1810024B03Rik (RIKEN cDNA 1810024B03 gene) - Rat Genome Database

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Gene: 1810024B03Rik (RIKEN cDNA 1810024B03 gene) Mus musculus
Analyze
No known orthologs.
Symbol: 1810024B03Rik
Name: RIKEN cDNA 1810024B03 gene
RGD ID: 1313788
MGI Page MGI
Description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and negative regulation of glycogen biosynthetic process. Predicted to be active in cytosol and nucleus.
Type: protein-coding
RefSeq Status: PREDICTED
Previously known as: hypothetical protein LOC329509; uncharacterized protein LOC329509
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392127,028,204 - 127,050,200 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2127,028,275 - 127,050,200 (-)EnsemblGRCm39 Ensembl
GRCm382127,186,284 - 127,208,280 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2127,186,355 - 127,208,280 (-)EnsemblGRCm38mm10GRCm38
MGSCv372127,012,091 - 127,034,016 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362126,877,796 - 126,899,721 (-)NCBIMGSCv36mm8
Celera2128,423,595 - 128,447,504 (-)NCBICelera
Cytogenetic Map2F1NCBI
cM Map261.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
cytosol  (IBA)
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18799693   PMID:21267068  
PMID:21677750   PMID:21873635  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:184
Count of miRNA genes:169
Interacting mature miRNAs:177
Transcripts:ENSMUST00000056146, ENSMUST00000150956
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
13506763Tbvq1_mtrabecular bone volume QTL 1 (mouse)2126041920135441920Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112212746146213005Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115212857149212994Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
12904935Edlmmq2_mextensor digitorum longus muscle mass QTL 2 (mouse)297210364131210364Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2100942930134943090Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2100942930134943090Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111173704145173821Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2123937311157937424Mouse
1300798Actre3_mactivity response to ethanol 3 (mouse)Not determined2112024987128173821Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
1301415Actre4_mactivity response to ethanol 4 (mouse)Not determined2112024987128173821Mouse
1301029T2dm3_mtype 2 diabetes mellitus 3 (mouse)Not determined2114288075132714157Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2122883015156883131Mouse
12904954Gmmq2_mgastrocnemius muscle mass QTL 2 (mouse)297210364131210364Mouse
11038696Ltpr2f_mLeishmania tropica response 2f (mouse)2115212857149212994Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2100942930134943090Mouse
1301201Chab1_mcholesterol absorption 1 (mouse)Not determined2111551028145551163Mouse
11038699Ltpr2b_mLeishmania tropica response 2b (mouse)2112212746146213005Mouse
11038700Ltpr2a_mLeishmania tropica response 2a (mouse)2112212746146213005Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
11049568Lmr28c_mleishmaniasis resistance 28c (mouse)297123370131123532Mouse
11049569Lmr28d_mleishmaniasis resistance 28d (mouse)297123370131123532Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110489658144489807Mouse
1301825Pbrgcsf1_mperipheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)Not determined2106233580140233729Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100824060134824269Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111173704145173821Mouse
1301066Otx2m2_morthodenticle homolog 2 (Drosophila) modifier 2 (mouse)Not determined2123231973148700377Mouse
11041906Lmr28a_mleishmaniasis resistance 28a (mouse)2103095716129213005Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111173704145173821Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
10043875Bw25_mbody weight QTL 25 (mouse)Not determined2107255676141255676Mouse
1300712El2_mepilepsy 2 (mouse)Not determined2122207146142532135Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000056146   ⟹   ENSMUSP00000061355
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2127,028,275 - 127,050,200 (-)Ensembl
GRCm38.p6 Ensembl2127,186,355 - 127,208,280 (-)Ensembl
Ensembl Acc Id: ENSMUST00000150956
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2127,044,487 - 127,050,174 (-)Ensembl
GRCm38.p6 Ensembl2127,202,567 - 127,208,254 (-)Ensembl
RefSeq Acc Id: NM_198630   ⟹   NP_941032
RefSeq Status: PREDICTED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392127,028,275 - 127,050,200 (-)NCBI
GRCm382127,186,355 - 127,208,280 (-)NCBI
MGSCv372127,012,091 - 127,034,016 (-)RGD
Celera2128,423,595 - 128,447,504 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006499777   ⟹   XP_006499840
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392127,028,204 - 127,031,099 (-)NCBI
GRCm382127,186,284 - 127,189,179 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006499778   ⟹   XP_006499841
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392127,028,204 - 127,031,099 (-)NCBI
GRCm382127,186,284 - 127,189,179 (-)NCBI
Sequence:
RefSeq Acc Id: NP_941032   ⟸   NM_198630
- UniProtKB: Q8BWE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006499841   ⟸   XM_006499778
- Peptide Label: isoform X1
- UniProtKB: Q8BWE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006499840   ⟸   XM_006499777
- Peptide Label: isoform X1
- UniProtKB: Q8BWE1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000061355   ⟸   ENSMUST00000056146
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BWE1-F1-model_v2 AlphaFold Q8BWE1 1-200 view protein structure

Promoters
RGD ID:6832859
Promoter ID:MM_KWN:31582
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000052695,   LINCRNA_609,   NM_198630,   OTTMUST00000038150,   OTTMUST00000038159,   OTTMUST00000038160
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362127,033,771 - 127,034,271 (+)MPROMDB
RGD ID:6878630
Promoter ID:EPDNEW_M2766
Type:multiple initiation site
Name:1810024B03Rik_2
Description:Mus musculus RIKEN cDNA 1810024B03 gene , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2767  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382127,188,790 - 127,188,850EPDNEW
RGD ID:6878632
Promoter ID:EPDNEW_M2767
Type:multiple initiation site
Name:1810024B03Rik_1
Description:Mus musculus RIKEN cDNA 1810024B03 gene , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2766  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382127,208,262 - 127,208,322EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1925560 AgrOrtholog
Ensembl Genes ENSMUSG00000044145 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000056146 ENTREZGENE
  ENSMUST00000056146.2 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
KEGG Report mmu:329509 UniProtKB/TrEMBL
MGD MGI:1925560 ENTREZGENE
NCBI Gene 1810024B03Rik ENTREZGENE
PANTHER GENE 10662-RELATED UniProtKB/TrEMBL
  MAP/MICROTUBULE AFFINITY-REGULATING KINASE UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PhenoGen 1810024B03Rik PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
UniProt Q8BWE1 ENTREZGENE, UniProtKB/TrEMBL