Gm26697 (predicted gene, 26697) - Rat Genome Database

Name: Gm26697
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Gm26697 (predicted gene, 26697) Mus musculus

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Symbol:

Gm26697

Name:

predicted gene, 26697

RGD ID:

9628667

MGI Page

MGI

Description:

Type:

ncrna

RefSeq Status:

MODEL

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	126,363,121 - 126,387,861 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm38	2	126,521,201 - 126,545,941 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
Celera	2	127,759,148 - 127,783,515 (-)	NCBI		Celera
Cytogenetic Map	2	F1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

Additional References at PubMed

PMID:18799693

Genomics

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1302033	Nsv1_m	Neuroadapted Sindbis viral RNA level 1 (mouse)			Not determined		2	111623386	145623526	Mouse
1301905	Lgth2_m	body length 2 (mouse)			Not determined		2	111173704	145173821	Mouse
13506763	Tbvq1_m	trabecular bone volume QTL 1 (mouse)					2	126041920	135441920	Mouse
13824983	Vclq1_m	curvilinear velocity QTL 1 (mouse)					2	61830344	136841920	Mouse
1301909	Smdq2_m	segregation of mitochondrial DNA QTL 2 (mouse)			Not determined		2	92778465	126778607	Mouse
11039520	Ltpr2h_m	Leishmania tropica response 2h (mouse)					2	112212746	146213005	Mouse
11039521	Ltpr2g_m	Leishmania tropica response 2g (mouse)					2	115212857	149212994	Mouse
12910799	Pwgrq2_m	pre-weaning growth rate QTL 2 (mouse)					2	118589253	160611165	Mouse
1302174	Dssc2_m	dextran sodium sulfate induced colitis QTL2 (mouse)			Not determined		2	24224632	148700377	Mouse
12910795	Pwbwq5_m	post-weaning body weight QTL 5 (mouse)					2	118589253	160611165	Mouse
27226761	Feml18_m	femur length 18, 16 week (mouse)					2	94230345	154241920	Mouse
12910812	Pwgrq1_m	pre-weaning growth rate QTL 1 (mouse)					2	118589253	160611165	Mouse
12910814	Pwbwq1_m	pre-weaning body weight QTL 1 (mouse)					2	118589253	160611165	Mouse
4141854	T2dm2sa_m	type 2 diabetes mellitus 2 in SMXA RI mice (mouse)			Not determined		2	29307947	148374934	Mouse
12904935	Edlmmq2_m	extensor digitorum longus muscle mass QTL 2 (mouse)					2	97210364	131210364	Mouse
1302071	Fembrs1_m	femur breaking strength 1 (mouse)			Not determined		2	100942930	134943090	Mouse
10045885	Cplaq15_m	circadian period of locomotor activity 15 (mouse)			Not determined		2	110916118	154354667	Mouse
1302203	Gvhd3_m	graft-versus host disease 3 (mouse)			Not determined		2	100942930	134943090	Mouse
1300793	Pcfm2_m	periosteal circumference and femur length 2 (mouse)			Not determined		2	111173704	145173821	Mouse
10412082	Hylaq1_m	Hyperlocomotor activity related QTL 1 (mouse)			Not determined		2	84013198	148667470	Mouse
1301822	Pgia2_m	proteoglycan induced arthritis 2 (mouse)			Not determined		2	123937311	157937424	Mouse
1300798	Actre3_m	activity response to ethanol 3 (mouse)			Not determined		2	112024987	128173821	Mouse
5491197	Mobq5_m	multigenic obesity QTL 5 (mouse)			Not determined		2	65269746	162518926	Mouse
5491196	Mobq6_m	multigenic obesity QTL 6 (mouse)			Not determined		2	85724269	180896594	Mouse
1301415	Actre4_m	activity response to ethanol 4 (mouse)			Not determined		2	112024987	128173821	Mouse
1301029	T2dm3_m	type 2 diabetes mellitus 3 (mouse)			Not determined		2	114288075	132714157	Mouse
27226788	Feml13_m	femur length 13, 10 week (mouse)					2	102630345	159941920	Mouse
1301295	Prdt1_m	prion disease incubation time 1 (mouse)			Not determined		2	116077623	150077741	Mouse
1301294	Hrtfm5_m	heart failure modifier 5 (mouse)			Not determined		2	122883015	156883131	Mouse
12904954	Gmmq2_m	gastrocnemius muscle mass QTL 2 (mouse)					2	97210364	131210364	Mouse
11038696	Ltpr2f_m	Leishmania tropica response 2f (mouse)					2	115212857	149212994	Mouse
1301330	Tbbmd2_m	total body bone mineral density 2 (mouse)			Not determined		2	100942930	134943090	Mouse
1301201	Chab1_m	cholesterol absorption 1 (mouse)			Not determined		2	111551028	145551163	Mouse
11038699	Ltpr2b_m	Leishmania tropica response 2b (mouse)					2	112212746	146213005	Mouse
11038700	Ltpr2a_m	Leishmania tropica response 2a (mouse)					2	112212746	146213005	Mouse
11038702	Ltpr2_m	Leishmania tropica response 2 (mouse)					2	103095716	167212356	Mouse
11049568	Lmr28c_m	leishmaniasis resistance 28c (mouse)					2	97123370	131123532	Mouse
11049569	Lmr28d_m	leishmaniasis resistance 28d (mouse)					2	97123370	131123532	Mouse
11528549	Sluc31_m	susceptibility to lung cancer 31 (mouse)					2	74524117	129213005	Mouse
1301087	Bbaa15_m	B.burgdorferi-associated arthritis 15 (mouse)			Not determined		2	110489658	144489807	Mouse
1301825	Pbrgcsf1_m	peripheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)			Not determined		2	106233580	140233729	Mouse
4141802	Ignpq1_m	IgA nephropathy QTL 1 (mouse)			Not determined		2	100824060	134824269	Mouse
1558990	Skmw9_m	skeletal muscle weight 9 (mouse)			Not determined		2	111173704	145173821	Mouse
1301066	Otx2m2_m	orthodenticle homolog 2 (Drosophila) modifier 2 (mouse)			Not determined		2	123231973	148700377	Mouse
11041906	Lmr28a_m	leishmaniasis resistance 28a (mouse)					2	103095716	129213005	Mouse
4141155	Plast2b_m	plasma plant sterol 2b (mouse)			Not determined		2	84013198	148522175	Mouse
1301618	Bglu1_m	blood glucose level 1 (mouse)			Not determined		2	117942930	174324863	Mouse
27226749	Femd10_m	femur midshaft diameter 10, 16 week (mouse)					2	124441920	168241920	Mouse
1301755	Hrq1_m	heart rate quantitative locus 1 (mouse)			Not determined		2	111173704	145173821	Mouse
1301344	Lith1_m	lithogenic gene 1 (mouse)			Not determined		2	45347635	145312647	Mouse
1558881	Ses7_m	salmonella enteritidis susceptibility 7 (mouse)			Not determined		2	116306330	150306474	Mouse
10043875	Bw25_m	body weight QTL 25 (mouse)			Not determined		2	107255676	141255676	Mouse
1300712	El2_m	epilepsy 2 (mouse)			Not determined		2	122207146	142532135	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XR_003954058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_866699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_866700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AL831764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XR_003954058

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	126,371,786 - 126,387,861 (-)	NCBI
GRCm38	2	126,529,866 - 126,545,941 (-)	NCBI

Sequence:

show sequence

AAACAAAAACCCCAAAGCAAAAACAAACAAACAAACAAACAAGAGTCAAACCGAGCCACCCTTA
AATAACCCCAACCAAGGGCAGGAAAGGTGTTTTTACAAGAACTTCAAGACATTGAAGAAAGAAA
TTACAGTGAACAGTGGATGGTGGAAAGATTTCCTATGCTTGTAGACTGGAAGAATTAGTATCAT
AGCTTACCAAAAGCAATCTTCAAATTCCATGTAGTGCCTATCAAAAGTCCAGTGACATTCTTCA
CATTATTGAATAAATAATCTTTTTCGAGAAAGTCATCTTAAAAATGGTCCTACGTTAATTTTAG
GTAAACATAATACAATAAGGCTCCTTGGGGCTTTATTAACCTGGGTGTTCTTTGCCCTTCTTCT
TTGGTGACCTCTGTCCCCATTCCCTAGTTGAAATTCCTCCCCCGCTTTTTTTTCTGTTTACCCT
TCACATCACCTGAACTCTGACATTCGCACCCCACTGCTCGCTGCAATCCCTTTATACTTTCCTG
GTTCCTGTGGTTCTCCATATTGTAGTCACATCTGAGGACCTAGAGCTAGTGGCTGCCAGCAAGA
AGTCATGCTACTTGGGCTGGTAATCCTTCCCACAAGAACCACAGACTAACAGAAATCCCAGAAC
CAGGCATGAGAAACCTCCCTCAAATAGTTGGTCAGAGTAGCCCAAGTGACTCTCCAAACAGTGC
AGACCATTGCTATTGCCCCTGCGGCCTCTCCAAAGTTGAAGGTAAATGTAGCTACCACGTCTAT
CAAAGAAGCTTCTCTTTACAGCGAATGGAAAGCACAACTGGACATAAGGCAGAGATCAGTGGTT
GGTGGGGGCCAAACGGCTACATCCGCAGCACGGCACCTGCATCTTTGACTCAGGGGACATAGCA
GAGGAGATCTGAAAGATTGAAAGAGCTGGAACATCAGGGAGTCTGCTGAAAGACTATCTTTTCA
GAATGCTGAAAATAAAACTCCTATGTGACTCAGCTGTTCTGCCCCCATGAACATACCCAAGGAA
CTCCACATCCTACAGAGATATTTATTTACGGTTACTACTGCACTATTCACAAACCACAAGGAAA
TGGAAGCAGCTTAGATGCCCATACACAGTGAAAACGTAGTCCATATCCACAATGGGATTTTATT
CAGCTATAAAGCCAATTCCTTCTCCAAGGGACCCTGTACTGCTGCTTCTACAGACTCTAGACAC
CTGGGTTGGTGACCTTAGCTGCTCGTTGTACCCCCTAACCAAGGAAGGGGAAGTGTTTGTGTGG
ACCCCAGATCACCAAAAAGCCTTAAAAAAAAAGGCCCTACTAACGGCCAGCCTTTGCCTAACCT
AACCAAGCCTTTCACTCTTTATGTGGAAAAGAGATCAAGAAAAGCCAGAGGAGTCCTTACTCAG
ACTTTGGGACTTTAAAAAAGGCCAGTGGCTTACCTATCCAAGAAGTTACACCCTGTTGTCAGTG
GGTGGTTTTCTTGCCTGAAAGCTATTGCTGCCATAACACTGCTTGTCAAGGATGCTGATAAGCT
CACTCTGGGACAGCAAAGAACTGTAGTGGCACCTCACACTCTTAAAAGCATTATCTGAAAGCCC
CCTGACTGATGGATGACGACCAACGCTCCTGTGACACATCAGAACTTTTTGTTGACTGAACGAG
TGACCTTCGCTTCATTCCACCTGCTGTCCCACTGTGTGAGACCGCACCTACTCATCACTGCGCT
GACATTCTGGCAGAAGAAATGATCTGAAGGATCAGATCAGCCTTAGCCTGAGGGCAGTAGCCTC
ACGGTTAAAGGTAAGCAGAAGGCAGGGACAGCAGTATGGTGGTGAACAGAAAGCAAGTGATCTA
GGCCAGCAGCCTCCCTAAAGAGACGTTGGCCCAGAAAGCTGAACTTGTGACTTTAAGACAAGCT
CTATAAATGGCAAAAGAAAAGTCTACACTGACAGCAGATATGCTTTTGCCACTGTATAGAGCAA
TATACAGACAAAGAGGGCTGTTGACCTCTGCAGAGAAAGACCTAAGATGCTGTGGCTAAAAAAA
AAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XR_866699

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	126,371,786 - 126,387,861 (-)	NCBI
GRCm38	2	126,529,866 - 126,545,941 (-)	NCBI

Sequence:

show sequence

AAACAAAAACCCCAAAGCAAAAACAAACAAACAAACAAACAAGAGTCAAACCGAGCCACCCTTA
AATAACCCCAACCAAGGGCAGGAAAGGTGTTTTTACAAGAACTTCAAGACATTGAAGAAAGAAA
TTACAGTGAACAGTGGATGGTGGAAAGATTTCCTATGCTTGTAGACTGGAAGAATTAGTATCAT
AGCTTACCAAAAGCAATCTTCAAATTCCATGTAGTGCCTATCAAAAGTCCAGTGACATTCTTCA
CATTATTGAATAAATAATCTTTTTCGAGAAAGTCATCTTAAAAATGGTCCTACGTTAATTTTAG
GTAAACATAATACAATAAGGCTCCTTGGGGCTTTATTAACCTGGGTGTTCTTTGCCCTTCTTCT
TTGGTGACCTCTGTCCCCATTCCCTAGTTGAAATTCCTCCCCCGCTTTTTTTTCTGTTTACCCT
TCACATCACCTGAACTCTGACATTCGCACCCCACTGCTCGCTGCAATCCCTTTATACTTTCCTG
GTTCCTGTGGTTCTCCATATTGTAGTCACATCTGAGGACCTAGAGCTAGTGGCTGCCAGCAAGT
AAATGTAGCTACCACGTCTATCAAAGAAGCTTCTCTTTACAGCGAATGGAAAGCACAACTGGAC
ATAAGGCAGAGATCAGTGGTTGGTGGGGGCCAAACGGCTACATCCGCAGCACGGCACCTGCATC
TTTGACTCAGGGGACATAGCAGAGGAGATCTGAAAGATTGAAAGAGCTGGAACATCAGGGAGTC
TGCTGAAAGACTATCTTTTCAGAATGCTGAAAATAAAACTCCTATGTGACTCAGCTGTTCTGCC
CCCATGAACATACCCAAGGAACTCCACATCCTACAGAGATATTTATTTACGGTTACTACTGCAC
TATTCACAAACCACAAGGAAATGGAAGCAGCTTAGATGCCCATACACAGTGAAAACGTAGTCCA
TATCCACAATGGGATTTTATTCAGCTATAAAGCCAATTCCTTCTCCAAGGGACCCTGTACTGCT
GCTTCTACAGACTCTAGACACCTGGGTTGGTGACCTTAGCTGCTCGTTGTACCCCCTAACCAAG
GAAGGGGAAGTGTTTGTGTGGACCCCAGATCACCAAAAAGCCTTAAAAAAAAAGGCCCTACTAA
CGGCCAGCCTTTGCCTAACCTAACCAAGCCTTTCACTCTTTATGTGGAAAAGAGATCAAGAAAA
GCCAGAGGAGTCCTTACTCAGACTTTGGGACTTTAAAAAAGGCCAGTGGCTTACCTATCCAAGA
AGTTACACCCTGTTGTCAGTGGGTGGTTTTCTTGCCTGAAAGCTATTGCTGCCATAACACTGCT
TGTCAAGGATGCTGATAAGCTCACTCTGGGACAGCAAAGAACTGTAGTGGCACCTCACACTCTT
AAAAGCATTATCTGAAAGCCCCCTGACTGATGGATGACGACCAACGCTCCTGTGACACATCAGA
ACTTTTTGTTGACTGAACGAGTGACCTTCGCTTCATTCCACCTGCTGTCCCACTGTGTGAGACC
GCACCTACTCATCACTGCGCTGACATTCTGGCAGAAGAAATGATCTGAAGGATCAGATCAGCCT
TAGCCTGAGGGCAGTAGCCTCACGGTTAAAGGTAAGCAGAAGGCAGGGACAGCAGTATGGTGGT
GAACAGAAAGCAAGTGATCTAGGCCAGCAGCCTCCCTAAAGAGACGTTGGCCCAGAAAGCTGAA
CTTGTGACTTTAAGACAAGCTCTATAAATGGCAAAAGAAAAGTCTACACTGACAGCAGATATGC
TTTTGCCACTGTATAGAGCAATATACAGACAAAGAGGGCTGTTGACCTCTGCAGAGAAAGACCT
AAGATGCTGTGGCTAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XR_866700

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	126,363,121 - 126,387,861 (-)	NCBI
GRCm38	2	126,521,201 - 126,545,941 (-)	NCBI

Sequence:

show sequence

AAACAAAAACCCCAAAGCAAAAACAAACAAACAAACAAACAAGAGTCAAACCGAGCCACCCTTA
AATAACCCCAACCAAGGGCAGGAAAGGTGTTTTTACAAGAACTTCAAGACATTGAAGAAAGAAA
TTACAGTGAACAGTGGATGGTGGAAAGATTTCCTATGCTTGTAGACTGGAAGAATTAGTATCAT
AGCTTACCAAAAGCAATCTTCAAATTCCATGTAGTGCCTATCAAAAGTCCAGTGACATTCTTCA
CATTATTGAATAAATAATCTTTTTCGAGAAAGTCATCTTAAAAATGGTCCTACGTTAATTTTAG
GTAAACATAATACAATAAGGCTCCTTGGGGCTTTATTAACCTGGGTGTTCTTTGCCCTTCTTCT
TTGGTGACCTCTGTCCCCATTCCCTAGTTGAAATTCCTCCCCCGCTTTTTTTTCTGTTTACCCT
TCACATCACCTGAACTCTGACATTCGCACCCCACTGCTCGCTGCAATCCCTTTATACTTTCCTG
GTTCCTGTGGTTCTCCATATTGTAGTCACATCTGAGGACCTAGAGCTAGTGGCTGCCAGCAAGT
AAATGTAGCTACCACGTCTATCAAAGAAGCTTCTCTTTACAGCGAATGGAAAGCACAACTGGAC
ATAAGGCAGAGATCAGTGGTTGGTGGGGGCCAAACGGCTACATCCGCAGCACGGCACCTGCATC
TTTGACTCAGGGGACATAGCAGAGGAGATCTGAAAGATTGAAAGAGCTGGAACATCAGGGAGTC
TGCTGAAAGACTATCTTTTCAGAATGCTGAAAATAAAACTCCTATGTGACTCAGCTGTTCTGCC
CCCATGAACATACCCAAGGAACTCCACATCCTACAGAGATATTTATTTACGGTTACTACTGCAC
TATTCACAAACCACAAGGAAATGGAAGCAGCTTAGATGCCCATACACAGTGAAAACGTAGTCCA
TATCCACAATGGGATTTTATTCAGCTATAAAGATAAGCGCCTTCCAATCCTATTCAAAGAAGCT
TCTCTTTACACCAATGCGGACCGTTACAGAGCACCACAGCTGGACATAAGAGGGAGACAATGGT
TCCCGGGAACCCGAGTGCCCGTGGGCAGAGCATCATCACAGCTCCTGCATCTCTGGCCCAGGAA
ACACAGAGGAAGAGGTGGTGGGAAGACTACCAGGAAGTCTGCCATGAGACTGTCTCTCATAGAA
ATGGCTGCACAAACAGGACCAGAACAACGGGCAGTATCAGGTGAAATGGTAACGTGGAAGCCGG
TAATCTCATGCCGTTCATTTCCTAGGCAAAGACCCACAGACAATAATTGCTAAGAGAGTGAAAA
TTAGCTTCTCCCTGAGACGATCCCCCGGAGATAGCCACCCCGAAGTCACACCCTCACAATCAAC
ACACACAGCCGCAGCAGACTGTACTTACATATCTGCATGTCTCAATAGTCATCAAAGAAAAAGA
GGCTGTCCATTTGAGAGCAAGGGAGGGGACAGTGAAAGGGTTGGAGGCAGGGGACGCGGGAGGG
GTTGGAGAGAGGTTAGGAAAAGCAGGGAGTGATGCAATTACCCTTTGATTAAAATGGATTAAAC
TTAATATAGTAAAGTAATTCTACCCTCTGCCTGTCAGGGCACACTGTGTACCTTTTCCTGAAAC
TCACCAAACCCATTCGTTTCTGCATAAACGTCTTATATTTCCTCTTTGCAAGAACAATCACTTA
AGCACATTTTATTATTTTTTTCTCATTTTTATTTTGTTGTGCAAAAAAATATTTTCATTCTGAA
TTCCTTTTATTTGTGTTTCTAACAACCAGTTTTGGCTGGATAGGAATGTTTGTTGGTTTTTTGA
TGAGAGAATAAAGTTAAAAATTTCAAAGTA

hide sequence

Additional Information

External Database Links

Database	Acc Id	Source(s)
MGD	MGI:5477191	ENTREZGENE
NCBI Gene	Gm26697	ENTREZGENE
PhenoGen	Gm26697	PhenoGen

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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