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Gene: Immp1l (IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)) Mus musculus

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Symbol:

Immp1l

Name:

IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)

RGD ID:

1622322

MGI Page

MGI

Description:

Predicted to enable serine-type endopeptidase activity. Predicted to be involved in protein processing involved in protein targeting to mitochondrion. Located in mitochondrion. Orthologous to human IMMP1L (inner mitochondrial membrane peptidase subunit 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

1500034J20Rik; 2610528O17Rik; AU042386; IMP1-like protein; MGC101970; mitochondrial inner membrane protease subunit 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Related Pseudogenes:

Gm8121

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	105,735,013 - 105,795,904 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	105,734,983 - 105,795,903 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	105,904,638 - 105,965,558 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	105,904,638 - 105,965,558 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	105,744,795 - 105,805,715 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	105,705,524 - 105,768,025 (+)	NCBI		MGSCv36	mm8
Celera	2	107,127,142 - 107,181,499 (+)	NCBI		Celera
Cytogenetic Map	2	E3	NCBI
cM Map	2	55.43	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

aniridia (ISO)

aniridia 1 (ISO)

Denys-Drash syndrome (ISO)

intellectual disability (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (EXP)

14-Deoxy-11,12-didehydroandrographolide (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

Aroclor 1254 (EXP)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP,ISO)

carbon nanotube (EXP)

clothianidin (ISO)

copper(II) sulfate (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

epoxiconazole (EXP)

folic acid (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methylmercury chloride (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (EXP)

potassium chromate (ISO)

quercetin (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tetrachloromethane (ISO)

thimerosal (ISO)

trichostatin A (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein processing involved in protein targeting to mitochondrion (IBA)

signal peptide processing (IEA)

Cellular Component

mitochondrial inner membrane (IEA)

mitochondrial inner membrane peptidase complex (IBA)

mitochondrion (IDA,ISO)

Molecular Function

serine-type endopeptidase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

presequence pathway of mitochondrial protein import (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Processing of mitochondrial presequences.	Mossmann D, etal., Biochim Biophys Acta. 2012 Sep-Oct;1819(9-10):1098-106. doi: 10.1016/j.bbagrm.2011.11.007. Epub 2011 Dec 7.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10725249	PMID:11042159	PMID:11076861	PMID:11125038	PMID:11217851	PMID:12466851	PMID:12477932	PMID:14610273	PMID:15489334	PMID:15814844
PMID:16141072	PMID:16141073	PMID:16450175	PMID:16919269	PMID:18799693	PMID:19474196	PMID:21677750	PMID:21873635

Genomics

Comparative Map Data

Immp1l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	105,735,013 - 105,795,904 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	105,734,983 - 105,795,903 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	105,904,638 - 105,965,558 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	105,904,638 - 105,965,558 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	105,744,795 - 105,805,715 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	105,705,524 - 105,768,025 (+)	NCBI		MGSCv36	mm8
Celera	2	107,127,142 - 107,181,499 (+)	NCBI		Celera
Cytogenetic Map	2	E3	NCBI
cM Map	2	55.43	NCBI

IMMP1L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	31,432,401 - 31,509,622 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	31,432,401 - 31,509,645 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	31,453,948 - 31,531,169 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	31,410,525 - 31,487,745 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	31,601,371 - 31,678,615 (-)	NCBI		Celera
Cytogenetic Map	11	p13	NCBI
HuRef	11	31,148,356 - 31,225,919 (-)	NCBI		HuRef
CHM1_1	11	31,453,476 - 31,530,721 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	31,568,225 - 31,645,460 (-)	NCBI		T2T-CHM13v2.0

Immp1l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	112,840,015 - 112,904,297 (+)	NCBI		GRCr8
mRatBN7.2	3	92,385,329 - 92,449,559 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	92,385,379 - 92,452,313 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	95,881,218 - 95,945,313 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	104,480,148 - 104,544,243 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	102,308,165 - 102,372,323 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	95,955,126 - 96,024,316 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	95,959,703 - 96,024,836 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	102,575,250 - 102,646,194 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	91,408,864 - 91,436,603 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	91,434,869 - 91,498,889 (+)	NCBI		Celera
Cytogenetic Map	3	q33	NCBI

Immp1l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955476	9,784,838 - 9,850,091 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955476	9,784,838 - 9,850,076 (-)	NCBI	ChiLan1.0	ChiLan1.0

IMMP1L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	33,642,647 - 33,719,978 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	33,647,146 - 33,724,483 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	31,396,011 - 31,473,342 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	31,285,619 - 31,362,866 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	31,285,619 - 31,362,843 (-)	Ensembl	panpan1.1		panPan2

IMMP1L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	35,880,278 - 35,963,128 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	35,880,183 - 35,963,494 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	35,529,405 - 35,612,247 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	36,524,425 - 36,607,191 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	36,524,319 - 36,607,242 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	36,097,808 - 36,180,183 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	35,679,026 - 35,761,612 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	36,314,293 - 36,397,070 (+)	NCBI		UU_Cfam_GSD_1.0

Immp1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	33,091,418 - 33,164,763 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936533	6,216,225 - 6,289,554 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936533	6,216,254 - 6,289,554 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IMMP1L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	29,230,210 - 29,307,210 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	29,230,172 - 29,305,906 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	31,737,387 - 31,813,219 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IMMP1L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	33,679,133 - 33,757,924 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	33,710,582 - 33,756,884 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	130,842,507 - 130,926,241 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Immp1l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	20,285,362 - 20,343,659 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	20,279,082 - 20,343,857 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Immp1l
2157 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	44
Count of miRNA genes:	41
Interacting mature miRNAs:	43
Transcripts:	ENSMUST00000037499
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11038697	Ltpr2d_m	Leishmania tropica response 2d (mouse)					2	86095716	120095823	Mouse
1301330	Tbbmd2_m	total body bone mineral density 2 (mouse)			Not determined		2	100942930	134943090	Mouse
11038698	Ltpr2c_m	Leishmania tropica response 2c (mouse)					2	86095716	120095823	Mouse
39128209	Lwq14_m	liver weight QTL 14 (mouse)					2	20897778	118894840	Mouse
1558738	W6q1_m	weight 6 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
13824983	Vclq1_m	curvilinear velocity QTL 1 (mouse)					2	61830344	136841920	Mouse
1301909	Smdq2_m	segregation of mitochondrial DNA QTL 2 (mouse)			Not determined		2	92778465	126778607	Mouse
11038702	Ltpr2_m	Leishmania tropica response 2 (mouse)					2	103095716	167212356	Mouse
11049568	Lmr28c_m	leishmaniasis resistance 28c (mouse)					2	97123370	131123532	Mouse
11049569	Lmr28d_m	leishmaniasis resistance 28d (mouse)					2	97123370	131123532	Mouse
11528549	Sluc31_m	susceptibility to lung cancer 31 (mouse)					2	74524117	129213005	Mouse
1302174	Dssc2_m	dextran sodium sulfate induced colitis QTL2 (mouse)			Not determined		2	24224632	148700377	Mouse
1558915	W3q1_m	weight 3 weeks QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
11532731	Sluc31a_m	susceptibility to lung cancer 31a (mouse)					2	88015003	122015170	Mouse
4141802	Ignpq1_m	IgA nephropathy QTL 1 (mouse)			Not determined		2	100824060	134824269	Mouse
27226761	Feml18_m	femur length 18, 16 week (mouse)					2	94230345	154241920	Mouse
1301834	Bits1_m	bitterness sensitivity 1 (mouse)			Not determined		2	87440643	121440778	Mouse
1357454	Kidq1_m	kidney weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
11041906	Lmr28a_m	leishmaniasis resistance 28a (mouse)					2	103095716	129213005	Mouse
4141155	Plast2b_m	plasma plant sterol 2b (mouse)			Not determined		2	84013198	148522175	Mouse
1357577	Trmq3_m	T cell ratio modifier QTL 3 (mouse)			Not determined		2	60520612	119355518	Mouse
1558966	W10q9_m	weight 10 weeks QTL 9 (mouse)			Not determined		2	20897778	118894840	Mouse
4141854	T2dm2sa_m	type 2 diabetes mellitus 2 in SMXA RI mice (mouse)			Not determined		2	29307947	148374934	Mouse
1558901	Skmw8_m	skeletal muscle weight 8 (mouse)			Not determined		2	84008488	118008593	Mouse
12904935	Edlmmq2_m	extensor digitorum longus muscle mass QTL 2 (mouse)					2	97210364	131210364	Mouse
1558899	Egq1_m	early growth QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1302071	Fembrs1_m	femur breaking strength 1 (mouse)			Not determined		2	100942930	134943090	Mouse
1357681	Hrtq1_m	heart weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1301109	Dntcs2_m	dental caries susceptibility 2 (mouse)			Not determined		2	40885493	114910165	Mouse
1300852	Lmr14_m	leishmaniasis resistance 14 (mouse)			Not determined		2	86095716	120095823	Mouse
1357436	Splq1_m	spleen weight QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1302203	Gvhd3_m	graft-versus host disease 3 (mouse)			Not determined		2	100942930	134943090	Mouse
10412082	Hylaq1_m	Hyperlocomotor activity related QTL 1 (mouse)			Not determined		2	84013198	148667470	Mouse
1357881	Estoq1_m	embryo survival total QTL 1 (mouse)			Not determined		2	20897778	118894840	Mouse
1301374	Cplaq7_m	circadian period of locomotor activity 7 (mouse)			Not determined		2	76421483	110421651	Mouse
5491197	Mobq5_m	multigenic obesity QTL 5 (mouse)			Not determined		2	65269746	162518926	Mouse
10043894	Bw22_m	body weight QTL 22 (mouse)			Not determined		2	80895334	114895334	Mouse
5491196	Mobq6_m	multigenic obesity QTL 6 (mouse)			Not determined		2	85724269	180896594	Mouse
15092054	Egrme5_m	early growth rate, maternal effect 5 (mouse)					2	82190187	118004745	Mouse
4142223	Femwf4_m	femur work to failure 4 (mouse)			Not determined			88143423	122143570	Mouse
1301344	Lith1_m	lithogenic gene 1 (mouse)			Not determined		2	45347635	145312647	Mouse
11049565	Lmr28g_m	leishmaniasis resistance 28g (mouse)					2	86095716	120095823	Mouse
4142088	Parms1_m	patched associated RMS 1 (mouse)			Not determined			74524117	114123532	Mouse
4141448	Mpaps1_m	microphthalmia anophthalmia susceptibility 1 (mouse)			Not determined			97028557	112115196	Mouse
1301098	Cd8mts3_m	CD8 memory T cell subset 3 (mouse)			Not determined		2	91089974	125090104	Mouse
27226788	Feml13_m	femur length 13, 10 week (mouse)					2	102630345	159941920	Mouse
12904954	Gmmq2_m	gastrocnemius muscle mass QTL 2 (mouse)					2	97210364	131210364	Mouse

Markers in Region

AU042386

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	57,608,773 - 57,608,901	UniSTS	GRCm38
MGSCv37	5	58,000,012 - 58,000,140	UniSTS	GRCm37
Celera	5	54,978,945 - 54,979,073	UniSTS
Cytogenetic Map	5	C1	UniSTS
Cytogenetic Map	2	E3	UniSTS
Whitehead/MRC_RH	5	812.93	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_028260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK005356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK009570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK010075	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK011278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK011382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK011420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK011466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK011618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK011872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK012181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK015978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK078300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK135670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK168202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL590380	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC008259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC081433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000037499 ⟹ ENSMUSP00000049044

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	2	105,734,983 - 105,795,903 (+)	Ensembl
GRCm38.p6 Ensembl	2	105,904,638 - 105,965,558 (+)	Ensembl

RefSeq Acc Id:

NM_028260 ⟹ NP_082536

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	2	105,735,013 - 105,795,904 (+)	NCBI
GRCm38	2	105,904,638 - 105,965,558 (+)	ENTREZGENE
MGSCv37	2	105,744,795 - 105,805,715 (+)	RGD
Celera	2	107,127,142 - 107,181,499 (+)	RGD
cM Map	2		ENTREZGENE

Sequence:

show sequence

GAAAAGTGCGGTGCGTAAAGCTGGAGGGGTGTACGCGGCCCTGGTCCGTCTGAGTCCTGGCCGA
GGAACTTCTGTTGGTGTTTGGGGCCGCAGGAATCGGAAGCCATGGATGACCCATGCACGCTTTG
AGACCTCCGTCAGATCTGGGGTTTCCTGGAAACCTACCATAAAGTTGAACAAATTGTAGAACAG
ACTTATGGCTGGTGGTAGCAGAGTCAACATCAAAGTATGCTTCGTGGTGTTCTGGGAAAGGCTT
TTCGACTTGCTGGCTATACCATTCAGTATGGCTGCATAGCTCATTGTGCTTTTGAATACGTTGG
TGGTGTTGTAATGTGTTCTGGACCATCAATGGAACCCACAATTCAAAATTCAGATATTGTCTTT
GCAGAAAATCTTAGCCGACATTTTTATGGCATCCAAAGAGGTGACATTGTAATTGCAAAAAGCC
CAAGTGATCCAAAATCAAATATCTGTAAAAGAGTAATTGGTTTGGAAGGAGACAAAATCCTCAG
CACTAGTCCATCTGATGTATTTAAGAGCCGCAGTTACGTGCCAACAGGTCATGTTTGGTTAGAA
GGTGATAACTTACAGAATTCTACCGATTCCAGGTATTATGGACCTATACCATATGGACTAATAA
GAGGACGTATCTTCTTTAAGATTTGGCCTTTCAGTGACTTCGGATTTCTGCGTGACAGCCCAAA
TGGCCAGAGATTTTCTGATGATTAATAAGTATTTCTTGATTACTGTCTCCTATTCAAGTGAATT
TATTACTACAGTTGAAACCATGAACTTAATAAACTATTTGCTATTCAGTTTTATTTATGTTTTA
AATATAAGAGTAAATATCACACTCTGCAATATATATTAAGTAAAAGTATTTAGATAAAAATTGA
CCCAAAACAAATTTTCTTTCTAAATTGTATGATATAAAAATATATTGGGGAAGAAATCC

hide sequence

Protein Sequences


Protein RefSeqs	NP_082536	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH08259	(Get FASTA)	NCBI Sequence Viewer
	AAH81433	(Get FASTA)	NCBI Sequence Viewer
	BAB23971	(Get FASTA)	NCBI Sequence Viewer
	BAB26367	(Get FASTA)	NCBI Sequence Viewer
	BAB26684	(Get FASTA)	NCBI Sequence Viewer
	BAB27512	(Get FASTA)	NCBI Sequence Viewer
	BAB27582	(Get FASTA)	NCBI Sequence Viewer
	BAB27608	(Get FASTA)	NCBI Sequence Viewer
	BAB27637	(Get FASTA)	NCBI Sequence Viewer
	BAB27737	(Get FASTA)	NCBI Sequence Viewer
	BAB27891	(Get FASTA)	NCBI Sequence Viewer
	BAB28082	(Get FASTA)	NCBI Sequence Viewer
	BAB30062	(Get FASTA)	NCBI Sequence Viewer
	BAC37210	(Get FASTA)	NCBI Sequence Viewer
	BAE22608	(Get FASTA)	NCBI Sequence Viewer
	BAE40162	(Get FASTA)	NCBI Sequence Viewer
	EDL27753	(Get FASTA)	NCBI Sequence Viewer
	EDL27754	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000049044
	ENSMUSP00000049044.6
GenBank Protein	Q9CQU8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_082536 ⟸ NM_028260
- UniProtKB:	Q3THN4 (UniProtKB/Swiss-Prot), Q9CQU8 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MLRGVLGKAFRLAGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYGIQ RGDIVIAKSPSDPKSNICKRVIGLEGDKILSTSPSDVFKSRSYVPTGHVWLEGDNLQNSTDSRY YGPIPYGLIRGRIFFKIWPFSDFGFLRDSPNGQRFSDD hide sequence

Ensembl Acc Id:

ENSMUSP00000049044 ⟸ ENSMUST00000037499

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9CQU8-F1-model_v2	AlphaFold	Q9CQU8	1-166	view protein structure

Promoters

RGD ID:

6831620

Promoter ID:

MM_KWN:30893

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000111073, NM_028260, OTTMUST00000035858, OTTMUST00000035859

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	2	105,744,536 - 105,745,036 (+)	MPROMDB

RGD ID:

6878142

Promoter ID:

EPDNEW_M2522

Type:

initiation region

Name:

Immp1l_1

Description:

Mus musculus IMP1 inner mitochondrial membrane peptidase-like, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M2523

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	2	105,904,681 - 105,904,741	EPDNEW

RGD ID:

6878144

Promoter ID:

EPDNEW_M2523

Type:

single initiation site

Name:

Immp1l_2

Description:

Mus musculus IMP1 inner mitochondrial membrane peptidase-like, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M2522

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	2	105,915,488 - 105,915,548	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1913791	AgrOrtholog
Ensembl Genes	ENSMUSG00000042670	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000037499	ENTREZGENE
	ENSMUST00000037499.6	UniProtKB/Swiss-Prot
Gene3D-CATH	Umud Fragment, subunit A	UniProtKB/Swiss-Prot
InterPro	LexA/Signal_pep-like_sf	UniProtKB/Swiss-Prot
	Mito_IMP1_subunit	UniProtKB/Swiss-Prot
	Pept_S26A_signal_pept_1	UniProtKB/Swiss-Prot
	Peptidase_S26	UniProtKB/Swiss-Prot
KEGG Report	mmu:66541	UniProtKB/Swiss-Prot
MGD	MGI:1913791	ENTREZGENE
NCBI Gene	66541	ENTREZGENE
PANTHER	MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 1	UniProtKB/Swiss-Prot
	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	UniProtKB/Swiss-Prot
Pfam	Peptidase_S26	UniProtKB/Swiss-Prot
PhenoGen	Immp1l	PhenoGen
PRINTS	LEADERPTASE	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF51306	UniProtKB/Swiss-Prot
UniProt	IMP1L_MOUSE	UniProtKB/Swiss-Prot
	Q3THN4	ENTREZGENE
	Q9CQU8	ENTREZGENE
UniProt Secondary	Q3THN4	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

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Imported Disease Annotations - ClinVar

RGD Manual Annotations