Pcna (proliferating cell nuclear antigen) - Rat Genome Database
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Gene: Pcna (proliferating cell nuclear antigen) Mus musculus
Symbol: Pcna
Name: proliferating cell nuclear antigen
RGD ID: 732095
Description: Is expressed in several structures, including alimentary system; brain; heart; musculoskeletal system; and sensory organ. Orthologous to human PCNA (proliferating cell nuclear antigen); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; base excision repair pathway; INTERACTS WITH (S)-nicotine; 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 1,1-dichloroethene.
Type: protein-coding
Also known as: cyclin
RGD Orthologs
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm18660   Gm18674   Pcna-ps1   Pcna-ps2  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm392132,091,206 - 132,095,100 (-)NCBIGRCm39mm39
GRCm39 Ensembl2132,091,082 - 132,095,234 (-)Ensembl
GRCm382132,249,286 - 132,253,180 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2132,249,162 - 132,253,314 (-)EnsemblGRCm38mm10GRCm38
MGSCv372132,075,022 - 132,078,916 (-)NCBIGRCm37mm9NCBIm37
MGSCv362131,940,727 - 131,944,621 (-)NCBImm8
Celera2133,472,471 - 133,476,365 (-)NCBICelera
Cytogenetic Map2F2NCBI
cM Map264.15NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-alpha-tocopherol  (ISO)
(+)-pilocarpine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(-)-quinic acid  (ISO)
(R)-lipoic acid  (ISO)
(R)-mevalonic acid  (ISO)
(S)-nicotine  (EXP,ISO)
(Z)-3-butylidenephthalide  (ISO)
1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane  (EXP)
1,1-dichloroethene  (EXP)
1,2-dichlorobenzene  (ISO)
1,2-dimethylhydrazine  (EXP,ISO)
1,3-thiazolidine-2,4-dione  (ISO)
1,4-dichlorobenzene  (ISO)
1,4-dioxane  (ISO)
1-chloro-2,4-dinitrobenzene  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrobenzenesulfonic acid  (ISO)
2,4-D  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-di-tert-butyl-4-methylphenol  (EXP)
2-acetamidofluorene  (ISO)
2-nitrofluorene  (ISO)
2-tert-butylhydroquinone  (ISO)
3,3',5-triiodo-L-thyronine  (EXP,ISO)
3-[(4-anilinophenyl)diazenyl]benzene-1-sulfonic acid  (ISO)
3-aminobenzamide  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-hydroxynon-2-enal  (EXP)
4-hydroxyphenyl retinamide  (EXP,ISO)
4-nonylphenol  (ISO)
4-vinylcyclohexene dioxide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-azacytidine  (ISO)
5-fluorouracil  (EXP,ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (EXP,ISO)
5-methyltetrahydrofolic acid  (ISO)
6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (EXP,ISO)
acetamide  (ISO)
acetic acid  (ISO)
acetylsalicylic acid  (ISO)
acrylamide  (ISO)
actinomycin D  (ISO)
afimoxifene  (EXP,ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-amanitin  (ISO)
alpha-hexachlorocyclohexane  (ISO)
aluminium atom  (EXP)
aluminium(0)  (EXP)
alvocidib  (ISO)
amifostine  (EXP)
amiodarone  (ISO)
ammonium chloride  (ISO)
amphibole asbestos  (ISO)
andrographolide  (EXP)
aniline  (EXP,ISO)
anthocyanin  (EXP)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP,ISO)
apigenin  (ISO)
apocynin  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite ion  (ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (EXP,ISO)
artesunate  (ISO)
asiatic acid  (ISO)
atrazine  (ISO)
atropine  (ISO)
avobenzone  (ISO)
azadirachtin A  (ISO)
azathioprine  (ISO)
bathocuproine disulfonic acid  (ISO)
benazepril  (ISO)
benzamide  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
Besigomsin  (EXP)
beta-aminopropionitrile  (ISO)
beta-naphthoflavone  (ISO)
beta-tocopherol  (ISO)
betulinic acid  (ISO)
bezafibrate  (EXP,ISO)
bicalutamide  (ISO)
biphenyl-4-amine  (ISO)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
boric acid  (ISO)
bromocriptine  (ISO)
bromodichloromethane  (EXP,ISO)
bromoform  (EXP)
brucine  (ISO)
budesonide  (EXP)
buspirone  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
calcidiol  (ISO)
calcitriol  (EXP,ISO)
camostat  (EXP)
captafol  (ISO)
carbamate ester  (EXP)
carbon nanotube  (EXP)
carboplatin  (ISO)
cefaloridine  (ISO)
celastrol  (EXP)
celecoxib  (EXP)
cerium trichloride  (ISO)
chelerythrine  (ISO)
Chlorodibromomethane  (EXP)
chloroform  (EXP)
chlorogenic acid  (EXP)
cholic acid  (EXP)
chromium(6+)  (ISO)
chrysin  (ISO)
chrysophanol  (ISO)
cilostazol  (ISO)
Cinobufagin  (ISO)
cisplatin  (EXP,ISO)
citral  (ISO)
clofibrate  (ISO)
cobalt dichloride  (EXP,ISO)
coenzyme Q10  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
corticosterone  (ISO)
cortisol  (ISO)
costunolide  (EXP)
coumarin  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
curcumin  (ISO)
cyanidin cation  (EXP)
cyclohexanols  (ISO)
cycloheximide  (ISO)
cyclophosphamide  (EXP,ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
cypermethrin  (EXP)
cyprodinil  (ISO)
D-glucose  (ISO)
daidzein  (ISO)
dapoxetine  (ISO)
decabromodiphenyl ether  (EXP)
delta-tocopherol  (ISO)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP,ISO)
Diallyl sulfide  (ISO)
diallyl trisulfide  (ISO)
diamminedichloroplatinum  (ISO)
diarsenic trioxide  (EXP,ISO)
diazinon  (ISO)
dibenz[a,h]anthracene  (ISO)
dibenzo[a,l]pyrene  (ISO)
dibutyl phthalate  (EXP,ISO)
dichlorine  (ISO)
dichloroacetic acid  (EXP)
diclofenac  (ISO)
dicrotophos  (ISO)
dieldrin  (ISO)
diethyl maleate  (ISO)
diethylstilbestrol  (EXP,ISO)
diheptyl phthalate  (ISO)
dimethylarsinic acid  (ISO)
diosmin  (ISO)
dioxygen  (ISO)
disodium selenite  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
ellagic acid  (EXP)
embelin  (ISO)
emodin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
entinostat  (EXP)
enzacamene  (ISO)
enzyme inhibitor  (ISO)
Estragole  (ISO)
ethanol  (EXP,ISO)
eugenol  (EXP,ISO)
famotidine  (ISO)
fenofibrate  (EXP,ISO)
finasteride  (ISO)
fipronil  (ISO)
fludioxonil  (ISO)
flutamide  (ISO)
folic acid  (EXP,ISO)
fulvestrant  (EXP,ISO)
furan  (ISO)
gallic acid  (ISO)
gamma-linolenic acid  (ISO)
gamma-tocopherol  (ISO)
gefitinib  (EXP)
gemfibrozil  (ISO)
genistein  (EXP,ISO)
gentamycin  (ISO)
geranial  (ISO)
geraniol  (EXP,ISO)
glucaric acid  (EXP)
glucose  (ISO)
glycitein  (ISO)
glyphosate  (ISO)
hesperetin  (EXP)
hesperidin  (ISO)
hexachlorobenzene  (ISO)
histamine  (EXP)
hydralazine  (ISO)
hydrochlorothiazide  (ISO)
hydrogen chloride  (ISO)
hydrogen peroxide  (ISO)
hydroxyurea  (ISO)
indometacin  (ISO)
irinotecan  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
iron(III) nitrilotriacetate  (ISO)
isoflavones  (ISO)
juglone  (ISO)
kaempferol  (ISO)
kojic acid  (EXP,ISO)
L-ascorbic acid  (EXP,ISO)
L-cysteine  (ISO)
leflunomide  (ISO)
limonene  (ISO)
linsidomine  (EXP)
linuron  (ISO)
lipoic acid  (ISO)
lipopolysaccharide  (EXP)
lithium chloride  (EXP)
lupeol  (EXP)
LY 364947  (EXP)
LY294002  (EXP)
lycopene  (ISO)
mabuterol  (ISO)
malachite green cation  (ISO)
malathion  (ISO)
maneb  (EXP)
masoprocol  (EXP)
Mecamylamine  (ISO)
mechlorethamine  (ISO)
melatonin  (ISO)
meloxicam  (ISO)
menadione  (EXP,ISO)
methapyrilene  (ISO)
methimazole  (EXP,ISO)
methotrexate  (ISO)
methoxychlor  (EXP)
methyl methanesulfonate  (EXP)
methylarsonic acid  (ISO)
methylseleninic acid  (ISO)
methyltestosterone  (ISO)
miconazole  (EXP)
mitomycin C  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
myricitrin  (EXP)
N'-Nitrosonornicotine  (ISO)
N,N-bis(2-hydroxypropyl)nitrosamine  (ISO)
N-acetyl-L-cysteine  (EXP)
N-ethyl-N-nitrosourea  (EXP,ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (EXP,ISO)
N-methyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (EXP,ISO)
nefazodone  (ISO)
nelfinavir  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
nicotine  (EXP,ISO)
nimesulide  (ISO)
nitrofen  (ISO)
nitrogen dioxide  (EXP)
Nutlin-3  (ISO)
ochratoxin A  (ISO)
okadaic acid  (EXP)
oleanolic acid  (EXP,ISO)
omeprazole  (EXP,ISO)
ouabain  (ISO)
ozone  (ISO)
paclitaxel  (EXP,ISO)
palbociclib  (ISO)
pantoprazole  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
parathion  (ISO)
PD 0325901  (EXP)
pentachlorophenol  (EXP)
perfluorobutyric acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (EXP,ISO)
phenylephrine  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
pinosylvin  (ISO)
piperonyl butoxide  (EXP,ISO)
pirinixic acid  (EXP,ISO)
piroxicam  (ISO)
poly(propylene imine) macromolecule  (ISO)
potassium dichromate  (ISO)
potassium iodide  (ISO)
potassium nitrate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
probucol  (EXP)
progesterone  (EXP,ISO)
propiconazole  (EXP)
pterostilbene  (ISO)
pyrithione  (EXP)
pyrogallol  (EXP)
pyrrolidine dithiocarbamate  (ISO)
quercetin  (ISO)
raloxifene  (ISO)
Rebamipide  (ISO)
reserpine  (ISO)
resveratrol  (EXP,ISO)
royal jelly  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP,ISO)
scutellarin  (ISO)
selenium atom  (ISO)
selenomethionine  (EXP)
serpentine asbestos  (ISO)
shikimic acid  (ISO)
Shikonin  (ISO)
silibinin  (EXP)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
silver(1+) nitrate  (ISO)
simvastatin  (ISO)
sirolimus  (EXP,ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
Soman  (ISO)
stavudine  (EXP,ISO)
streptozocin  (ISO)
sulfasalazine  (EXP)
sulforaphane  (ISO)
sulindac  (EXP,ISO)
sulindac sulfone  (EXP)
sunitinib  (ISO)
Swertiamarin  (ISO)
T-2 toxin  (ISO)
tacrolimus hydrate  (EXP)
tamibarotene  (ISO)
tamoxifen  (EXP,ISO)
taurine  (ISO)
terephthalic acid  (ISO)
testosterone  (EXP,ISO)
tetrachlorohydroquinone  (EXP)
tetrachloromethane  (EXP,ISO)
tetrathiomolybdate(2-)  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP,ISO)
thymoquinone  (ISO)
thyroxine  (ISO)
titanium dioxide  (EXP,ISO)
tocopherol  (ISO)
tolcapone  (ISO)
toluene 2,4-diisocyanate  (EXP)
Tomentosin  (ISO)
topotecan  (ISO)
trans-pinosylvin  (ISO)
transplatin  (ISO)
trichloroacetic acid  (EXP)
trichloroethene  (EXP)
triclosan  (EXP)
trimellitic anhydride  (EXP)
trimethylarsine oxide  (ISO)
troglitazone  (EXP,ISO)
tropan-3alpha-yl 3-hydroxy-2-phenylpropanoate  (ISO)
tungsten  (EXP)
tunicamycin  (EXP,ISO)
tyrphostin AG 1478  (ISO)
urethane  (EXP)
ursodeoxycholic acid  (EXP)
valproic acid  (ISO)
vanadium atom  (ISO)
vanadium(0)  (ISO)
vancomycin  (EXP)
vinyl carbamate  (EXP)
vitamin E  (EXP,ISO)
Y-27632  (ISO)
zerumbone  (ISO)
zidovudine  (ISO)
zinc atom  (EXP)
zinc dichloride  (ISO)
zinc sulfate  (ISO)
zinc(0)  (EXP)
zingerone  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View

References - curated
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14. MGD and Homologene mouse data transfer
15. MGD data from the GO Consortium
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20. Pipeline to import KEGG annotations from KEGG into RGD
21. Pipeline to import SMPDB annotations from SMPDB into RGD
22. RGD automated import pipeline
23. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
24. RGD automated import pipeline for gene-chemical interactions
25. Sheen-Chen SM, etal., World J Surg. 2003 Oct;27(10):1161-4. Epub 2003 Aug 18.
26. Skotnicka-Klonowicz G, etal., Eur J Surg Oncol. 2002 Feb;28(1):67-71.
27. Tahan SR, etal., Cancer. 1993 Jun 1;71(11):3552-9.
28. Tazuke Y, etal., Pediatr Surg Int. 2011 Feb;27(2):151-8. doi: 10.1007/s00383-010-2798-8.
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33. Zafar H and Ali S, Arch Biochem Biophys. 2013 Jan 15;529(2):66-74. doi: 10.1016/j.abb.2012.11.008. Epub 2012 Dec 3.
Additional References at PubMed
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PMID:8268661   PMID:8554674   PMID:8617512   PMID:8645597   PMID:8660864   PMID:8672127   PMID:8714088   PMID:8719346   PMID:8906120   PMID:8945939   PMID:8968049   PMID:8991098  
PMID:9038370   PMID:9042536   PMID:9211912   PMID:9216040   PMID:9247261   PMID:9435295   PMID:9467943   PMID:9520423   PMID:9707582   PMID:9753318   PMID:9774970   PMID:9806916  
PMID:9831645   PMID:9852163   PMID:9856457   PMID:9876179   PMID:9922208   PMID:10021345   PMID:10030593   PMID:10079221   PMID:10082561   PMID:10086355   PMID:10096549   PMID:10349636  
PMID:10357937   PMID:10414956   PMID:10430909   PMID:10431239   PMID:10465256   PMID:10521784   PMID:10523863   PMID:10545953   PMID:10567732   PMID:10587573   PMID:10607835   PMID:10627606  
PMID:10640277   PMID:10681000   PMID:10694424   PMID:10700233   PMID:10725239   PMID:10794525   PMID:10821773   PMID:10861287   PMID:10888872   PMID:10891596   PMID:10892744   PMID:10922068  
PMID:10934256   PMID:10980123   PMID:10984614   PMID:11022036   PMID:11023857   PMID:11042159   PMID:11076772   PMID:11076861   PMID:11124115   PMID:11146559   PMID:11152634   PMID:11217851  
PMID:11254358   PMID:11287183   PMID:11296228   PMID:11336497   PMID:11354513   PMID:11390666   PMID:11437453   PMID:11438667   PMID:11532865   PMID:11532916   PMID:11566859   PMID:11566879  
PMID:11702786   PMID:11707574   PMID:11743361   PMID:11784868   PMID:11889045   PMID:11897712   PMID:11934868   PMID:11934988   PMID:11940672   PMID:11942627   PMID:11969263   PMID:11981756  
PMID:12040017   PMID:12063248   PMID:12118260   PMID:12124778   PMID:12142021   PMID:12149478   PMID:12203718   PMID:12217315   PMID:12217325   PMID:12217864   PMID:12397111   PMID:12397180  
PMID:12414734   PMID:12441304   PMID:12464630   PMID:12466851   PMID:12477932   PMID:12485625   PMID:12509454   PMID:12533516   PMID:12573260   PMID:12588846   PMID:12619134   PMID:12638230  
PMID:12666199   PMID:12724834   PMID:12736220   PMID:12756176   PMID:12763576   PMID:12773577   PMID:12782654   PMID:12791271   PMID:12792649   PMID:12798290   PMID:12821380   PMID:12838410  
PMID:12889069   PMID:12895031   PMID:12913077   PMID:12950082   PMID:12970579   PMID:12970760   PMID:14517554   PMID:14610273   PMID:14611631   PMID:14643678   PMID:14645240   PMID:14703996  
PMID:14748698   PMID:14757526   PMID:14964469   PMID:14980515   PMID:15057752   PMID:15070745   PMID:15130516   PMID:15132997   PMID:15133515   PMID:15156143   PMID:15169903   PMID:15177179  
PMID:15198674   PMID:15199130   PMID:15207855   PMID:15229142   PMID:15238450   PMID:15240797   PMID:15259034   PMID:15297379   PMID:15342483   PMID:15369799   PMID:15371305   PMID:15375216  
PMID:15447689   PMID:15469968   PMID:15485910   PMID:15485914   PMID:15489334   PMID:15494374   PMID:15496441   PMID:15557399   PMID:15558479   PMID:15580568   PMID:15614135   PMID:15623348  
PMID:15632069   PMID:15647383   PMID:15713628   PMID:15716344   PMID:15726626   PMID:15782199   PMID:15798182   PMID:15812993   PMID:15857913   PMID:15890234   PMID:15893302   PMID:15893304  
PMID:15893981   PMID:15901773   PMID:15902973   PMID:15937931   PMID:16049172   PMID:16061694   PMID:16110324   PMID:16141072   PMID:16141073   PMID:16141225   PMID:16172982   PMID:16183241  
PMID:16185771   PMID:16236758   PMID:16237170   PMID:16239343   PMID:16288735   PMID:16325169   PMID:16330018   PMID:16340005   PMID:16365040   PMID:16382150   PMID:16400024   PMID:16420439  
PMID:16427040   PMID:16428455   PMID:16432183   PMID:16439479   PMID:16452098   PMID:16480954   PMID:16489008   PMID:16518823   PMID:16552762   PMID:16571727   PMID:16586350   PMID:16603319  
PMID:16611994   PMID:16651659   PMID:16691571   PMID:16698852   PMID:16707790   PMID:16709898   PMID:16736472   PMID:16830225   PMID:16836994   PMID:16837177   PMID:16857592   PMID:16857753  
PMID:16869965   PMID:16908105   PMID:16909126   PMID:16914743   PMID:16920405   PMID:16957075   PMID:17008428   PMID:17021047   PMID:17065231   PMID:17082189   PMID:17082251   PMID:17119023  
PMID:17173068   PMID:17175204   PMID:17182777   PMID:17196193   PMID:17274640   PMID:17276355   PMID:17283043   PMID:17350798   PMID:17360773   PMID:17366632   PMID:17383628   PMID:17424843  
PMID:17447250   PMID:17473172   PMID:17487773   PMID:17560563   PMID:17567962   PMID:17591923   PMID:17599061   PMID:17601530   PMID:17604699   PMID:17656621   PMID:17664295   PMID:17681174  
PMID:17687003   PMID:17699607   PMID:17822691   PMID:17888889   PMID:17893328   PMID:17919464   PMID:18005957   PMID:18028902   PMID:18033766   PMID:18043734   PMID:18053235   PMID:18065723  
PMID:18067859   PMID:18082678   PMID:18089935   PMID:18090917   PMID:18156176   PMID:18159003   PMID:18162470   PMID:18181179   PMID:18184726   PMID:18213577   PMID:18258849   PMID:18265020  
PMID:18289368   PMID:18307411   PMID:18319261   PMID:18321928   PMID:18329286   PMID:18331714   PMID:18339674   PMID:18340042   PMID:18356167   PMID:18356246   PMID:18366138   PMID:18373617  
PMID:18385133   PMID:18393386   PMID:18424556   PMID:18446812   PMID:18453534   PMID:18455718   PMID:18498095   PMID:18533146   PMID:18591393   PMID:18592162   PMID:18597638   PMID:18651664  
PMID:18667463   PMID:18676373   PMID:18684741   PMID:18692037   PMID:18710724   PMID:18776146   PMID:18778483   PMID:18784653   PMID:18786355   PMID:18787044   PMID:18819932   PMID:18829740  
PMID:18843087   PMID:18854411   PMID:18940587   PMID:18955481   PMID:18977342   PMID:18997111   PMID:19023449   PMID:19038999   PMID:19081073   PMID:19091986   PMID:19109974   PMID:19114063  
PMID:19150975   PMID:19191219   PMID:19213844   PMID:19218784   PMID:19224984   PMID:19233155   PMID:19297558   PMID:19389373   PMID:19403657   PMID:19409883   PMID:19416500   PMID:19416922  
PMID:19419974   PMID:19423573   PMID:19435814   PMID:19470461   PMID:19513100   PMID:19536134   PMID:19536807   PMID:19590010   PMID:19605502   PMID:19620979   PMID:19633665   PMID:19657336  
PMID:19661150   PMID:19696014   PMID:19705444   PMID:19726564   PMID:19749746   PMID:19799774   PMID:19816249   PMID:19885588   PMID:19901081   PMID:19923290   PMID:19948250   PMID:19948886  
PMID:20019802   PMID:20021484   PMID:20051123   PMID:20071335   PMID:20097160   PMID:20170518   PMID:20179096   PMID:20188178   PMID:20209053   PMID:20215348   PMID:20237275   PMID:20332116  
PMID:20335364   PMID:20360068   PMID:20410112   PMID:20417598   PMID:20440000   PMID:20463215   PMID:20531390   PMID:20534673   PMID:20613874   PMID:20652949   PMID:20696760   PMID:20696915  
PMID:20702706   PMID:20737593   PMID:20805501   PMID:20807801   PMID:20830701   PMID:20843830   PMID:20863901   PMID:20883684   PMID:20930145   PMID:20943929   PMID:20950430   PMID:20969845  
PMID:20975039   PMID:21071672   PMID:21093383   PMID:21114965   PMID:21138975   PMID:21146511   PMID:21147849   PMID:21185283   PMID:21194568   PMID:21216305   PMID:21228373   PMID:21245411  
PMID:21246661   PMID:21248711   PMID:21253613   PMID:21267068   PMID:21269891   PMID:21270055   PMID:21289193   PMID:21289216   PMID:21304913   PMID:21319224   PMID:21344488   PMID:21354128  
PMID:21371421   PMID:21383776   PMID:21415862   PMID:21436036   PMID:21464123   PMID:21483770   PMID:21513708   PMID:21518694   PMID:21557453   PMID:21560315   PMID:21561989   PMID:21562282  
PMID:21613322   PMID:21624478   PMID:21655083   PMID:21655085   PMID:21681813   PMID:21690373   PMID:21731673   PMID:21750040   PMID:21762405   PMID:21765887   PMID:21798254   PMID:21830221  
PMID:21841314   PMID:21844366   PMID:21852425   PMID:21873635   PMID:21889916   PMID:21921234   PMID:21922246   PMID:21931560   PMID:21965329   PMID:21976438   PMID:21984813   PMID:22076439  
PMID:22094257   PMID:22096573   PMID:22101279   PMID:22154935   PMID:22171059   PMID:22223678   PMID:22228179   PMID:22237799   PMID:22244149   PMID:22264791   PMID:22266795   PMID:22318228  
PMID:22354994   PMID:22360968   PMID:22363445   PMID:22378764   PMID:22393258   PMID:22411557   PMID:22457635   PMID:22491411   PMID:22505032   PMID:22507129   PMID:22511778   PMID:22522401  
PMID:22536403   PMID:22542602   PMID:22560297   PMID:22588720   PMID:22679001   PMID:22714890   PMID:22837015   PMID:22843703   PMID:22844494   PMID:22898775   PMID:22962254   PMID:22991444  
PMID:22996691   PMID:23028343   PMID:23060247   PMID:23147502   PMID:23180766   PMID:23201573   PMID:23223288   PMID:23233348   PMID:23238123   PMID:23284756   PMID:23308088   PMID:23319657  
PMID:23326536   PMID:23342106   PMID:23372771   PMID:23376610   PMID:23386589   PMID:23393595   PMID:23447624   PMID:23463509   PMID:23467409   PMID:23471215   PMID:23518926   PMID:23537899  
PMID:23542581   PMID:23555635   PMID:23563309   PMID:23565059   PMID:23603510   PMID:23615279   PMID:23637774   PMID:23652001   PMID:23680462   PMID:23775842   PMID:23798389   PMID:23895934  
PMID:23948251   PMID:23976951   PMID:23994637   PMID:24038449   PMID:24056368   PMID:24073291   PMID:24095902   PMID:24115439   PMID:24142690   PMID:24301385   PMID:24332809   PMID:24356953  
PMID:24391734   PMID:24401276   PMID:24440154   PMID:24453340   PMID:24457600   PMID:24478334   PMID:24492243   PMID:24496614   PMID:24503550   PMID:24523460   PMID:24550287   PMID:24550361  
PMID:24553289   PMID:24637075   PMID:24639535   PMID:24661562   PMID:24662053   PMID:24671879   PMID:24686458   PMID:24699724   PMID:24726645   PMID:24727670   PMID:24771701   PMID:24778262  
PMID:24793032   PMID:24798493   PMID:24899707   PMID:25030234   PMID:25043473   PMID:25050931   PMID:25184665   PMID:25209981   PMID:25220458   PMID:25245017   PMID:25458011   PMID:25514040  
PMID:25609427   PMID:25681586   PMID:25703143   PMID:25759216   PMID:25774556   PMID:25845979   PMID:25888505   PMID:25989023   PMID:25993027   PMID:26010446   PMID:26063791   PMID:26063905  
PMID:26113728   PMID:26120030   PMID:26158450   PMID:26163006   PMID:26220976   PMID:26252542   PMID:26290337   PMID:26365490   PMID:26435415   PMID:26449752   PMID:26496610   PMID:26545946  
PMID:26600503   PMID:26655880   PMID:26657772   PMID:26718736   PMID:26733533   PMID:26745185   PMID:26783108   PMID:26795561   PMID:26799792   PMID:26887372   PMID:26966181   PMID:26989177  
PMID:27001308   PMID:27015986   PMID:27035511   PMID:27179789   PMID:27185863   PMID:27194326   PMID:27196371   PMID:27217206   PMID:27476503   PMID:27564454   PMID:27616714   PMID:27666725  
PMID:27741240   PMID:27857213   PMID:27907249   PMID:28036337   PMID:28049824   PMID:28123024   PMID:28254491   PMID:28323137   PMID:28334952   PMID:28378742   PMID:28432216   PMID:28484278  
PMID:28492365   PMID:28524856   PMID:28634819   PMID:28706196   PMID:28761001   PMID:28793255   PMID:28811219   PMID:28977598   PMID:29044125   PMID:29240767   PMID:29510343   PMID:29637597  
PMID:29698519   PMID:29712641   PMID:29751817   PMID:29754823   PMID:29768039   PMID:29795630   PMID:29853617   PMID:29955894   PMID:29967292   PMID:30008325   PMID:30022023   PMID:30037926  
PMID:30093555   PMID:30200414   PMID:30266827   PMID:30268758   PMID:30333137   PMID:30338292   PMID:30348983   PMID:30389913   PMID:30389914   PMID:30457570   PMID:30538199   PMID:30578393  
PMID:30595499   PMID:30635284   PMID:30664861   PMID:30668728   PMID:30713523   PMID:30897080   PMID:31002540   PMID:31024075   PMID:31100714   PMID:31167144   PMID:31197108   PMID:31202705  
PMID:31212972   PMID:31231364   PMID:31286143   PMID:31311865   PMID:31586559   PMID:31634485   PMID:31670387   PMID:31676717   PMID:31748268   PMID:31749402   PMID:31759980   PMID:31835801  
PMID:31844668   PMID:31953387   PMID:31968244   PMID:32123907   PMID:32155439   PMID:32161758   PMID:32320893   PMID:32325033   PMID:32758484   PMID:32840212   PMID:32888487   PMID:33073849  
PMID:33080014   PMID:33147210  


Comparative Map Data
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm392132,091,206 - 132,095,100 (-)NCBIGRCm39mm39
GRCm39 Ensembl2132,091,082 - 132,095,234 (-)Ensembl
GRCm382132,249,286 - 132,253,180 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2132,249,162 - 132,253,314 (-)EnsemblGRCm38mm10GRCm38
MGSCv372132,075,022 - 132,078,916 (-)NCBIGRCm37mm9NCBIm37
MGSCv362131,940,727 - 131,944,621 (-)NCBImm8
Celera2133,472,471 - 133,476,365 (-)NCBICelera
Cytogenetic Map2F2NCBI
cM Map264.15NCBI
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38.p13 Ensembl205,114,953 - 5,126,626 (-)EnsemblGRCh38hg38GRCh38
GRCh38205,114,953 - 5,126,622 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37205,095,599 - 5,107,268 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36205,043,599 - 5,055,268 (-)NCBINCBI36hg18NCBI36
Build 34205,043,598 - 5,048,647NCBI
Celera205,165,620 - 5,177,289 (-)NCBI
Cytogenetic Map20p12.3NCBI
HuRef205,049,534 - 5,061,197 (-)NCBIHuRef
CHM1_1205,096,983 - 5,108,646 (-)NCBICHM1_1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
mRatBN7.23119,499,039 - 119,502,911 (-)NCBI
Rnor_6.0 Ensembl3124,880,698 - 124,884,570 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.03124,880,698 - 124,884,570 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03131,376,235 - 131,380,108 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43120,008,715 - 120,012,589 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13119,914,289 - 119,918,243 (-)NCBI
Celera3118,296,567 - 118,300,439 (-)NCBICelera
RH 3.4 Map31023.4RGD
Cytogenetic Map3q36NCBI
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
ChiLan1.0 EnsemblNW_00495541515,744,601 - 15,749,673 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541515,744,601 - 15,748,910 (-)NCBIChiLan1.0ChiLan1.0
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
PanPan1.1204,927,731 - 4,939,440 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl204,927,731 - 4,939,440 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0205,134,930 - 5,146,603 (-)NCBIMhudiblu_PPA_v0panPan3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
CanFam3.1 Ensembl2416,478,769 - 16,484,992 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12416,478,774 - 16,485,992 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
SpeTri2.0NW_00493648513,766,221 - 13,771,215 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
Sscrofa11.1 Ensembl1714,125,814 - 14,185,276 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11714,137,746 - 14,142,584 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21715,127,978 - 15,132,806 (-)NCBISscrofa10.2Sscrofa10.2susScr3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
ChlSab1.1232,936,600 - 32,953,635 (+)NCBI
ChlSab1.1 Ensembl232,948,196 - 32,953,991 (+)Ensembl
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
HetGla 1.0NW_0046247416,143,584 - 6,148,055 (-)NCBI

Position Markers
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38199,284,216 - 9,284,447UniSTSGRCm38
GRCm382132,249,334 - 132,249,564UniSTSGRCm38
MGSCv37199,358,706 - 9,358,937UniSTSGRCm37
MGSCv372132,075,070 - 132,075,300UniSTSGRCm37
Celera2133,472,519 - 133,472,749UniSTS
Celera1910,365,217 - 10,365,448UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map2F2UniSTS
cM Map195.0UniSTS
cM Map275.0UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38199,283,748 - 9,283,839UniSTSGRCm38
MGSCv37199,358,238 - 9,358,329UniSTSGRCm37
Celera1910,365,825 - 10,365,916UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map2F2UniSTS
cM Map195.0UniSTS
cM Map275.0UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382132,250,195 - 132,250,757UniSTSGRCm38
MGSCv372132,075,931 - 132,076,493UniSTSGRCm37
Celera2133,473,380 - 133,473,942UniSTS
Cytogenetic Map2F2UniSTS
cM Map275.0UniSTS
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38199,283,766 - 9,283,985UniSTSGRCm38
GRCm382132,249,873 - 132,251,438UniSTSGRCm38
MGSCv372132,075,609 - 132,077,174UniSTSGRCm37
MGSCv37199,358,256 - 9,358,475UniSTSGRCm37
Celera1910,365,679 - 10,365,898UniSTS
Celera2133,473,058 - 133,474,623UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map2F2UniSTS
cM Map195.0UniSTS

QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224334620148858457Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229417935148533014Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245457623145470727Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)262000000137000000Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265439402162677006Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284182854148680255Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284182854148825550Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285893925181254801Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294400000154400000Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100993579134993788Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2101112449135112609Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2101112449135112609Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2101112449135112609Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102800000160100000Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103265371167370436Mouse
1301825Pbrgcsf1_mperipheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)Not determined2106391660140391809Mouse
10043875Bw25_mbody weight QTL 25 (mouse)Not determined2107413756141413756Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110647738144647887Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2111085773154512747Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111331784145331901Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111331784145331901Mouse
1301905Lgth2_mbody length 2 (mouse)Not determined2111331784145331901Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111331784145331901Mouse
1301201Chab1_mcholesterol absorption 1 (mouse)Not determined2111709108145709243Mouse
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111781466145781606Mouse
11038699Ltpr2b_mLeishmania tropica response 2b (mouse)2112370826146371085Mouse
11038700Ltpr2a_mLeishmania tropica response 2a (mouse)2112370826146371085Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112370826146371085Mouse
1301029T2dm3_mtype 2 diabetes mellitus 3 (mouse)Not determined2114457594132872237Mouse
11038696Ltpr2f_mLeishmania tropica response 2f (mouse)2115370937149371074Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115370937149371074Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116235703150235821Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116464410150464554Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2118112449174483070Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118758772160769245Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118758772160769245Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118758772160769245Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118758772160769245Mouse
1300712El2_mepilepsy 2 (mouse)Not determined2122376665142690215Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2123041095157041211Mouse
1301066Otx2m2_morthodenticle homolog 2 (Drosophila) modifier 2 (mouse)Not determined2123390053148858457Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2124095391158095504Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124600000168400000Mouse
13506763Tbvq1_mtrabecular bone volume QTL 1 (mouse)2126200000135600000Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127822099161822198Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127822099161822198Mouse
1558989Gnf4_mgrowth and fatness 4 (mouse)Not determined2128331784132872237Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129500000163500000Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132182239166182410Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:515
Count of miRNA genes:374
Interacting mature miRNAs:428
Transcripts:ENSMUST00000028817, ENSMUST00000135181, ENSMUST00000136676, ENSMUST00000140338, ENSMUST00000149627
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.



Nucleotide Sequences
RefSeq Transcripts NM_011045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK012614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL807793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X53068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X57800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X75358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000028817   ⟹   ENSMUSP00000028817
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2132,249,162 - 132,253,314 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135181
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2132,251,329 - 132,252,967 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136676
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2132,249,877 - 132,252,596 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140338
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2132,249,162 - 132,250,170 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149627
RefSeq Status:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl2132,251,429 - 132,252,602 (-)Ensembl
RefSeq Acc Id: NM_011045   ⟹   NP_035175
Mouse AssemblyChrPosition (strand)Source
GRCm392132,091,206 - 132,095,100 (-)NCBI
GRCm382132,249,286 - 132,253,180 (-)ENTREZGENE
MGSCv372132,075,022 - 132,078,916 (-)RGD
Celera2133,472,471 - 133,476,365 (-)RGD
Reference Sequences
RefSeq Acc Id: NP_035175   ⟸   NM_011045
- UniProtKB: P17918 (UniProtKB/Swiss-Prot),   Q542J9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000028817   ⟸   ENSMUST00000028817
Protein Domains

RGD ID:6832013
Promoter ID:MM_KWN:31841
SO ACC ID:SO:0000170
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour
Mouse AssemblyChrPosition (strand)Source
MGSCv362132,075,656 - 132,076,857 (-)MPROMDB
RGD ID:6832033
Promoter ID:MM_KWN:31842
SO ACC ID:SO:0000170
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000036927,   OTTMUST00000036928,   OTTMUST00000036929,   OTTMUST00000036930,   OTTMUST00000036942
Mouse AssemblyChrPosition (strand)Source
MGSCv362132,077,256 - 132,079,242 (-)MPROMDB
RGD ID:6878848
Promoter ID:EPDNEW_M2872
Type:initiation region
Description:Mus musculus proliferating cell nuclear antigen , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Mouse AssemblyChrPosition (strand)Source
GRCm382132,253,180 - 132,253,240EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97503 AgrOrtholog
Ensembl Genes ENSMUSG00000027342 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000028817 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000028817 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro Pr_cel_nuc_antig UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pr_cel_nuc_antig_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pr_cel_nuc_antig_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pr_cel_nuc_antig_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18538 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PCNA_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PCNA_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pcna PhenoGen
PROSITE PCNA_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PCNA_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs pcna UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt P17918 ENTREZGENE, UniProtKB/Swiss-Prot