349 (-)Ensembl
GRCm38.p6 Ensembl230,345,820 - 30,359,337 (-)Ensembl
Ensembl Acc Id: ENSMUST00000139963
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,239,752 - 30,249,272 (-)Ensembl
GRCm38.p6 Ensembl230,349,740 - 30,359,260 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140801
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,238,080 - 30,245,377 (-)Ensembl
GRCm38.p6 Ensembl230,348,068 - 30,355,365 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140899
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,238,102 - 30,244,892 (-)Ensembl
GRCm38.p6 Ensembl230,348,090 - 30,354,880 (-)Ensembl
Ensembl Acc Id: ENSMUST00000142689
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,235,153 - 30,236,113 (-)Ensembl
GRCm38.p6 Ensembl230,345,141 - 30,346,101 (-)Ensembl
Ensembl Acc Id: ENSMUST00000142720
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,236,120 - 30,237,599 (-)Ensembl
GRCm38.p6 Ensembl230,346,108 - 30,347,587 (-)Ensembl
Ensembl Acc Id: ENSMUST00000146400
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,235,898 - 30,237,668 (-)Ensembl
GRCm38.p6 Ensembl230,345,886 - 30,347,656 (-)Ensembl
Ensembl Acc Id: ENSMUST00000151145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,239,495 - 30,249,257 (-)Ensembl
GRCm38.p6 Ensembl230,349,483 - 30,359,245 (-)Ensembl
Ensembl Acc Id: ENSMUST00000151354
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,235,147 - 30,249,317 (-)Ensembl
GRCm38.p6 Ensembl230,345,135 - 30,359,305 (-)Ensembl
Ensembl Acc Id: ENSMUST00000163668   ⟹   ENSMUSP00000131545
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl230,234,823 - 30,249,301 (-)Ensembl
GRCm38.p6 Ensembl230,344,811 - 30,359,289 (-)Ensembl
RefSeq Acc Id: NM_001289709   ⟹   NP_001276638
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,789 - 30,249,328 (-)NCBI
GRCm38230,344,777 - 30,359,316 (-)NCBI
Celera230,049,812 - 30,064,383 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001289710   ⟹   NP_001276639
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,789 - 30,249,328 (-)NCBI
GRCm38230,344,777 - 30,359,316 (-)NCBI
Celera230,049,812 - 30,064,383 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346806   ⟹   NP_001333735
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,789 - 30,249,328 (-)NCBI
GRCm38230,344,777 - 30,359,316 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362888   ⟹   NP_001349817
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,789 - 30,249,328 (-)NCBI
GRCm38230,344,777 - 30,359,316 (-)NCBI
Sequence:
RefSeq Acc Id: NM_139302   ⟹   NP_647463
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,789 - 30,249,328 (-)NCBI
GRCm38230,344,777 - 30,359,316 (-)NCBI
MGSCv37230,200,329 - 30,214,751 (-)RGD
Celera230,049,812 - 30,064,383 (-)NCBI
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_156413
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,789 - 30,249,328 (-)NCBI
GRCm38230,344,777 - 30,359,316 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006497937   ⟹   XP_006498000
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,370 (-)NCBI
GRCm38230,344,809 - 30,359,358 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006497938   ⟹   XP_006498001
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,370 (-)NCBI
GRCm38230,344,809 - 30,359,358 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006497939   ⟹   XP_006498002
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,370 (-)NCBI
GRCm38230,344,809 - 30,359,358 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006497941   ⟹   XP_006498004
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,360 (-)NCBI
GRCm38230,344,809 - 30,359,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006497942   ⟹   XP_006498005
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,317 (-)NCBI
GRCm38230,344,809 - 30,359,305 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239077   ⟹   XP_011237379
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,370 (-)NCBI
GRCm38230,344,809 - 30,359,358 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239078   ⟹   XP_011237380
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,370 (-)NCBI
GRCm38230,344,809 - 30,359,358 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249870   ⟹   XP_030105730
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,370 (-)NCBI
GRCm38230,344,809 - 30,359,358 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249878   ⟹   XP_030105738
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,317 (-)NCBI
GRCm38230,344,809 - 30,359,305 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249882   ⟹   XP_030105742
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,317 (-)NCBI
GRCm38230,344,809 - 30,359,305 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030249884   ⟹   XP_030105744
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,304 (-)NCBI
GRCm38230,344,809 - 30,359,292 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160832   ⟹   XP_036016725
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,380 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160841   ⟹   XP_036016734
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,380 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160842   ⟹   XP_036016735
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,313 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160844   ⟹   XP_036016737
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,313 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004939601
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39230,234,821 - 30,249,370 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001276638 (Get FASTA)   NCBI Sequence Viewer  
  NP_001276639 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333735 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349817 (Get FASTA)   NCBI Sequence Viewer  
  NP_647463 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498000 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498001 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498002 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498004 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498005 (Get FASTA)   NCBI Sequence Viewer  
  XP_011237379 (Get FASTA)   NCBI Sequence Viewer  
  XP_011237380 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105730 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105738 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105742 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105744 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016725 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016734 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016735 (Get FASTA)   NCBI Sequence Viewer  
  XP_036016737 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH24477 (Get FASTA)   NCBI Sequence Viewer  
  AAH28859 (Get FASTA)   NCBI Sequence Viewer  
  AAL24820 (Get FASTA)   NCBI Sequence Viewer  
  ABV27537 (Get FASTA)   NCBI Sequence Viewer  
  BAC98265 (Get FASTA)   NCBI Sequence Viewer  
  BAE31195 (Get FASTA)   NCBI Sequence Viewer  
  BAE33146 (Get FASTA)   NCBI Sequence Viewer  
  BAE39795 (Get FASTA)   NCBI Sequence Viewer  
  EDL08458 (Get FASTA)   NCBI Sequence Viewer  
  EDL08459 (Get FASTA)   NCBI Sequence Viewer  
  EDL08460 (Get FASTA)   NCBI Sequence Viewer  
  EDL08461 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000028214
  ENSMUSP00000028214.9
  ENSMUSP00000097788
  ENSMUSP00000097788.5
  ENSMUSP00000109250
  ENSMUSP00000109250.4
  ENSMUSP00000109251
  ENSMUSP00000109251.4
  ENSMUSP00000131545
  ENSMUSP00000131545.3
GenBank Protein Q8R3V5 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_647463   ⟸   NM_139302
- Peptide Label: isoform 2
- UniProtKB: B0LDS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498002   ⟸   XM_006497939
- Peptide Label: isoform X3
- UniProtKB: B0LDS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498001   ⟸   XM_006497938
- Peptide Label: isoform X2
- UniProtKB: B0LDS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498000   ⟸   XM_006497937
- Peptide Label: isoform X1
- UniProtKB: B0LDS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006498005   ⟸   XM_006497942
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006498004   ⟸   XM_006497941
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: NP_001276639   ⟸   NM_001289710
- Peptide Label: isoform 3
- UniProtKB: A2AWI9 (UniProtKB/TrEMBL),   B0LDS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001276638   ⟸   NM_001289709
- Peptide Label: isoform 1
- UniProtKB: Q8K140 (UniProtKB/Swiss-Prot),   Q3U824 (UniProtKB/Swiss-Prot),   Q3U2J4 (UniProtKB/Swiss-Prot),   Q3TIQ1 (UniProtKB/Swiss-Prot),   Q91ZI7 (UniProtKB/Swiss-Prot),   Q8R3V5 (UniProtKB/Swiss-Prot),   B0LDS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011237380   ⟸   XM_011239078
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011237379   ⟸   XM_011239077
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: NP_001349817   ⟸   NM_001362888
- Peptide Label: isoform 5
- UniProtKB: B0LDS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001333735   ⟸   NM_001346806
- Peptide Label: isoform 4
- UniProtKB: A2AWI7 (UniProtKB/TrEMBL),   B0LDS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030105730   ⟸   XM_030249870
- Peptide Label: isoform X6
RefSeq Acc Id: XP_030105742   ⟸   XM_030249882
- Peptide Label: isoform X10
RefSeq Acc Id: XP_030105738   ⟸   XM_030249878
- Peptide Label: isoform X9
RefSeq Acc Id: XP_030105744   ⟸   XM_030249884
- Peptide Label: isoform X12
Ensembl Acc Id: ENSMUSP00000131545   ⟸   ENSMUST00000163668
Ensembl Acc Id: ENSMUSP00000109251   ⟸   ENSMUST00000113621
Ensembl Acc Id: ENSMUSP00000109250   ⟸   ENSMUST00000113620
Ensembl Acc Id: ENSMUSP00000028214   ⟸   ENSMUST00000028214
Ensembl Acc Id: ENSMUSP00000097788   ⟸   ENSMUST00000100215
RefSeq Acc Id: XP_036016725   ⟸   XM_036160832
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036016734   ⟸   XM_036160841
- Peptide Label: isoform X11
RefSeq Acc Id: XP_036016737   ⟸   XM_036160844
- Peptide Label: isoform X13
RefSeq Acc Id: XP_036016735   ⟸   XM_036160842
- Peptide Label: isoform X12
Protein Domains
BAR   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8R3V5-F1-model_v2 AlphaFold Q8R3V5 1-400 view protein structure

Promoters
RGD ID:6832700
Promoter ID:MM_KWN:28522
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   Kidney,   Liver
Transcripts:OTTMUST00000040764
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36230,201,196 - 30,202,447 (-)MPROMDB
RGD ID:6832698
Promoter ID:MM_KWN:28523
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain
Transcripts:OTTMUST00000040762,   OTTMUST00000040763
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36230,202,846 - 30,203,897 (-)MPROMDB
RGD ID:6832697
Promoter ID:MM_KWN:28525
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000040760,   OTTMUST00000040761
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36230,210,186 - 30,210,686 (-)MPROMDB
RGD ID:6847697
Promoter ID:MM_ACW:27918
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   Brain
Transcripts:SH3GLB2.FSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36230,213,651 - 30,214,237 (-)MPROMDB
RGD ID:6832699
Promoter ID:MM_KWN:28526
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Lung
Transcripts:OTTMUST00000040709,   OTTMUST00000040710,   OTTMUST00000040712,   OTTMUST00000040757,   OTTMUST00000040758,   OTTMUST00000040759,   OTTMUST00000063695,   UC008JCE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36230,214,339 - 30,214,839 (-)MPROMDB
RGD ID:6876896
Promoter ID:EPDNEW_M1899
Type:initiation region
Name:Sh3glb2_1
Description:Mus musculus SH3-domain GRB2-like endophilin B2 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38230,359,310 - 30,359,370EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2385131 AgrOrtholog
Ensembl Genes ENSMUSG00000026860 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000028214 ENTREZGENE
  ENSMUST00000028214.15 UniProtKB/Swiss-Prot
  ENSMUST00000100215 ENTREZGENE
  ENSMUST00000100215.11 UniProtKB/Swiss-Prot
  ENSMUST00000113620 ENTREZGENE
  ENSMUST00000113620.10 UniProtKB/TrEMBL
  ENSMUST00000113621 ENTREZGENE
  ENSMUST00000113621.10 UniProtKB/TrEMBL
  ENSMUST00000163668 ENTREZGENE
  ENSMUST00000163668.3 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.1270.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 Domains UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AH/BAR_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BAR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Endophilin_B2_SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Endophilin_SH3RF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:227700 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2385131 ENTREZGENE
NCBI Gene 227700 ENTREZGENE
PANTHER DREBRIN-LIKE PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 DOMAIN-CONTAINING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sh3glb2 PhenoGen
PROSITE BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103657 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AWI7 ENTREZGENE, UniProtKB/TrEMBL
  A2AWI9 ENTREZGENE, UniProtKB/TrEMBL
  B0LDS3 ENTREZGENE, UniProtKB/TrEMBL
  Q3TIQ1 ENTREZGENE
  Q3U2J4 ENTREZGENE
  Q3U824 ENTREZGENE
  Q8K140 ENTREZGENE
  Q8R3V5 ENTREZGENE
  Q91ZI7 ENTREZGENE
  SHLB2_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q3TIQ1 UniProtKB/Swiss-Prot
  Q3U2J4 UniProtKB/Swiss-Prot
  Q3U824 UniProtKB/Swiss-Prot
  Q8K140 UniProtKB/Swiss-Prot
  Q91ZI7 UniProtKB/Swiss-Prot