Pkn3 (protein kinase N3) - Rat Genome Database

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Gene: Pkn3 (protein kinase N3) Mus musculus
Analyze
Symbol: Pkn3
Name: protein kinase N3
RGD ID: 1314241
MGI Page MGI
Description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in epithelial cell migration and intracellular signal transduction. Predicted to be located in nucleus and perinuclear region of cytoplasm. Is expressed in several structures, including genitourinary system; heart; respiratory system; submandibular gland; and vascular system. Orthologous to human PKN3 (protein kinase N3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AW209115; BC034126; MGC31699; protein kinase PKN-beta; protein kinase PKNbeta; protein-kinase C-related kinase 3; serine/threonine-protein kinase N3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39229,967,657 - 29,981,031 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl229,967,696 - 29,981,034 (+)EnsemblGRCm39 Ensembl
GRCm38230,077,548 - 30,091,023 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl230,077,684 - 30,091,022 (+)EnsemblGRCm38mm10GRCm38
MGSCv37229,934,286 - 29,946,539 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36229,900,775 - 29,913,028 (+)NCBIMGSCv36mm8
Celera229,782,278 - 29,794,536 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15282551   PMID:15489334   PMID:16141072   PMID:16141073   PMID:18799693  
PMID:21267068   PMID:21873635   PMID:22217540   PMID:24194600   PMID:25234167   PMID:26742562   PMID:26774483   PMID:28851822   PMID:30422386   PMID:32325033   PMID:35364055   PMID:38355793  


Genomics

Comparative Map Data
Pkn3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39229,967,657 - 29,981,031 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl229,967,696 - 29,981,034 (+)EnsemblGRCm39 Ensembl
GRCm38230,077,548 - 30,091,023 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl230,077,684 - 30,091,022 (+)EnsemblGRCm38mm10GRCm38
MGSCv37229,934,286 - 29,946,539 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36229,900,775 - 29,913,028 (+)NCBIMGSCv36mm8
Celera229,782,278 - 29,794,536 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.13NCBI
PKN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389128,702,503 - 128,720,916 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9128,702,503 - 128,720,916 (+)EnsemblGRCh38hg38GRCh38
GRCh379131,464,782 - 131,483,195 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369130,504,623 - 130,523,020 (+)NCBINCBI36Build 36hg18NCBI36
Build 349128,544,355 - 128,562,752NCBI
Celera9102,115,606 - 102,133,985 (+)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9101,074,402 - 101,092,860 (+)NCBIHuRef
CHM1_19131,615,771 - 131,634,165 (+)NCBICHM1_1
T2T-CHM13v2.09140,907,265 - 140,925,683 (+)NCBIT2T-CHM13v2.0
Pkn3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8333,747,610 - 33,761,405 (+)NCBIGRCr8
mRatBN7.2313,350,082 - 13,363,572 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl313,335,041 - 13,363,567 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx316,425,355 - 16,438,238 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0325,010,321 - 25,023,204 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0323,261,006 - 23,273,794 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.038,628,033 - 8,656,464 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,628,033 - 8,659,117 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0313,979,910 - 14,008,622 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.439,068,176 - 9,096,114 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.139,083,046 - 9,096,433 (+)NCBI
Celera38,109,358 - 8,136,810 (+)NCBICelera
Cytogenetic Map3p12NCBI
Pkn3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555701,121,803 - 1,133,280 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555701,121,803 - 1,131,296 (+)NCBIChiLan1.0ChiLan1.0
PKN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21110,629,789 - 10,648,482 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1910,632,138 - 10,653,781 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0999,825,546 - 99,844,582 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19128,492,598 - 128,510,790 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,493,251 - 128,510,476 (+)Ensemblpanpan1.1panPan2
PKN3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1954,880,654 - 54,891,474 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl954,879,806 - 54,891,358 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,076,073 - 54,085,963 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0955,801,720 - 55,811,613 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl955,801,578 - 55,812,427 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1954,562,165 - 54,572,228 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0954,874,957 - 54,884,853 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0954,968,478 - 54,978,366 (-)NCBIUU_Cfam_GSD_1.0
Pkn3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947196,421,900 - 196,432,822 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648716,190,519 - 16,203,858 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648716,191,953 - 16,201,349 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PKN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1269,070,512 - 269,081,334 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11269,069,088 - 269,081,334 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21303,092,940 - 303,105,193 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PKN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,423,039 - 9,440,783 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl129,423,354 - 9,440,463 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366609627,902 - 44,948 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pkn3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247606,277,005 - 6,285,744 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247606,276,714 - 6,286,861 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1332
Count of miRNA genes:587
Interacting mature miRNAs:728
Transcripts:ENSMUST00000045246, ENSMUST00000125346, ENSMUST00000126838, ENSMUST00000134591, ENSMUST00000137240, ENSMUST00000148650, ENSMUST00000150770, ENSMUST00000156197
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552706Cia24_mcollagen induced arthritis QTL 24 (mouse)Not determined22467911533523172Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22702264256396228Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
8552705Cia25_mcollagen induced arthritis 25 (mouse)Not determined22467911533523172Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22459001254890012Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22530805156971811Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22112972555129871Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22896112962961129Mouse
12792980Fbmd1_mfemoral bone mineral density 1, females only (mouse)22503449245034492Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21421456748214713Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22368914557689269Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2112972555129871Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse

Markers in Region
AW209115  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38230,090,805 - 30,090,928UniSTSGRCm38
MGSCv37229,946,325 - 29,946,448UniSTSGRCm37
Celera229,794,322 - 29,794,445UniSTS
Cytogenetic Map2BUniSTS
Whitehead/MRC_RH2479.19UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_153805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006498054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC091519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX005298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000045246   ⟹   ENSMUSP00000041025
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl229,968,596 - 29,981,031 (+)Ensembl
GRCm38.p6 Ensembl230,078,584 - 30,091,019 (+)Ensembl
Ensembl Acc Id: ENSMUST00000125346   ⟹   ENSMUSP00000120268
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl229,967,696 - 29,971,137 (+)Ensembl
GRCm38.p6 Ensembl230,077,684 - 30,081,125 (+)Ensembl
Ensembl Acc Id: ENSMUST00000126838
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl229,970,863 - 29,973,233 (+)Ensembl
GRCm38.p6 Ensembl230,080,851 - 30,083,221 (+)Ensembl
Ensembl Acc Id: ENSMUST00000134591
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl229,968,710 - 29,975,559 (+)Ensembl
GRCm38.p6 Ensembl230,078,698 - 30,085,547 (+)Ensembl
Ensembl Acc Id: ENSMUST00000137240
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl229,968,766 - 29,981,034 (+)Ensembl
GRCm38.p6 Ensembl230,078,754 - 30,091,022 (+)Ensembl
Ensembl Acc Id: ENSMUST00000148650
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl229,967,755 - 29,981,025 (+)Ensembl
GRCm38.p6 Ensembl230,077,743 - 30,091,013 (+)Ensembl
Ensembl Acc Id: ENSMUST00000150770   ⟹   ENSMUSP00000114492
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl229,968,225 - 29,969,994 (+)Ensembl
GRCm38.p6 Ensembl230,078,213 - 30,079,982 (+)Ensembl
Ensembl Acc Id: ENSMUST00000156197
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl229,974,665 - 29,977,048 (+)Ensembl
GRCm38.p6 Ensembl230,084,653 - 30,087,036 (+)Ensembl
RefSeq Acc Id: NM_153805   ⟹   NP_722500
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,968,710 - 29,981,031 (+)NCBI
GRCm38230,078,698 - 30,091,019 (+)NCBI
MGSCv37229,934,286 - 29,946,539 (+)RGD
Celera229,782,278 - 29,794,536 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006498052   ⟹   XP_006498115
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,968,207 - 29,981,026 (+)NCBI
GRCm38230,078,197 - 30,091,023 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006498053   ⟹   XP_006498116
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,967,665 - 29,981,026 (+)NCBI
GRCm38230,077,555 - 30,091,023 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006498054   ⟹   XP_006498117
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,968,428 - 29,981,026 (+)NCBI
GRCm38230,078,413 - 30,091,023 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030251557   ⟹   XP_030107417
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,968,203 - 29,981,026 (+)NCBI
GRCm38230,078,194 - 30,091,023 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030251558   ⟹   XP_030107418
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,967,657 - 29,981,026 (+)NCBI
GRCm38230,077,548 - 30,091,023 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030251559   ⟹   XP_030107419
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,967,868 - 29,981,026 (+)NCBI
GRCm38230,077,855 - 30,091,023 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030251560   ⟹   XP_030107420
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,968,423 - 29,981,026 (+)NCBI
GRCm38230,078,408 - 30,091,023 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030251561   ⟹   XP_030107421
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39229,968,180 - 29,977,137 (+)NCBI
GRCm38230,078,169 - 30,087,127 (+)NCBI
Sequence:
RefSeq Acc Id: NP_722500   ⟸   NM_153805
- UniProtKB: Q8K045 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006498116   ⟸   XM_006498053
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006498115   ⟸   XM_006498052
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006498117   ⟸   XM_006498054
- Peptide Label: isoform X7
- UniProtKB: Q3UQS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030107418   ⟸   XM_030251558
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030107419   ⟸   XM_030251559
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030107421   ⟸   XM_030251561
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030107417   ⟸   XM_030251557
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030107420   ⟸   XM_030251560
- Peptide Label: isoform X4
Ensembl Acc Id: ENSMUSP00000114492   ⟸   ENSMUST00000150770
Ensembl Acc Id: ENSMUSP00000120268   ⟸   ENSMUST00000125346
Ensembl Acc Id: ENSMUSP00000041025   ⟸   ENSMUST00000045246
Protein Domains
AGC-kinase C-terminal   Protein kinase   REM-1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8K045-F1-model_v2 AlphaFold Q8K045 1-878 view protein structure

Promoters
RGD ID:6832061
Promoter ID:MM_KWN:28492
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000113688,   ENSMUST00000113692,   OTTMUST00000040621,   OTTMUST00000040622,   OTTMUST00000040623,   OTTMUST00000040625,   OTTMUST00000040626,   UC008JAZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36229,932,901 - 29,933,962 (+)MPROMDB
RGD ID:6832060
Promoter ID:MM_KWN:28494
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:OTTMUST00000040628
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36229,939,534 - 29,940,034 (+)MPROMDB
RGD ID:6876866
Promoter ID:EPDNEW_M1884
Type:initiation region
Name:Pkn3_1
Description:Mus musculus protein kinase N3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1885  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38230,077,712 - 30,077,772EPDNEW
RGD ID:6876868
Promoter ID:EPDNEW_M1885
Type:initiation region
Name:Pkn3_2
Description:Mus musculus protein kinase N3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1884  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38230,078,725 - 30,078,785EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2388285 AgrOrtholog
Ensembl Genes ENSMUSG00000026785 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000045246 ENTREZGENE
  ENSMUST00000045246.8 UniProtKB/Swiss-Prot
  ENSMUST00000125346.8 UniProtKB/TrEMBL
  ENSMUST00000137240 ENTREZGENE
  ENSMUST00000150770.8 UniProtKB/TrEMBL
Gene3D-CATH HR1 repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AGC-kinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HR1_rho-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HR1_rpt_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PKN_HR1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:263803 UniProtKB/Swiss-Prot
MGD MGI:2388285 ENTREZGENE
NCBI Gene 263803 ENTREZGENE
PANTHER PROTEIN KINASE C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIBOSOMAL PROTEIN S6 KINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pkn3 PhenoGen
PROSITE AGC_KINASE_CTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  REM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Hr1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  S_TK_X UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46585 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49562 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2BE96_MOUSE UniProtKB/TrEMBL
  A2BE97_MOUSE UniProtKB/TrEMBL
  PKN3_MOUSE UniProtKB/Swiss-Prot
  Q3UQS3 ENTREZGENE, UniProtKB/TrEMBL
  Q8K045 ENTREZGENE