Cia4_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Cia4_m (collagen induced arthritis QTL 4 (mouse)) Mus musculus

Symbol: Cia4_m
Name: collagen induced arthritis QTL 4 (mouse)
RGD ID: 1300671
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39243,520,612 - 77,520,756MOUSEQTLGRCm39
GRCm38243,690,268 - 77,690,412MOUSEQTLGRCm38
MGSCv37224,644,623 - 33,488,680 (+)MOUSEQTLGRCm37
MGSCv3243,078,230 - 79,078,230RGD
cM Map216.73MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
PMID:10051620   PMID:15529344  



1 to 20 of 899 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
737184Kynukynureninase24344527043572734Mouse
329964453LOC131297402STARR-seq mESC enhancer starr_0438624352208243523520Mouse
401837798LOC132408725STARR-positive B cell enhancer ABC_E445124356369243563993Mouse
329967360LOC131297403STARR-seq mESC enhancer starr_0438724357375443574883Mouse
9658740Gm30374predicted gene, 3037424360022243619454Mouse
401836730LOC132408726STARR-positive B cell enhancer ABC_E951324361274843613048Mouse
329964819LOC131297404STARR-seq mESC enhancer starr_0438824362426743626036Mouse
10033957Gm39804predicted gene, 3980424362834743678127Mouse
401837815LOC132408727STARR-positive B cell enhancer ABC_E63624363870343639004Mouse
1618285Arhgap15Rho GTPase activating protein 1524363878644285965Mouse
1608372Arhgap15osRho GTPase activating protein 15, opposite strand24394925043955336Mouse
329965265LOC131297405STARR-seq mESC enhancer starr_0439024398662143987706Mouse
329969197LOC131297406STARR-seq mESC enhancer starr_0439124411160944113057Mouse
15021353Gm52508predicted gene, 5250824421743644218805Mouse
329968037LOC131297407STARR-seq mESC enhancer starr_0439324423046844232686Mouse
401832565LOC132408728STARR-positive B cell enhancer mm9_chr2:44200426-4420072724423491844235219Mouse
10037554Gm39805predicted gene, 3980524432231144352516Mouse
329963673LOC131297408STARR-seq mESC enhancer starr_0439424437277144374062Mouse
10008206Gm39806predicted gene, 3980624438530444391053Mouse
329967779LOC131297409STARR-seq mESC enhancer starr_0439824442768744428794Mouse

1 to 20 of 899 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 85 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
13464141Hbbcq3_mhemoglobin concentration QTL 3 (mouse)25244801986448136Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22702264256396228Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1301402Ap2q_malcohol preference 2 QTL (mouse)Not determined24352061277520756Mouse
4142133Pbwg1.6_mpostnatal body weight growth 1.6 (mouse)Not determined3579732469797406Mouse
1300761Lgth1_mbody length 1 (mouse)Not determined25170327685703425Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
12904008Cfq6_mconditioned fear QTL 6 (mouse)23120303544508204Mouse

1 to 10 of 85 rows


Database
Acc Id
Source(s)
MGD MGI:1333858

Note Type Note Reference