Pcyox1 (prenylcysteine oxidase 1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Pcyox1 (prenylcysteine oxidase 1) Mus musculus
Analyze
Symbol: Pcyox1
Name: prenylcysteine oxidase 1
RGD ID: 733109
MGI Page MGI
Description: Enables prenylcysteine oxidase activity. Acts upstream of or within prenylcysteine catabolic process. Located in lysosome. Is expressed in several structures, including genitourinary system; integumental system; limb; nervous system; and respiratory system. Orthologous to human PCYOX1 (prenylcysteine oxidase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1200015P13Rik; AI115532; AI448340; PC; PCL1; Pcly; prenylcysteine lyase; prenylcysteine oxidase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39686,362,988 - 86,374,132 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl686,362,988 - 86,374,136 (-)EnsemblGRCm39 Ensembl
GRCm38686,386,006 - 86,397,150 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl686,386,006 - 86,397,154 (-)EnsemblGRCm38mm10GRCm38
MGSCv37686,336,000 - 86,347,144 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36686,352,491 - 86,362,754 (-)NCBIMGSCv36mm8
Celera688,323,385 - 88,334,467 (-)NCBICelera
Cytogenetic Map6D1NCBI
cM Map637.69NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
Weight Gain  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,6-dinitrotoluene  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxynon-2-enal  (EXP)
acetamide  (ISO)
aconitine  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
benzene  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
butanal  (ISO)
cannabidiol  (ISO)
carbon nanotube  (EXP)
cisplatin  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (EXP,ISO)
Dibutyl phosphate  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
flutamide  (ISO)
folic acid  (EXP)
gentamycin  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
lead diacetate  (EXP)
lipopolysaccharide  (ISO)
methapyrilene  (ISO)
methotrexate  (ISO)
methoxychlor  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
nickel atom  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorononanoic acid  (ISO)
phenytoin  (ISO)
pirinixic acid  (EXP)
potassium dichromate  (ISO)
rimonabant  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (EXP,ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP,ISO)
thiram  (ISO)
tributylstannane  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12151402   PMID:12477932   PMID:12904583   PMID:14681479   PMID:15368895   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16944957   PMID:18287559   PMID:21267068   PMID:21873635   PMID:29514215   PMID:30550785   PMID:31146259   PMID:32325033   PMID:34548610   PMID:35269975  
PMID:37839992  


Genomics

Comparative Map Data
Pcyox1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39686,362,988 - 86,374,132 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl686,362,988 - 86,374,136 (-)EnsemblGRCm39 Ensembl
GRCm38686,386,006 - 86,397,150 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl686,386,006 - 86,397,154 (-)EnsemblGRCm38mm10GRCm38
MGSCv37686,336,000 - 86,347,144 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36686,352,491 - 86,362,754 (-)NCBIMGSCv36mm8
Celera688,323,385 - 88,334,467 (-)NCBICelera
Cytogenetic Map6D1NCBI
cM Map637.69NCBI
PCYOX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38270,257,915 - 70,281,185 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl270,257,386 - 70,281,185 (+)EnsemblGRCh38hg38GRCh38
GRCh37270,485,269 - 70,508,317 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36270,338,797 - 70,360,731 (+)NCBINCBI36Build 36hg18NCBI36
Build 34270,396,943 - 70,418,866NCBI
Celera270,335,922 - 70,359,008 (+)NCBICelera
Cytogenetic Map2p13.3NCBI
HuRef270,222,037 - 70,245,162 (+)NCBIHuRef
CHM1_1270,414,817 - 70,437,898 (+)NCBICHM1_1
T2T-CHM13v2.0270,269,656 - 70,292,921 (+)NCBIT2T-CHM13v2.0
Pcyox1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84120,389,545 - 120,400,382 (-)NCBIGRCr8
mRatBN7.24118,832,114 - 118,842,951 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4118,830,638 - 118,842,951 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4124,304,788 - 124,315,641 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04120,079,535 - 120,090,388 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04118,703,792 - 118,714,645 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04118,187,133 - 118,198,029 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4118,187,134 - 118,198,029 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04182,758,383 - 182,769,279 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44120,569,436 - 120,580,273 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14120,812,433 - 120,824,736 (-)NCBI
Celera4107,803,829 - 107,814,666 (-)NCBICelera
Cytogenetic Map4q34NCBI
Pcyox1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542414,855,106 - 14,865,840 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542414,854,755 - 14,865,920 (-)NCBIChiLan1.0ChiLan1.0
PCYOX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21256,117,040 - 56,139,532 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A56,120,985 - 56,143,461 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A70,313,204 - 70,335,361 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A71,429,520 - 71,449,292 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A71,429,514 - 71,449,292 (+)Ensemblpanpan1.1panPan2
PCYOX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11068,806,611 - 68,825,941 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1068,806,572 - 68,823,291 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1068,694,892 - 68,713,751 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01069,828,762 - 69,847,879 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1069,828,743 - 69,847,878 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11069,546,356 - 69,565,212 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01069,808,868 - 69,828,327 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01070,108,248 - 70,127,207 (+)NCBIUU_Cfam_GSD_1.0
Pcyox1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629214,131,693 - 14,148,615 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649114,422,638 - 14,439,569 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649114,422,683 - 14,439,599 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PCYOX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl372,207,408 - 72,223,581 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1372,207,406 - 72,223,605 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2375,478,452 - 75,494,635 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PCYOX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11436,840,056 - 36,859,114 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1436,841,327 - 36,859,079 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604575,151,759 - 75,172,308 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pcyox1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247623,167,661 - 3,175,679 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247623,164,320 - 3,175,760 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pcyox1
339 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1418
Count of miRNA genes:684
Interacting mature miRNAs:856
Transcripts:ENSMUST00000032065, ENSMUST00000129650, ENSMUST00000131500, ENSMUST00000153723
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671958006105958152Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67707698389976982Mouse
10412119Stv_mstriatal volumne (mouse)Not determined660026991100026967Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671958006105958152Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67797698396976961Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
12792979Fbmd2_mfemoral bone mineral density 2, females only (mouse)675026989115026943Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67552133992584431Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67552133994202936Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65842456692424693Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671552042105552160Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67129960593441074Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64529099387403016Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5435041188356155Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675424566104480516Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65851741692517416Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63864656092584431Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684099474118099474Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675584287109584431Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670402880104403016Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652138693116132228Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670402880104403016Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676440930110441074Mouse
15039373Adip28_madiposity 28 (mouse)65628519490285194Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65628519490285194Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66346172197461888Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675693484109693678Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666690851100691013Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670402880104403016Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681476981102176961Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67552133994202936Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66003466394034782Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678606487121092347Mouse

Markers in Region
AI448340  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38686,386,849 - 86,387,030UniSTSGRCm38
MGSCv37686,336,843 - 86,337,024UniSTSGRCm37
Celera688,324,230 - 88,324,411UniSTS
Cytogenetic Map6D1UniSTS
Whitehead/MRC_RH6892.87UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC153374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC155947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000032065   ⟹   ENSMUSP00000032065
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl686,362,988 - 86,374,136 (-)Ensembl
GRCm38.p6 Ensembl686,386,006 - 86,397,154 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129650
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl686,371,500 - 86,373,608 (-)Ensembl
GRCm38.p6 Ensembl686,394,518 - 86,396,626 (-)Ensembl
Ensembl Acc Id: ENSMUST00000131500   ⟹   ENSMUSP00000122602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl686,365,971 - 86,369,325 (-)Ensembl
GRCm38.p6 Ensembl686,388,989 - 86,392,343 (-)Ensembl
Ensembl Acc Id: ENSMUST00000153723   ⟹   ENSMUSP00000119449
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl686,368,666 - 86,374,125 (-)Ensembl
GRCm38.p6 Ensembl686,391,684 - 86,397,143 (-)Ensembl
Ensembl Acc Id: ENSMUST00000203960
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl686,372,765 - 86,374,101 (-)Ensembl
GRCm38.p6 Ensembl686,395,783 - 86,397,119 (-)Ensembl
Ensembl Acc Id: ENSMUST00000204116   ⟹   ENSMUSP00000145474
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl686,365,653 - 86,374,123 (-)Ensembl
GRCm38.p6 Ensembl686,388,671 - 86,397,141 (-)Ensembl
RefSeq Acc Id: NM_001355687   ⟹   NP_001342616
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39686,362,988 - 86,374,132 (-)NCBI
GRCm38686,386,006 - 86,397,150 (-)NCBI
Sequence:
RefSeq Acc Id: NM_025823   ⟹   NP_080099
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39686,362,988 - 86,374,132 (-)NCBI
GRCm38686,386,006 - 86,397,150 (-)NCBI
MGSCv37686,336,000 - 86,347,144 (-)RGD
Celera688,323,385 - 88,334,467 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_080099   ⟸   NM_025823
- Peptide Label: isoform 1 precursor
- UniProtKB: Q69ZW0 (UniProtKB/Swiss-Prot),   Q3UHV6 (UniProtKB/Swiss-Prot),   Q8BZX1 (UniProtKB/Swiss-Prot),   Q9CQF9 (UniProtKB/Swiss-Prot),   Q3UYP2 (UniProtKB/TrEMBL),   Q3TVT6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001342616   ⟸   NM_001355687
- Peptide Label: isoform 2 precursor
- UniProtKB: Q99JK4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000145474   ⟸   ENSMUST00000204116
Ensembl Acc Id: ENSMUSP00000032065   ⟸   ENSMUST00000032065
Ensembl Acc Id: ENSMUSP00000122602   ⟸   ENSMUST00000131500
Ensembl Acc Id: ENSMUSP00000119449   ⟸   ENSMUST00000153723
Protein Domains
Prenylcysteine lyase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CQF9-F1-model_v2 AlphaFold Q9CQF9 1-505 view protein structure

Promoters
RGD ID:6839732
Promoter ID:MM_KWN:46730
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_025823,   OTTMUST00000056867,   OTTMUST00000056868
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36686,346,046 - 86,347,147 (-)MPROMDB
RGD ID:6890276
Promoter ID:EPDNEW_M8589
Type:initiation region
Name:Pcyox1_1
Description:Mus musculus prenylcysteine oxidase 1 , transcript variant 1,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38686,397,105 - 86,397,165EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914131 AgrOrtholog
Ensembl Genes ENSMUSG00000029998 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032065 ENTREZGENE
  ENSMUST00000032065.15 UniProtKB/Swiss-Prot
  ENSMUST00000131500.2 UniProtKB/TrEMBL
  ENSMUST00000153723.3 UniProtKB/TrEMBL
  ENSMUST00000204116.2 UniProtKB/TrEMBL
Gene3D-CATH 3.50.50.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FAD/NAD-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prenylcys_lyase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prenylcysteine_Oxase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66881 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1914131 ENTREZGENE
NCBI Gene 66881 ENTREZGENE
PANTHER PRENYLCYSTEINE OXIDASE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15944 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam NAD_binding_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prenylcys_lyase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pcyox1 PhenoGen
PIRSF Prenylcysteine_oxidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF51905 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SWD3_MOUSE UniProtKB/TrEMBL
  D3Z275_MOUSE UniProtKB/TrEMBL
  F7CIP8_MOUSE UniProtKB/TrEMBL
  PCYOX_MOUSE UniProtKB/Swiss-Prot
  Q3TVT6 ENTREZGENE, UniProtKB/TrEMBL
  Q3UHV6 ENTREZGENE
  Q3UYP2 ENTREZGENE, UniProtKB/TrEMBL
  Q69ZW0 ENTREZGENE
  Q8BZX1 ENTREZGENE
  Q99JK4 ENTREZGENE, UniProtKB/TrEMBL
  Q9CQF9 ENTREZGENE
UniProt Secondary Q3UHV6 UniProtKB/Swiss-Prot
  Q69ZW0 UniProtKB/Swiss-Prot
  Q8BZX1 UniProtKB/Swiss-Prot