Gm14138 (predicted gene 14138) - Rat Genome Database

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Gene: Gm14138 (predicted gene 14138) Mus musculus
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Symbol: Gm14138
Name: predicted gene 14138
RGD ID: 2295323
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Rps6  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392119,017,975 - 119,018,780 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2119,017,998 - 119,018,742 (+)EnsemblGRCm39 Ensembl
GRCm382119,187,494 - 119,188,299 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2119,187,517 - 119,188,261 (+)EnsemblGRCm38mm10GRCm38
MGSCv372119,013,253 - 119,013,994 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362118,878,935 - 118,879,750 (+)NCBIMGSCv36mm8
MGSCv362120,134,393 - 120,135,208 (+)NCBIMGSCv36mm8
Celera2120,337,962 - 120,338,708 (+)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.97NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm14138
90 total Variants

Predicted Target Of
Summary Value
Count of predictions:59
Count of miRNA genes:59
Interacting mature miRNAs:59
Transcripts:ENSMUST00000122061
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 59 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
12904007Cfq7_mconditioned fear QTL 7 (mouse)2118356772125048872Mouse
13506762Tbvq2_mtrabecular bone volume QTL 2 (mouse)2115430481124741920Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1301909Smdq2_msegregation of mitochondrial DNA QTL 2 (mouse)Not determined292778465126778607Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112212746146213005Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115212857149212994Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse

1 to 10 of 59 rows





RefSeq Transcripts NG_017644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL772264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000122061
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2119,017,998 - 119,018,742 (+)Ensembl
GRCm38.p6 Ensembl2119,187,517 - 119,188,261 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000081572 Ensembl, ENTREZGENE
MGD MGI:3649496 ENTREZGENE
NCBI Gene 545640 ENTREZGENE
PhenoGen Gm14138 PhenoGen