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Gene: Gm46736 (predicted gene, 46736) Mus musculus

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Symbol:

Gm46736

Name:

predicted gene, 46736

RGD ID:

12793818

MGI Page

MGI

Description:

Type:

ncrna

RefSeq Status:

MODEL

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	38,217,026 - 38,230,452 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm38	2	38,335,271 - 38,339,210 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
Cytogenetic Map	2	B	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

Genomics

Variants

Variants in Gm46736
543 total Variants

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8552707	Cia23_m	collagen induced arthritis QTL 23 (mouse)			Not determined		2	12129537	66556453	Mouse
12904005	Cfq2_m	conditioned fear QTL 2 (mouse)					2	27022642	56396228	Mouse
14746979	Manh51_m	mandible shape 51 (mouse)					2	28961129	62961129	Mouse
1300624	Insq7_m	insulin QTL 7 (mouse)			Not determined		2	9384446	43384575	Mouse
39128209	Lwq14_m	liver weight QTL 14 (mouse)					2	20897778	118894840	Mouse
1558738	W6q1_m	weight 6 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
4142133	Pbwg1.6_m	postnatal body weight growth 1.6 (mouse)			Not determined			35797324	69797406	Mouse
4141236	Hbnr5_m	Heligmosomoides bakeri nematode resistance 5 (mouse)			Not determined			31214567	105143570	Mouse
26884438	Sklq12_m	skull length QTL 12, 16 week (mouse)					2	24590012	54890012	Mouse
12904008	Cfq6_m	conditioned fear QTL 6 (mouse)					2	31203035	44508204	Mouse
1301790	Pcfm1_m	periosteal circumference and femur length 1 (mouse)			Not determined		2	8236296	42236396	Mouse
1302174	Dssc2_m	dextran sodium sulfate induced colitis QTL2 (mouse)			Not determined		2	24224632	148700377	Mouse
4142130	Pgis2_m	proteoglycan induced spondylitis 2 (mouse)			Not determined		2	25308051	56971811	Mouse
1559001	Eae33_m	experimental allergic encephalomyelitis susceptibility 33 (mouse)			Not determined		2	35991679	71609412	Mouse
1301980	Fcsa5_m	femoral cross-sectional area 5 (mouse)			Not determined		2	7679115	41679261	Mouse
4142447	Pbwg1.7_m	postnatal body weight growth 1.7 (mouse)			Not determined			35797324	69797406	Mouse
1301376	Etohc1_m	ethanol consumption 1 (mouse)			Not determined		2	21129725	55129871	Mouse
1558915	W3q1_m	weight 3 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
14746997	Mancz2_m	mandible centroid size 2 (mouse)					2	28961129	62961129	Mouse
12792980	Fbmd1_m	femoral bone mineral density 1, females only (mouse)					2	25034492	45034492	Mouse
1301769	Orgwq2_m	organ weight QTL 2 (mouse)			Not determined		2	3887126	93421651	Mouse
1301641	Sbmd2_m	spinal bone mineral density 2 (mouse)			Not determined		2	14214567	48214713	Mouse
1357454	Kidq1_m	kidney weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
10755513	Amzn4_m	anatomical modifier of Zfp423 4 (mouse)					2	9384446	43384575	Mouse
10449151	Hdl8_m	high density lipoprotein (HDL) level 8 (mouse)					2	38129725	67072607	Mouse
1558966	W10q9_m	weight 10 weeks QTL 9 (mouse)			Not determined		2	20897778	118894840	Mouse
4141854	T2dm2sa_m	type 2 diabetes mellitus 2 in SMXA RI mice (mouse)			Not determined		2	29307947	148374934	Mouse
10449150	Pvldlc1_m	plasma VLDL-cholesterol 1 (mouse)					2	38129725	67072607	Mouse
13463470	Tubisq1_m	tubulointerstitial injury severity, QTL 1 (mouse)					2	23689145	57689269	Mouse
1558899	Egq1_m	early growth QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1357681	Hrtq1_m	heart weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
10449145	Lanq1_m	lanosterol level QTL 1 (mouse)					2	38129725	67072607	Mouse
1357436	Splq1_m	spleen weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1357881	Estoq1_m	embryo survival total QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
13464253	Ifvrq1_m	influenza virus resistance QTL 1 (mouse)					2	33034492	52034492	Mouse
1300577	Capsq1_m	capsaicin sensitivity related QTL 1 (mouse)			Not determined		2	27602060	84013384	Mouse
4141708	Pbwg1.2_m	postnatal body weight growth 1.2 (mouse)			Not determined			21129725	55129871	Mouse
10043876	Adip22_m	adiposity 22 (mouse)			Not determined		2	8308051	42308240	Mouse
4141186	Pbwg1.8_m	postnatal body weight growth 1.8 (mouse)			Not determined			35797324	69797406	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XR_001783285	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001783286	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004940896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004940897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004940898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AL929186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XR_001783285

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	38,225,283 - 38,229,222 (-)	NCBI
GRCm38	2	38,335,271 - 38,339,210 (-)	NCBI

Sequence:

show sequence

CCGCCCCGTCACTGGCTTCGCCCGCTCCGCTCCCCGTTTGGCTCGGCCCGCCCCCCTCCGTCTC
CCTCCATCCCCGGTGTCTGTCGATCTTCTTGTCTGCTGTCCTCCCCGGATCCCTCCCTGCGTCT
CCAGCTCTTCCTTGCTGCGCCTCTCTTTCCCAAGAGCGTTGAGAGAAGAAAGCAGAACTCAAAT
GAGCCCCGGAGCAGGAGACCTGTGGAGAAGCAAGCAGCAGGCAGAAAGGTCTATAGAGTTCTGG
AGCTCTTCTGTGCCAGCAGCAGCTTCAAAACCGGGATCAGTCTGTCATCTTCTGATCCTCATGT
CCAGAGGCAGCAAGGGTCTTTCTAACCCTCAGCTTCTTCTGATTTTTGGAATCCAGATTTGGTT
TTTGGATGTTCATCAAGAGGCTGGCTCCGTGAATTTTAATTAAGCTGTCTCCCCCCCCCCATTT
ATTACTAATACACTCCTCTTAACTATGATTTATTTGTTAAACAAAGCACCATAAGCCGTCACTT
ATTCATCTTAATTTCAACAAAATTAAAGTAGTCGCTGTTAGATTGCACCTAATTGCACTTGCAA
TGAAAAGAACGGAGATGTTAATCAAAATAAATTGAAGATAAACAATAAAATCATTACATCTTGC
GACGGTAAGTGTAACTAATCAGTTTTGACTCGAAGCGACTGAACAGGAATAATGAATGTGCCAC
CGAAGGCTGGTTCATTAAGAGAAGCCACAGAGACCTGGTCCTTGGGGCAACAGACAGACACCCT
GCCAATGTGGCCCTAAGGGTTCTTGCCCCCTGGTTGGGCAAAGGGGCTCTAAGGAGCAATGGGA
GCTAGTGGGTAGCTCTCAGGAGGGATGTCATGGGTAGAAGGGCTCAGAAGCTGCCCTGCCACAG
AAGGATTCTCTCATTCTGTTAAGGCAGCAAGAAATCCCGTGCTCATTCCTGGACATGCCAGGTA
ACCATGAAAAGAGCAAGTTGAGTTGAGAGACAGACAGACAACAGCTCTGCCAAGGACACAGAGA
AAGACACACCCCAGGGGATGTAGTAGAGAAGAAGGACAGGCAGATGGAGTCTAGGAGAAAGAAA
GAAATGGAAATAGAAAGGACCATGAGAAGAAAGAGAAACTGAGGCATCCCCTGTACTCCCTGGG
AGTGAGGGGAGGAAAGAAGCAGGTGGCTCTGCACAAATGGAGGCAAATGGAGACAGAGCTCAGG
AAGTCTCAAAATCCCAGAGTCCTCAGGAGTCCAGGCAGGCACCTGACTTCTGGGGATGAGACCA
CAGAGGGATGCTAAGGATCCCTAAGTGAAGAGACAGGAGCATATACCTCACAGAGGCCCTATAC
TGGGGCCTTTCCTCAAGGCATGTGGATATGACAGCAGAACCAGAGAGAGGCCAGCTTGCATTGA
AAACCCCCTATGTTGC

hide sequence

RefSeq Acc Id:

XR_001783286

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	38,225,283 - 38,229,150 (-)	NCBI
GRCm38	2	38,335,271 - 38,339,210 (-)	NCBI

Sequence:

show sequence

CCCGGTGTCTGTCGATCTTCTTGTCTGCTGTCCTCCCCGGATCCCTCCCTGCGTCTCCAGCTCT
TCCTTGCTGCGCCTCTCTTTCCCAAGAGCGTTGAGAGAAGAAAGCAGAACTCAAATGAGCCCCG
GAGCAGGAGACCTGTGGAGAAGCAAGCAGCAGGCAGAAAGGTCTATAGAGTTCTGGAGCTCTTC
TGTGCCAGCAGCTTCAAAACCGGGATCAGTCTGTCATCTTCTGATCCTCATGTCCAGAGGCAGC
AAGGGTCTTTCTAACCCTCAGCTTCTTCTGATTTTTGGAATCCAGATTTGGTTTTTGGATGTTC
ATCAAGAGGCTGGCTCCGTGAATTTTAATTAAGCTGTCTCCCCCCCCCCATTTATTACTAATAC
ACTCCTCTTAACTATGATTTATTTGTTAAACAAAGCACCATAAGCCGTCACTTATTCATCTTAA
TTTCAACAAAATTAAAGTAGTCGCTGTTAGATTGCACCTAATTGCACTTGCAATGAAAAGAACG
GAGATGTTAATCAAAATAAATTGAAGATAAACAATAAAATCATTACATCTTGCGACGGTAAGTG
TAACTAATCAGTTTTGACTCGAAGCGACTGAACAGGAATAATGAATGTGCCACCGAAGGCTGGT
TCATTAAGAGAAGCCACAGAGACCTGGTCCTTGGGGCAACAGACAGACACCCTGCCAATGTGGC
CCTAAGGGTTCTTGCCCCCTGGTTGGGCAAAGGGGCTCTAAGGAGCAATGGGAGCTAGTGGGTA
GCTCTCAGGAGGGATGTCATGGGTAGAAGGGCTCAGAAGCTGCCCTGCCACAGAAGGATTCTCT
CATTCTGTTAAGGCAGCAAGAAATCCCGTGCTCATTCCTGGACATGCCAGGTAACCATGAAAAG
AGCAAGTTGAGTTGAGAGACAGACAGACAACAGCTCTGCCAAGGACACAGAGAAAGACACACCC
CAGGGGATGTAGTAGAGAAGAAGGACAGGCAGATGGAGTCTAGGAGAAAGAAAGAAATGGAAAT
AGAAAGGACCATGAGAAGAAAGAGAAACTGAGGCATCCCCTGTACTCCCTGGGAGTGAGGGGAG
GAAAGAAGCAGGTGGCTCTGCACAAATGGAGGCAAATGGAGACAGAGCTCAGGAAGTCTCAAAA
TCCCAGAGTCCTCAGGAGTCCAGGCAGGCACCTGACTTCTGGGGATGAGACCACAGAGGGATGC
TAAGGATCCCTAAGTGAAGAGACAGGAGCATATACCTCACAGAGGCCCTATACTGGGGCCTTTC
CTCAAGGCATGTGGATATGACAGCAGAACCAGAGAGAGGCCAGCTTGCATTGAAAACCCCCTAT
GTTGC

hide sequence

RefSeq Acc Id:

XR_004940896

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	38,217,026 - 38,229,150 (-)	NCBI

Sequence:

show sequence

CCCGGTGTCTGTCGATCTTCTTGTCTGCTGTCCTCCCCGGATCCCTCCCTGCGTCTCCAGCTCT
TCCTTGCTGCGCCTCTCTTTCCCAAGAGCGTTGAGAGAAGAAAGCAGAACTCAAATGAGCCCCG
GAGCAGGAGACCTGTGGAGAAGCAAGCAGCAGGCAGAAAGGTCTATAGAGTTCTGGAGCTCTTC
TGTGCCAGTGTGTTACATGTCTACAATGAAACGCCGCAAACCTCTCCTTCAGGTGGCCAGAGAG
CACTTTGTTTGGGAGCAAAGAGAACCTCTGGATTCGGCTC

hide sequence

RefSeq Acc Id:

XR_004940897

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	38,225,283 - 38,230,452 (-)	NCBI

Sequence:

show sequence

CAGAGATGGACTTGTGGTACCCAGCTTTGAGTGAGAAGTATCTCTGCGTTGCCTCCACACCAGT
AAAAACACCAGGTCTCCTGTCCTGAGTTAAAGAACTGCACATAATTAAGTGGGGGAAAGGGACA
ACAGAAAAGCTCCTTCAATGGGAGGGTGCTACTGGACTTCGATGGTTGTAAATTGTGGGTAGAG
AGAAAATCTTTGTAAATTGAGGAGTGAGAAAGAGGGAACAACCTCTTCTAAATTGAAAGAGAAA
ATAGGCTTGTTTGGGAAGACGAATAGAAACCTATTTCTTGTTCAGGAAAAGGGGATGAAATGGG
ATGATTCCTCTAAAGAGACATCAGGAAATGATGTTTAGAGACTGAAAGAGGATAGTGAGAGAGA
ATTCCTTAAAAGAAATGGATACTAGAACTCCGTATCCAAAAGCCAGACTCTCCTCGCCCAGGAC
TGGAAGACTGAGCGTTGAGAGAAGAAAGCAGAACTCAAATGAGCCCCGGAGCAGGAGACCTGTG
GAGAAGCAAGCAGCAGGCAGAAAGGTCTATAGAGTTCTGGAGCTCTTCTGTGCCAGCAGCAGCT
TCAAAACCGGGATCAGTCTGTCATCTTCTGATCCTCATGTCCAGAGGCAGCAAGGGTCTTTCTA
ACCCTCAGCTTCTTCTGATTTTTGGAATCCAGATTTGGTTTTTGGATGTTCATCAAGAGGCTGG
CTCCGTGAATTTTAATTAAGCTGTCTCCCCCCCCCCATTTATTACTAATACACTCCTCTTAACT
ATGATTTATTTGTTAAACAAAGCACCATAAGCCGTCACTTATTCATCTTAATTTCAACAAAATT
AAAGTAGTCGCTGTTAGATTGCACCTAATTGCACTTGCAATGAAAAGAACGGAGATGTTAATCA
AAATAAATTGAAGATAAACAATAAAATCATTACATCTTGCGACGGTAAGTGTAACTAATCAGTT
TTGACTCGAAGCGACTGAACAGGAATAATGAATGTGCCACCGAAGGCTGGTTCATTAAGAGAAG
CCACAGAGACCTGGTCCTTGGGGCAACAGACAGACACCCTGCCAATGTGGCCCTAAGGGTTCTT
GCCCCCTGGTTGGGCAAAGGGGCTCTAAGGAGCAATGGGAGCTAGTGGGTAGCTCTCAGGAGGG
ATGTCATGGGTAGAAGGGCTCAGAAGCTGCCCTGCCACAGAAGGATTCTCTCATTCTGTTAAGG
CAGCAAGAAATCCCGTGCTCATTCCTGGACATGCCAGGTAACCATGAAAAGAGCAAGTTGAGTT
GAGAGACAGACAGACAACAGCTCTGCCAAGGACACAGAGAAAGACACACCCCAGGGGATGTAGT
AGAGAAGAAGGACAGGCAGATGGAGTCTAGGAGAAAGAAAGAAATGGAAATAGAAAGGACCATG
AGAAGAAAGAGAAACTGAGGCATCCCCTGTACTCCCTGGGAGTGAGGGGAGGAAAGAAGCAGGT
GGCTCTGCACAAATGGAGGCAAATGGAGACAGAGCTCAGGAAGTCTCAAAATCCCAGAGTCCTC
AGGAGTCCAGGCAGGCACCTGACTTCTGGGGATGAGACCACAGAGGGATGCTAAGGATCCCTAA
GTGAAGAGACAGGAGCATATACCTCACAGAGGCCCTATACTGGGGCCTTTCCTCAAGGCATGTG
GATATGACAGCAGAACCAGAGAGAGGCCAGCTTGCATTGAAAACCCCCTATGTTGC

hide sequence

RefSeq Acc Id:

XR_004940898

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	38,225,283 - 38,230,452 (-)	NCBI

Sequence:

show sequence

CAGAGATGGACTTGTGGTACCCAGCTTTGAGTGAGAAGTATCTCTGCGTTGCCTCCACACCAGT
AAAAACACCAGGTCTCCTGTCCTGAGTTAAAGAACTGCACATAATTAAGTGGGGGAAAGGGACA
ACAGAAAAGCTCCTTCAATGGGAGGGTGCTACTGGACTTCGATGGTTGTAAATTGTGGGTAGAG
AGAAAATCTTTGTAAATTGAGGAGTGAGAAAGAGGGAACAACCTCTTCTAAATTGAAAGAGAAA
ATAGGCTTGTTTGGGAAGACGAATAGAAACCTATTTCTTGTTCAGGAAAAGGGGATGAAATGGG
ATGATTCCTCTAAAGAGACATCAGGAAATGATGTTTAGAGACTGAAAGAGGATAGTGAGAGAGA
ATTCCTTAAAAGAAATGGATACTAGAACTCCGTATCCAAAAGCCAGACTCTCCTCGCCCAGGAC
TGGAAGACTGAGCGTTGAGAGAAGAAAGCAGAACTCAAATGAGCCCCGGAGCAGGAGACCTGTG
GAGAAGCAAGCAGCAGGCAGAAAGGTCTATAGAGTTCTGGAGCTCTTCTGTGCCAGCAGCTTCA
AAACCGGGATCAGTCTGTCATCTTCTGATCCTCATGTCCAGAGGCAGCAAGGGTCTTTCTAACC
CTCAGCTTCTTCTGATTTTTGGAATCCAGATTTGGTTTTTGGATGTTCATCAAGAGGCTGGCTC
CGTGAATTTTAATTAAGCTGTCTCCCCCCCCCCATTTATTACTAATACACTCCTCTTAACTATG
ATTTATTTGTTAAACAAAGCACCATAAGCCGTCACTTATTCATCTTAATTTCAACAAAATTAAA
GTAGTCGCTGTTAGATTGCACCTAATTGCACTTGCAATGAAAAGAACGGAGATGTTAATCAAAA
TAAATTGAAGATAAACAATAAAATCATTACATCTTGCGACGGTAAGTGTAACTAATCAGTTTTG
ACTCGAAGCGACTGAACAGGAATAATGAATGTGCCACCGAAGGCTGGTTCATTAAGAGAAGCCA
CAGAGACCTGGTCCTTGGGGCAACAGACAGACACCCTGCCAATGTGGCCCTAAGGGTTCTTGCC
CCCTGGTTGGGCAAAGGGGCTCTAAGGAGCAATGGGAGCTAGTGGGTAGCTCTCAGGAGGGATG
TCATGGGTAGAAGGGCTCAGAAGCTGCCCTGCCACAGAAGGATTCTCTCATTCTGTTAAGGCAG
CAAGAAATCCCGTGCTCATTCCTGGACATGCCAGGTAACCATGAAAAGAGCAAGTTGAGTTGAG
AGACAGACAGACAACAGCTCTGCCAAGGACACAGAGAAAGACACACCCCAGGGGATGTAGTAGA
GAAGAAGGACAGGCAGATGGAGTCTAGGAGAAAGAAAGAAATGGAAATAGAAAGGACCATGAGA
AGAAAGAGAAACTGAGGCATCCCCTGTACTCCCTGGGAGTGAGGGGAGGAAAGAAGCAGGTGGC
TCTGCACAAATGGAGGCAAATGGAGACAGAGCTCAGGAAGTCTCAAAATCCCAGAGTCCTCAGG
AGTCCAGGCAGGCACCTGACTTCTGGGGATGAGACCACAGAGGGATGCTAAGGATCCCTAAGTG
AAGAGACAGGAGCATATACCTCACAGAGGCCCTATACTGGGGCCTTTCCTCAAGGCATGTGGAT
ATGACAGCAGAACCAGAGAGAGGCCAGCTTGCATTGAAAACCCCCTATGTTGC

hide sequence

Additional Information

External Database Links

Database	Acc Id	Source(s)
MGD	MGI:5826373	ENTREZGENE
NCBI Gene	Gm46736	ENTREZGENE
PhenoGen	Gm46736	PhenoGen

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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