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Gene: Hoxd9 (homeobox D9) Mus musculus
Symbol: Hoxd9
Name: homeobox D9
Description: Exhibits DNA binding activity and DNA-binding transcription factor activity. Involved in several processes, including animal organ development; limb morphogenesis; and regionalization. Localizes to the nucleus. Is expressed in several structures, including embryo mesenchyme; genitourinary system; gut; integumental system; and limb. Orthologous to human HOXD9 (homeobox D9); INTERACTS WITH 1,1-dichloroethene; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: homeo box D9; homeobox protein Hox-4.4; homeobox protein Hox-5.2; homeobox protein Hox-D9; Hox-4.4; Hox-5.2
Homo sapiens (human) : HOXD9 (homeobox D9)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Hoxd9 (homeo box D9)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxd9 (homeobox D9)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXD9 (homeobox D9)
Canis lupus familiaris (dog) : HOXD9 (homeobox D9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxd9 (homeobox D9)
Sus scrofa (pig) : HOXD9 (homeobox D9)
Chlorocebus sabaeus (green monkey) : HOXD9 (homeobox D9)
Heterocephalus glaber (naked mole-rat) : Hoxd9 (homeobox D9)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm38 Ensembl274,697,727 - 74,700,208 (+)Ensembl
GRCm38274,697,763 - 74,700,208 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37274,535,820 - 74,538,265 (+)NCBIGRCm37mm9NCBIm37
MGSCv36274,498,602 - 74,501,047 (+)NCBImm8
Celera276,367,886 - 76,370,331 (+)NCBICelera
Cytogenetic Map2 C3NCBI
cM Map244.13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Hoxd9
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1615190
Created: 2007-04-30
Species: Mus musculus
Last Modified: 2019-11-27
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.