BB218582 (expressed sequence BB218582)

Advanced Search (OLGA)

Gene: BB218582 (expressed sequence BB218582) Mus musculus

Analyze

Symbol:

BB218582

Name:

expressed sequence BB218582

RGD ID:

1610579

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC99465; uncharacterized protein LOC99465

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	106,473,262 - 106,480,709 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	106,453,746 - 106,481,049 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	106,642,917 - 106,650,364 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	106,642,914 - 106,650,364 (-)	Ensembl	GRCm38		mm10	GRCm38
Celera	2	107,862,365 - 107,870,176 (-)	NCBI		Celera
Cytogenetic Map	2	E3	NCBI
cM Map	2	55.78	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cellular_component (ND)

Molecular Function

molecular_function (ND)

References

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:15747579	PMID:16141072	PMID:16141073	PMID:24200680	PMID:27899360

Genomics

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	190
Count of miRNA genes:	116
Interacting mature miRNAs:	117
Transcripts:	ENSMUST00000123623, ENSMUST00000135180, ENSMUST00000139514
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301330	Tbbmd2_m	total body bone mineral density 2 (mouse)			Not determined		2	100942930	134943090	Mouse
11038697	Ltpr2d_m	Leishmania tropica response 2d (mouse)					2	86095716	120095823	Mouse
11038698	Ltpr2c_m	Leishmania tropica response 2c (mouse)					2	86095716	120095823	Mouse
39128209	Lwq14_m	liver weight QTL 14 (mouse)					2	20897778	118894840	Mouse
1558738	W6q1_m	weight 6 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
13824983	Vclq1_m	curvilinear velocity QTL 1 (mouse)					2	61830344	136841920	Mouse
1301909	Smdq2_m	segregation of mitochondrial DNA QTL 2 (mouse)			Not determined		2	92778465	126778607	Mouse
11038702	Ltpr2_m	Leishmania tropica response 2 (mouse)					2	103095716	167212356	Mouse
11049568	Lmr28c_m	leishmaniasis resistance 28c (mouse)					2	97123370	131123532	Mouse
11049569	Lmr28d_m	leishmaniasis resistance 28d (mouse)					2	97123370	131123532	Mouse
11528549	Sluc31_m	susceptibility to lung cancer 31 (mouse)					2	74524117	129213005	Mouse
1302174	Dssc2_m	dextran sodium sulfate induced colitis QTL2 (mouse)			Not determined		2	24224632	148700377	Mouse
1301825	Pbrgcsf1_m	peripheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)			Not determined		2	106233580	140233729	Mouse
1558915	W3q1_m	weight 3 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
11532731	Sluc31a_m	susceptibility to lung cancer 31a (mouse)					2	88015003	122015170	Mouse
4141802	Ignpq1_m	IgA nephropathy QTL 1 (mouse)			Not determined		2	100824060	134824269	Mouse
27226761	Feml18_m	femur length 18, 16 week (mouse)					2	94230345	154241920	Mouse
1301834	Bits1_m	bitterness sensitivity 1 (mouse)			Not determined		2	87440643	121440778	Mouse
1357454	Kidq1_m	kidney weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
11041906	Lmr28a_m	leishmaniasis resistance 28a (mouse)					2	103095716	129213005	Mouse
4141155	Plast2b_m	plasma plant sterol 2b (mouse)			Not determined		2	84013198	148522175	Mouse
1357577	Trmq3_m	T cell ratio modifier QTL 3 (mouse)			Not determined		2	60520612	119355518	Mouse
1558966	W10q9_m	weight 10 weeks QTL 9 (mouse)			Not determined		2	20897778	118894840	Mouse
4141854	T2dm2sa_m	type 2 diabetes mellitus 2 in SMXA RI mice (mouse)			Not determined		2	29307947	148374934	Mouse
1558901	Skmw8_m	skeletal muscle weight 8 (mouse)			Not determined		2	84008488	118008593	Mouse
12904935	Edlmmq2_m	extensor digitorum longus muscle mass QTL 2 (mouse)					2	97210364	131210364	Mouse
1302071	Fembrs1_m	femur breaking strength 1 (mouse)			Not determined		2	100942930	134943090	Mouse
1558899	Egq1_m	early growth QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1357681	Hrtq1_m	heart weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1301109	Dntcs2_m	dental caries susceptibility 2 (mouse)			Not determined		2	40885493	114910165	Mouse
1300852	Lmr14_m	leishmaniasis resistance 14 (mouse)			Not determined		2	86095716	120095823	Mouse
1302203	Gvhd3_m	graft-versus host disease 3 (mouse)			Not determined		2	100942930	134943090	Mouse
1357436	Splq1_m	spleen weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
10412082	Hylaq1_m	Hyperlocomotor activity related QTL 1 (mouse)			Not determined		2	84013198	148667470	Mouse
1357881	Estoq1_m	embryo survival total QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1301374	Cplaq7_m	circadian period of locomotor activity 7 (mouse)			Not determined		2	76421483	110421651	Mouse
5491197	Mobq5_m	multigenic obesity QTL 5 (mouse)			Not determined		2	65269746	162518926	Mouse
5491196	Mobq6_m	multigenic obesity QTL 6 (mouse)			Not determined		2	85724269	180896594	Mouse
10043894	Bw22_m	body weight QTL 22 (mouse)			Not determined		2	80895334	114895334	Mouse
4142223	Femwf4_m	femur work to failure 4 (mouse)			Not determined			88143423	122143570	Mouse
15092054	Egrme5_m	early growth rate, maternal effect 5 (mouse)					2	82190187	118004745	Mouse
1301344	Lith1_m	lithogenic gene 1 (mouse)			Not determined		2	45347635	145312647	Mouse
11049565	Lmr28g_m	leishmaniasis resistance 28g (mouse)					2	86095716	120095823	Mouse
4141448	Mpaps1_m	microphthalmia anophthalmia susceptibility 1 (mouse)			Not determined			97028557	112115196	Mouse
4142088	Parms1_m	patched associated RMS 1 (mouse)			Not determined			74524117	114123532	Mouse
1301098	Cd8mts3_m	CD8 memory T cell subset 3 (mouse)			Not determined		2	91089974	125090104	Mouse
27226788	Feml13_m	femur length 13, 10 week (mouse)					2	102630345	159941920	Mouse
12904954	Gmmq2_m	gastrocnemius muscle mass QTL 2 (mouse)					2	97210364	131210364	Mouse

Markers in Region

BB218582

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	2	106,642,992 - 106,643,105	UniSTS	GRCm38
MGSCv37	2	106,483,149 - 106,483,262	UniSTS	GRCm37
Celera	2	107,862,444 - 107,862,557	UniSTS
Whitehead/MRC_RH	2	1420.24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NR_137201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK039739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK084494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL773514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB218582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BP765765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY467885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000123623

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,728 (-)	Ensembl
GRCm38.p6 Ensembl	2	106,642,917 - 106,650,364 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000135180

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,259 - 106,480,709 (-)	Ensembl
GRCm38.p6 Ensembl	2	106,642,914 - 106,643,388 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000139514

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,477,498 - 106,480,734 (-)	Ensembl
GRCm38.p6 Ensembl	2	106,647,210 - 106,650,334 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000241042

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,714 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000243209

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,257 - 106,481,049 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000243277

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,252 - 106,481,035 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000243556

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,257 - 106,481,042 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000243653

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,256 - 106,480,752 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000243840

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,257 - 106,480,703 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000245166

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,252 - 106,480,878 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000246158

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,252 - 106,480,752 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000246375

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,677 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000246882

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,252 - 106,480,733 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000246930

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,733 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000247261

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,860 - 106,480,714 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329969

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,453,746 - 106,480,674 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329970

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,248 - 106,481,035 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329972

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,251 - 106,480,872 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329973

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,872 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329974

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,872 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329975

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,872 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329976

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,254 - 106,480,863 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329977

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,863 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329978

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,849 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329979

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,820 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329980

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,791 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329981

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,758 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329982

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,248 - 106,480,745 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329983

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,752 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329984

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,745 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329985

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,260 - 106,480,745 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329986

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,739 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329987

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,732 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329988

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,732 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329989

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,259 - 106,480,730 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329990

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,732 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329991

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,719 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329992

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,260 - 106,480,719 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329993

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,714 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329994

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,257 - 106,480,711 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329995

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,260 - 106,480,714 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329996

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,714 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329997

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,709 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329998

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,709 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000329999

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,709 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330000

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,709 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330001

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,259 - 106,480,709 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330002

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,261 - 106,480,711 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330003

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,709 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330004

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,703 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330005

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,703 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330006

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,260 - 106,480,703 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330007

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,702 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330008

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,259 - 106,480,686 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330009

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,681 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330010

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,259 - 106,480,679 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330011

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,258 - 106,480,677 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330012

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,260 - 106,480,679 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330013

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,680 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330014

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,680 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330015

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,680 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330016

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,260 - 106,480,677 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330017

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,679 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330018

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,261 - 106,480,674 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330019

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,674 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330020

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,480,667 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330021

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,682 - 106,480,724 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330022

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,947 - 106,480,745 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330023

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,938 - 106,480,706 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330024

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,947 - 106,480,706 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330025

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,474,079 - 106,480,714 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330026

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,260 - 106,480,752 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330027

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,260 - 106,480,745 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330028

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,260 - 106,480,732 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330029

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,265 - 106,480,733 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330030

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,265 - 106,480,711 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330031

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,260 - 106,480,686 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330032

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,260 - 106,480,680 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330033

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,263 - 106,480,680 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330034

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,860 - 106,480,714 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330035

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,860 - 106,480,714 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330036

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,475,862 - 106,480,685 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330037

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,477,450 - 106,480,818 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330038

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,477,531 - 106,480,794 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330039

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,474,459 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330040

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,473,262 - 106,474,370 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000330041

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	106,480,116 - 106,480,681 (-)	Ensembl

RefSeq Acc Id:

NR_137201

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	106,473,262 - 106,480,709 (-)	NCBI
GRCm38	2	106,642,917 - 106,650,364 (-)	NCBI

Sequence:

show sequence

GTTATTACTGTCTGATTTGATCGGAGGCAGGGGGTGGTCTCCAATCAAACAGAGAAAAGGTCCT
GGAGAAGATGTATCTTTAAAGCTGTCCTGCTGAATTGGAAGTCCCTGGAGGGCAGAACTGGCAC
CCTGTTCAATCTGGAATGCCCAGAAATTCAATCAACAGAAGTCAGTATTGATTTCACACCCTCC
TGGACCCCTATTTGAGTCTCTGTGTGGTGGCCCCTCTCCCCGGAAGTGAAGTCTTCCAGACTAT
GAACTTCTGGTGAGATTCCTAACACTACCAACCTCAGGAGTACAGAGCCCAGAGAAAGTCCATT
GGGGTCCATTTTCAGGATGGTGCATATGGGAACAATAATTTATGAACGACAAAGTCTCTCACCA
TACAGAGTGCAGCATTTCGACCATAGTGGTTGGGCAGCCAGCCCTTGGGATTCTCCTGTCCCAG
TCTTCCCAGATGTGGGGTTATTCATTTGAGTATTCGAACCCAGCTCAGTTTCTTGTCCATCATG
AGCCATCTTTTCCCAATTGAGTACTCGAAAGAAGAAAACTGGGCTAGAGAAACAGGATCTCGGA
TGATTATAATTGAAGAGTGTCTATTGCTCCAGAGCCACAATCTATGAGCTAGAAGACAGCTGGG
ACAGCAAATTCTTGACTCGCTTATCATCATGTTCCCTTTCCATGGTCAGCCCAGACTCTGGGCT
CCATCACAACACACTAGTCTGTTCAGCATGGAGTACCTTTTTTGCCTCTTCTAGTCCAGCCATC
CAGGCAAATCAATCAATACACTAAGTGGCAATTCATAAGTGACCCATCGTGTCAAGCTGGAGAG
CAGGAGGGACACCCAGCTTTTTAAAGCGAGCTTATCAATCACTGTATCCCGAATAAGCATCTTC
ATCCCAGCTACAGAAAATAGAAGGCTGTAGAAAAGAACAGGAGGCTAGCCATGCTTTCAACCTT
ATTTTAAAGTAATTATATGAAAAAAGTCTGTGTTTATAAACTAATAAATTATACACTTTTAAAA
AAAAAAAAAAAAAA

hide sequence

Promoters

RGD ID:

6878152

Promoter ID:

EPDNEW_M2527

Type:

initiation region

Name:

BB218582_1

Description:

Mus musculus expressed sequence BB218582 , long non-coding RNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	2	106,650,369 - 106,650,429	EPDNEW

RGD ID:

15092386

Promoter ID:

EPDNEWNC_M298

Type:

initiation region

Name:

BB218582_1

Description:

expressed sequence BB218582 [Source:MGISymbol;Acc:MGI:2139448]

SO ACC ID:

SO:0000170

Source:

EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	2	106,650,369 - 106,650,429	EPDNEWNC

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000085218	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000123623	ENTREZGENE
MGD	MGI:2139448	ENTREZGENE
NCBI Gene	BB218582	ENTREZGENE
PhenoGen	BB218582	PhenoGen
RNAcentral	URS0000A770CC	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message