Fbxo3 (F-box protein 3) - Rat Genome Database

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Gene: Fbxo3 (F-box protein 3) Mus musculus
Analyze
Symbol: Fbxo3
Name: F-box protein 3
RGD ID: 1314922
MGI Page MGI
Description: Enables ubiquitin ligase-substrate adaptor activity. Involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytosol and nucleoplasm. Predicted to be part of SCF ubiquitin ligase complex. Predicted to be active in cytoplasm. Orthologous to human FBXO3 (F-box protein 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1200002G09Rik; 1700026K02Rik; AI046358; F-box only protein 3; F-box protein FBA; Fb; Fba
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392103,858,144 - 103,893,582 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2103,858,066 - 103,893,585 (+)EnsemblGRCm39 Ensembl
GRCm382104,027,799 - 104,063,237 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2104,027,721 - 104,063,240 (+)EnsemblGRCm38mm10GRCm38
MGSCv372103,867,956 - 103,903,394 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362103,828,638 - 103,864,076 (+)NCBIMGSCv36mm8
Celera2105,265,922 - 105,300,910 (+)NCBICelera
Cytogenetic Map2E2NCBI
cM Map254.49NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Systematic analysis and nomenclature of mammalian F-box proteins. Jin J, etal., Genes Dev 2004 Nov 1;18(21):2573-80.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:10945468   PMID:11042159   PMID:11076861   PMID:11337588   PMID:12477932   PMID:15489334   PMID:15761153   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:16919269   PMID:21677750   PMID:21873635   PMID:23542741   PMID:24319055   PMID:26745185   PMID:27325702   PMID:27365398   PMID:32325033   PMID:34474245   PMID:36362432  
PMID:38134227  


Genomics

Comparative Map Data
Fbxo3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392103,858,144 - 103,893,582 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2103,858,066 - 103,893,585 (+)EnsemblGRCm39 Ensembl
GRCm382104,027,799 - 104,063,237 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2104,027,721 - 104,063,240 (+)EnsemblGRCm38mm10GRCm38
MGSCv372103,867,956 - 103,903,394 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362103,828,638 - 103,864,076 (+)NCBIMGSCv36mm8
Celera2105,265,922 - 105,300,910 (+)NCBICelera
Cytogenetic Map2E2NCBI
cM Map254.49NCBI
FBXO3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381133,740,944 - 33,774,520 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1133,740,939 - 33,774,543 (-)EnsemblGRCh38hg38GRCh38
GRCh371133,762,490 - 33,796,066 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361133,719,066 - 33,752,647 (-)NCBINCBI36Build 36hg18NCBI36
Build 341133,724,868 - 33,752,647NCBI
Celera1133,909,992 - 33,943,582 (-)NCBICelera
Cytogenetic Map11p13NCBI
HuRef1133,458,657 - 33,492,237 (-)NCBIHuRef
CHM1_11133,762,004 - 33,795,579 (-)NCBICHM1_1
T2T-CHM13v2.01133,877,954 - 33,911,529 (-)NCBIT2T-CHM13v2.0
Fbxo3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83110,872,185 - 110,904,479 (+)NCBIGRCr8
mRatBN7.2390,417,262 - 90,449,557 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl390,417,297 - 90,449,557 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx393,910,311 - 93,942,671 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03102,509,388 - 102,541,746 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03100,339,746 - 100,372,121 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0393,968,827 - 94,000,863 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl393,968,855 - 94,000,863 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03100,608,746 - 100,640,793 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4389,446,724 - 89,479,650 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera389,478,591 - 89,510,807 (+)NCBICelera
Cytogenetic Map3q32NCBI
Fbxo3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542212,461,858 - 12,494,553 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542212,462,329 - 12,492,030 (+)NCBIChiLan1.0ChiLan1.0
FBXO3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2935,960,609 - 35,994,171 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11135,965,323 - 35,998,916 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01133,713,147 - 33,746,730 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11133,594,854 - 33,628,399 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1133,594,854 - 33,628,399 (-)Ensemblpanpan1.1panPan2
FBXO3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11833,944,441 - 33,974,944 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1833,944,451 - 33,973,968 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1833,550,035 - 33,580,545 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01834,555,537 - 34,586,084 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1834,555,537 - 34,594,140 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11834,114,297 - 34,144,819 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01833,707,460 - 33,737,980 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01834,343,094 - 34,373,628 (+)NCBIUU_Cfam_GSD_1.0
Fbxo3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494731,075,996 - 31,108,138 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365334,200,757 - 4,234,145 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365334,200,791 - 4,232,929 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FBXO3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl227,146,444 - 27,184,181 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1227,146,407 - 27,183,496 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2229,513,804 - 29,539,556 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FBXO3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1131,509,950 - 31,543,421 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl131,509,956 - 31,543,611 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038128,605,747 - 128,639,998 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fbxo3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476713,379,895 - 13,410,210 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476713,382,187 - 13,410,143 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fbxo3
1279 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4165
Count of miRNA genes:813
Interacting mature miRNAs:1079
Transcripts:ENSMUST00000028603, ENSMUST00000102565, ENSMUST00000111135, ENSMUST00000111136, ENSMUST00000143799
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300852Lmr14_mleishmaniasis resistance 14 (mouse)Not determined286095716120095823Mouse
1301374Cplaq7_mcircadian period of locomotor activity 7 (mouse)Not determined276421483110421651Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2100942930134943090Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
1301098Cd8mts3_mCD8 memory T cell subset 3 (mouse)Not determined291089974125090104Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1301834Bits1_mbitterness sensitivity 1 (mouse)Not determined287440643121440778Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2100942930134943090Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2100942930134943090Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301909Smdq2_msegregation of mitochondrial DNA QTL 2 (mouse)Not determined292778465126778607Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1558901Skmw8_mskeletal muscle weight 8 (mouse)Not determined284008488118008593Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
4141448Mpaps1_mmicrophthalmia anophthalmia susceptibility 1 (mouse)Not determined97028557112115196Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100824060134824269Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
4142088Parms1_mpatched associated RMS 1 (mouse)Not determined74524117114123532Mouse
4142223Femwf4_mfemur work to failure 4 (mouse)Not determined88143423122143570Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
11038697Ltpr2d_mLeishmania tropica response 2d (mouse)286095716120095823Mouse
11038698Ltpr2c_mLeishmania tropica response 2c (mouse)286095716120095823Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
11041906Lmr28a_mleishmaniasis resistance 28a (mouse)2103095716129213005Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
10043894Bw22_mbody weight QTL 22 (mouse)Not determined280895334114895334Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
11049565Lmr28g_mleishmaniasis resistance 28g (mouse)286095716120095823Mouse
11049568Lmr28c_mleishmaniasis resistance 28c (mouse)297123370131123532Mouse
11049569Lmr28d_mleishmaniasis resistance 28d (mouse)297123370131123532Mouse
11532731Sluc31a_msusceptibility to lung cancer 31a (mouse)288015003122015170Mouse
12904935Edlmmq2_mextensor digitorum longus muscle mass QTL 2 (mouse)297210364131210364Mouse
12904954Gmmq2_mgastrocnemius muscle mass QTL 2 (mouse)297210364131210364Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
15092054Egrme5_mearly growth rate, maternal effect 5 (mouse)282190187118004745Mouse

Markers in Region
01.MMHAP54FLA1.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382104,034,122 - 104,034,310UniSTSGRCm38
MGSCv372103,874,279 - 103,874,467UniSTSGRCm37
Celera2105,272,258 - 105,272,446UniSTS
Cytogenetic Map2E2UniSTS
Whitehead_YAC2 UniSTS
AI046358  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382104,061,128 - 104,061,403UniSTSGRCm38
MGSCv372103,901,285 - 103,901,560UniSTSGRCm37
Celera2105,298,802 - 105,299,077UniSTS
Cytogenetic Map2E2UniSTS
Whitehead/MRC_RH21399.24UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_212433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_149726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF233226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK176959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB470024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE980708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX640578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY105498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000028603   ⟹   ENSMUSP00000028603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,858,066 - 103,893,585 (+)Ensembl
GRCm38.p6 Ensembl2104,027,721 - 104,063,240 (+)Ensembl
RefSeq Acc Id: ENSMUST00000102565   ⟹   ENSMUSP00000099625
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,858,205 - 103,887,849 (+)Ensembl
GRCm38.p6 Ensembl2104,027,860 - 104,057,504 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111135   ⟹   ENSMUSP00000106765
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,858,189 - 103,887,868 (+)Ensembl
GRCm38.p6 Ensembl2104,027,844 - 104,057,523 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111136   ⟹   ENSMUSP00000106766
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,858,191 - 103,893,348 (+)Ensembl
GRCm38.p6 Ensembl2104,027,846 - 104,063,003 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143799
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,858,193 - 103,887,835 (+)Ensembl
GRCm38.p6 Ensembl2104,027,848 - 104,057,490 (+)Ensembl
RefSeq Acc Id: NM_001355504   ⟹   NP_001342433
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,858,144 - 103,893,582 (+)NCBI
GRCm382104,027,799 - 104,063,237 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355505   ⟹   NP_001342434
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,858,144 - 103,887,845 (+)NCBI
GRCm382104,027,799 - 104,057,500 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355506   ⟹   NP_001342435
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,858,144 - 103,887,845 (+)NCBI
GRCm382104,027,799 - 104,057,500 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355507   ⟹   NP_001342436
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,858,144 - 103,893,582 (+)NCBI
GRCm382104,027,799 - 104,063,237 (+)NCBI
Sequence:
RefSeq Acc Id: NM_020593   ⟹   NP_065618
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,858,144 - 103,885,472 (+)NCBI
GRCm382104,027,799 - 104,055,127 (+)NCBI
MGSCv372103,867,956 - 103,903,394 (+)RGD
Celera2105,265,922 - 105,300,910 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_212433   ⟹   NP_997598
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,858,144 - 103,893,582 (+)NCBI
GRCm382104,027,799 - 104,063,237 (+)ENTREZGENE
MGSCv372103,867,956 - 103,903,394 (+)RGD
Celera2105,265,922 - 105,300,910 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_149726
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,858,144 - 103,887,845 (+)NCBI
GRCm382104,027,799 - 104,057,500 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001342433 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342434 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342435 (Get FASTA)   NCBI Sequence Viewer  
  NP_001342436 (Get FASTA)   NCBI Sequence Viewer  
  NP_065618 (Get FASTA)   NCBI Sequence Viewer  
  NP_997598 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF67156 (Get FASTA)   NCBI Sequence Viewer  
  AAH10212 (Get FASTA)   NCBI Sequence Viewer  
  AAH58253 (Get FASTA)   NCBI Sequence Viewer  
  BAB23360 (Get FASTA)   NCBI Sequence Viewer  
  BAB24564 (Get FASTA)   NCBI Sequence Viewer  
  BAB31793 (Get FASTA)   NCBI Sequence Viewer  
  BAC25719 (Get FASTA)   NCBI Sequence Viewer  
  BAC26525 (Get FASTA)   NCBI Sequence Viewer  
  BAC27398 (Get FASTA)   NCBI Sequence Viewer  
  BAC33965 (Get FASTA)   NCBI Sequence Viewer  
  BAC34118 (Get FASTA)   NCBI Sequence Viewer  
  BAE30138 (Get FASTA)   NCBI Sequence Viewer  
  BAE30746 (Get FASTA)   NCBI Sequence Viewer  
  BAE31491 (Get FASTA)   NCBI Sequence Viewer  
  BAE39235 (Get FASTA)   NCBI Sequence Viewer  
  EDL27711 (Get FASTA)   NCBI Sequence Viewer  
  EDL27712 (Get FASTA)   NCBI Sequence Viewer  
  EDL27713 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000028603
  ENSMUSP00000028603.4
  ENSMUSP00000099625
  ENSMUSP00000099625.4
  ENSMUSP00000106765
  ENSMUSP00000106765.2
  ENSMUSP00000106766
  ENSMUSP00000106766.2
GenBank Protein Q9DC63 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_997598   ⟸   NM_212433
- Peptide Label: isoform 1
- UniProtKB: Q9D2J5 (UniProtKB/Swiss-Prot),   Q91VI9 (UniProtKB/Swiss-Prot),   Q8CEJ0 (UniProtKB/Swiss-Prot),   Q8C7I0 (UniProtKB/Swiss-Prot),   Q3U9C1 (UniProtKB/Swiss-Prot),   Q3TKB0 (UniProtKB/Swiss-Prot),   A2BHN7 (UniProtKB/Swiss-Prot),   A2BHN5 (UniProtKB/Swiss-Prot),   Q9JIE4 (UniProtKB/Swiss-Prot),   Q9DC63 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_065618   ⟸   NM_020593
- Peptide Label: isoform 2
- UniProtKB: Q9DC63 (UniProtKB/Swiss-Prot),   Q9CVV6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001342436   ⟸   NM_001355507
- Peptide Label: isoform 6
- UniProtKB: A2BHN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001342433   ⟸   NM_001355504
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001342434   ⟸   NM_001355505
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001342435   ⟸   NM_001355506
- Peptide Label: isoform 5
RefSeq Acc Id: ENSMUSP00000106765   ⟸   ENSMUST00000111135
RefSeq Acc Id: ENSMUSP00000106766   ⟸   ENSMUST00000111136
RefSeq Acc Id: ENSMUSP00000028603   ⟸   ENSMUST00000028603
RefSeq Acc Id: ENSMUSP00000099625   ⟸   ENSMUST00000102565
Protein Domains
ApaG   F-box

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DC63-F1-model_v2 AlphaFold Q9DC63 1-480 view protein structure

Promoters
RGD ID:6831381
Promoter ID:MM_KWN:30812
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   MEF_B4
Transcripts:ENSMUST00000111135,   ENSMUST00000111136,   OTTMUST00000035427,   OTTMUST00000035428,   UC008LJJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362103,867,806 - 103,868,306 (+)MPROMDB
RGD ID:6878090
Promoter ID:EPDNEW_M2496
Type:initiation region
Name:Fbxo3_1
Description:Mus musculus F-box protein 3 , transcript variant 6, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382104,027,860 - 104,027,920EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1929084 AgrOrtholog
Ensembl Genes ENSMUSG00000027180 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000028603 ENTREZGENE
  ENSMUST00000028603.10 UniProtKB/Swiss-Prot
  ENSMUST00000102565 ENTREZGENE
  ENSMUST00000102565.4 UniProtKB/Swiss-Prot
  ENSMUST00000111135 ENTREZGENE
  ENSMUST00000111135.8 UniProtKB/Swiss-Prot
  ENSMUST00000111136 ENTREZGENE
  ENSMUST00000111136.8 UniProtKB/TrEMBL
  ENSMUST00000143799 ENTREZGENE
Gene3D-CATH 1.20.1280.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.1470 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.1580.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ApaG_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ApaG_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  F-box-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  F-box_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Knr4/Smi1-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Knr4/Smi1-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:57443 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1929084 ENTREZGENE
NCBI Gene 57443 ENTREZGENE
PANTHER F-BOX ONLY PROTEIN 3 UniProtKB/Swiss-Prot
  F-BOX ONLY PROTEIN 3 UniProtKB/Swiss-Prot
  F-BOX ONLY PROTEIN 3 UniProtKB/TrEMBL
  F-BOX ONLY PROTEIN 3 UniProtKB/TrEMBL
Pfam DUF525 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  F-box-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SMI1_KNR4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fbxo3 PhenoGen
PROSITE APAG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FBOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FBOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SMI1_KNR4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF110069 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF160631 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF81383 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2BHN5 ENTREZGENE
  A2BHN6 ENTREZGENE, UniProtKB/TrEMBL
  A2BHN7 ENTREZGENE
  FBX3_MOUSE UniProtKB/Swiss-Prot
  Q3TKB0 ENTREZGENE
  Q3U9C1 ENTREZGENE
  Q8C7I0 ENTREZGENE
  Q8CDU1_MOUSE UniProtKB/TrEMBL
  Q8CEJ0 ENTREZGENE
  Q91VI9 ENTREZGENE
  Q9CVV6 ENTREZGENE, UniProtKB/TrEMBL
  Q9D2J5 ENTREZGENE
  Q9DC63 ENTREZGENE
  Q9JIE4 ENTREZGENE
UniProt Secondary A2BHN5 UniProtKB/Swiss-Prot
  A2BHN7 UniProtKB/Swiss-Prot
  Q3TKB0 UniProtKB/Swiss-Prot
  Q3U9C1 UniProtKB/Swiss-Prot
  Q8C7I0 UniProtKB/Swiss-Prot
  Q8CEJ0 UniProtKB/Swiss-Prot
  Q91VI9 UniProtKB/Swiss-Prot
  Q9D2J5 UniProtKB/Swiss-Prot
  Q9JIE4 UniProtKB/Swiss-Prot