Ceacam1 (carcinoembryonic antigen-related cell adhesion molecule 1) - Rat Genome Database

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Gene: Ceacam1 (carcinoembryonic antigen-related cell adhesion molecule 1) Mus musculus
Analyze
Symbol: Ceacam1
Name: carcinoembryonic antigen-related cell adhesion molecule 1
RGD ID: 10240
MGI Page MGI
Description: Enables several functions, including signaling receptor binding activity; virion binding activity; and virus receptor activity. Involved in several processes, including common myeloid progenitor cell proliferation; granulocyte colony-stimulating factor signaling pathway; and negative regulation of macromolecule metabolic process. Acts upstream of or within several processes, including modulation by host of viral process; regulation of T cell activation; and regulation of intracellular signal transduction. Located in cell projection membrane; external side of plasma membrane; and extracellular space. Is expressed in several structures, including alimentary system; central nervous system; extraembryonic component; genitourinary system; and skeleton. Orthologous to several human genes including CEACAM1 (CEA cell adhesion molecule 1); INTERACTS WITH (S)-nicotine; 1,2-dimethylhydrazine; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: bb-1; Bg; Bgp; BGP-1; Bgp1; biliary glycoprotein 1; biliary glycoprotein D; C-CA; C-CAM; carcinoembryonic antigen 1; carcinoembryonic antigen 7; Cc1; CD66; CD66a; Cea; Cea-; Cea-1; Cea-7; CEA-related cell adhesion molecule 1; Cea1; Cea7; hepatitis virus (MHV-4) susceptibility; hepatitis virus receptor; Hv; Hv-; Hv-2; Hv2; mCEA; mCEA1; MHV; Mhv-; Mhv-1; MHV-R; MHVR; MHVR1; mmCGM1; mmCGM1a; mmCGM2; murine hepatitis virus receptor
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm19126  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39725,161,127 - 25,177,072 (-)NCBIGRCm39mm39
GRCm39 Ensembl725,161,132 - 25,177,028 (-)Ensembl
GRCm38725,461,702 - 25,477,647 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl725,461,707 - 25,477,603 (-)EnsemblGRCm38mm10GRCm38
MGSCv37726,246,721 - 26,262,644 (-)NCBIGRCm37mm9NCBIm37
MGSCv36725,170,462 - 25,186,385 (-)NCBImm8
Celera720,077,172 - 20,093,096 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map713.84NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-demecolcine  (ISO)
(S)-nicotine  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3,4-dichloroaniline  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
7,12-dimethyltetraphene  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
aristolochic acid  (ISO)
Azaspiracid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
bisphenol F  (EXP)
buspirone  (ISO)
butanal  (ISO)
calciol  (EXP)
calcitriol  (ISO)
camptothecin  (ISO)
chloroprene  (EXP)
chromium(6+)  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
clofibric acid  (ISO)
cocaine  (ISO)
crocidolite asbestos  (EXP,ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (ISO)
daunorubicin  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (EXP)
dinophysistoxin 1  (ISO)
diuron  (ISO)
doramapimod  (ISO)
entinostat  (ISO)
erythromycin estolate  (ISO)
ethyl methanesulfonate  (ISO)
etoposide  (ISO)
flurbiprofen  (EXP)
flutamide  (ISO)
folic acid  (ISO)
folpet  (EXP)
formaldehyde  (ISO)
fumonisin B1  (EXP)
furan  (ISO)
genistein  (EXP,ISO)
glafenine  (ISO)
glucose  (ISO)
hydrazines  (EXP)
hydrogen cyanide  (EXP)
hydrogen peroxide  (ISO)
hydroquinone O-beta-D-glucopyranoside  (ISO)
ibuprofen  (ISO)
isotretinoin  (ISO)
kainic acid  (EXP)
kojic acid  (ISO)
lead diacetate  (EXP,ISO)
leflunomide  (ISO)
methapyrilene  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
N-nitrosodiethylamine  (ISO)
N-Nitrosopyrrolidine  (ISO)
nefazodone  (ISO)
nicotine  (EXP)
nimesulide  (ISO)
nitrofen  (ISO)
O-methyleugenol  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
p-toluidine  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP)
potassium cyanide  (EXP)
progesterone  (ISO)
propiconazole  (EXP)
quinidine  (ISO)
resveratrol  (ISO)
rofecoxib  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (EXP)
Tesaglitazar  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP,ISO)
theophylline  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
troglitazone  (EXP)
tungsten  (EXP)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vincristine  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
zingerone  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
bile acid and bile salt transport  (ISO)
blood vessel development  (IMP)
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules  (IDA)
calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules  (IDA)
cell adhesion  (ISO)
cell-cell adhesion via plasma-membrane adhesion molecules  (ISO)
cell-cell junction organization  (IMP)
cellular response to insulin stimulus  (ISO)
common myeloid progenitor cell proliferation  (IMP)
granulocyte colony-stimulating factor signaling pathway  (IMP)
homophilic cell adhesion via plasma membrane adhesion molecules  (IDA,ISO)
insulin catabolic process  (IMP,ISO)
insulin receptor internalization  (ISO)
negative regulation by host of viral genome replication  (IMP)
negative regulation by host of viral process  (IDA,IMP)
negative regulation of bone resorption  (IMP)
negative regulation of cytokine production  (IMP)
negative regulation of cytotoxic T cell degranulation  (ISO)
negative regulation of fatty acid biosynthetic process  (ISO)
negative regulation of granulocyte differentiation  (IMP)
negative regulation of hepatocyte proliferation  (IMP,ISO)
negative regulation of interleukin-1 production  (IMP)
negative regulation of interleukin-2 production  (IMP)
negative regulation of JNK cascade  (IMP)
negative regulation of lipid biosynthetic process  (IMP)
negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target  (IMP)
negative regulation of osteoclast differentiation  (IMP)
negative regulation of platelet aggregation  (IMP)
negative regulation of protein kinase activity  (IMP)
negative regulation of T cell mediated cytotoxicity  (ISO)
negative regulation of T cell proliferation  (IMP)
negative regulation of T cell receptor signaling pathway  (ISO)
negative regulation of vascular permeability  (IMP)
Peyer's patch development  (IMP)
positive regulation by host of viral process  (IMP)
positive regulation of activation-induced cell death of T cells  (IMP)
positive regulation of calcineurin-NFAT signaling cascade  (IMP)
positive regulation of CD4-positive, alpha-beta T cell activation  (IMP)
positive regulation of CD4-positive, alpha-beta T cell proliferation  (IMP)
positive regulation of CD8-positive, alpha-beta T cell activation  (IMP)
positive regulation of homophilic cell adhesion  (ISO)
positive regulation of immunoglobulin production  (IMP)
positive regulation of JNK cascade  (IDA)
positive regulation of MAP kinase activity  (ISO)
positive regulation of T cell proliferation  (IMP)
positive regulation of vasculogenesis  (IMP)
regulation of blood vessel remodeling  (IMP)
regulation of cell growth  (ISO)
regulation of cell migration  (ISO)
regulation of endothelial cell differentiation  (IDA)
regulation of endothelial cell migration  (IDA)
regulation of epidermal growth factor receptor signaling pathway  (IMP,ISO)
regulation of ERK1 and ERK2 cascade  (ISO)
regulation of homophilic cell adhesion  (ISO)
regulation of phosphatidylinositol 3-kinase signaling  (ISO)
regulation of sprouting angiogenesis  (IMP)
signal transduction  (ISO)
viral entry into host cell  (IDA)
viral process  (IEA)
wound healing, spreading of cells  (ISO)

References

Additional References at PubMed
PMID:1279194   PMID:1326665   PMID:1633107   PMID:1648219   PMID:1653760   PMID:1676977   PMID:1719235   PMID:1985902   PMID:2133556   PMID:2164599   PMID:2702644   PMID:6101098  
PMID:6265583   PMID:6327825   PMID:7628460   PMID:8207827   PMID:8209741   PMID:8380065   PMID:8402684   PMID:8482578   PMID:8500759   PMID:8672132   PMID:8812484   PMID:8896983  
PMID:9047385   PMID:9212243   PMID:9343248   PMID:9867848   PMID:10349636   PMID:10491101   PMID:10922068   PMID:10964771   PMID:11042159   PMID:11076861   PMID:11133662   PMID:11284729  
PMID:11483763   PMID:11694516   PMID:11801635   PMID:11850617   PMID:12477932   PMID:12832451   PMID:14517298   PMID:14527684   PMID:14970176   PMID:15207636   PMID:15220458   PMID:15282163  
PMID:15316023   PMID:15331748   PMID:15467833   PMID:16044082   PMID:16054098   PMID:16141072   PMID:16141073   PMID:16595723   PMID:16602821   PMID:16619040   PMID:16638824   PMID:16680193  
PMID:16944957   PMID:17081782   PMID:17328885   PMID:17623671   PMID:18003729   PMID:18454175   PMID:18544705   PMID:18794798   PMID:18843289   PMID:18848945   PMID:19008452   PMID:19036974  
PMID:19273835   PMID:19285068   PMID:19358828   PMID:19406938   PMID:19621080   PMID:19700760   PMID:20044046   PMID:20404914   PMID:20410265   PMID:20739537   PMID:21029969   PMID:21081647  
PMID:21267068   PMID:21532628   PMID:21670291   PMID:21760897   PMID:21949477   PMID:22092845   PMID:22143889   PMID:22162753   PMID:22179047   PMID:22406619   PMID:22469976   PMID:22496641  
PMID:22673933   PMID:22962327   PMID:23123061   PMID:23469261   PMID:23613893   PMID:23696226   PMID:23734002   PMID:23780386   PMID:23800882   PMID:23935487   PMID:25363763   PMID:25406283  
PMID:25490771   PMID:25498293   PMID:25692415   PMID:25724769   PMID:25774501   PMID:25826454   PMID:25908210   PMID:25972571   PMID:26196244   PMID:26219866   PMID:26238781   PMID:26284027  
PMID:26374765   PMID:26846848   PMID:26911181   PMID:27002145   PMID:27572314   PMID:27695943   PMID:27777319   PMID:28035001   PMID:28913658   PMID:29377208   PMID:29396368   PMID:29746166  
PMID:29907459   PMID:29967450   PMID:30664851   PMID:30674283   PMID:31083261   PMID:31676858   PMID:32027621   PMID:32150576   PMID:32169849   PMID:32209360   PMID:32521208   PMID:33352461  
PMID:34058224   PMID:34440862  


Genomics

Comparative Map Data
Ceacam1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39725,161,127 - 25,177,072 (-)NCBIGRCm39mm39
GRCm39 Ensembl725,161,132 - 25,177,028 (-)Ensembl
GRCm38725,461,702 - 25,477,647 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl725,461,707 - 25,477,603 (-)EnsemblGRCm38mm10GRCm38
MGSCv37726,246,721 - 26,262,644 (-)NCBIGRCm37mm9NCBIm37
MGSCv36725,170,462 - 25,186,385 (-)NCBImm8
Celera720,077,172 - 20,093,096 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map713.84NCBI
CEACAM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1942,507,304 - 42,561,234 (-)EnsemblGRCh38hg38GRCh38
GRCh381942,507,306 - 42,528,482 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371943,011,458 - 43,032,633 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361947,703,298 - 47,724,479 (-)NCBINCBI36hg18NCBI36
Build 341947,703,298 - 47,724,438NCBI
Celera1939,812,240 - 39,833,442 (-)NCBI
Cytogenetic Map19q13.2NCBI
HuRef1939,441,679 - 39,462,877 (-)NCBIHuRef
CHM1_11943,013,129 - 43,034,353 (-)NCBICHM1_1
Ceacam1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2181,043,595 - 81,060,050 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl181,043,595 - 81,059,992 (-)Ensembl
Rnor_6.0182,327,955 - 82,344,345 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl182,327,955 - 82,344,345 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0183,589,574 - 83,605,846 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4180,742,540 - 80,758,943 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1180,822,590 - 80,837,016NCBI
Celera175,484,279 - 75,500,669 (-)NCBICelera
RH 3.4 Map1826.0RGD
Cytogenetic Map1q21NCBI
Ceacam1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955555426,894 - 446,235 (+)NCBIChiLan1.0ChiLan1.0
CEACAM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11947,987,522 - 48,008,739 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1947,989,430 - 48,008,739 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01939,395,550 - 39,417,063 (-)NCBIMhudiblu_PPA_v0panPan3
CEACAM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11111,902,429 - 111,919,191 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1111,745,413 - 111,917,830 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1111,327,263 - 111,342,206 (+)NCBI
ROS_Cfam_1.01112,464,630 - 112,529,985 (+)NCBI
UMICH_Zoey_3.11112,027,612 - 112,084,452 (+)NCBI
UNSW_CanFamBas_1.01111,661,182 - 111,718,360 (+)NCBI
UU_Cfam_GSD_1.01112,587,794 - 112,644,821 (+)NCBI
LOC101954488
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934915,690,137 - 15,707,040 (+)NCBI
SpeTri2.0NW_00493670637,480 - 53,306 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEACAM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1649,437,308 - 49,460,614 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2645,330,417 - 45,353,721 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEACAM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1636,708,368 - 36,731,729 (-)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607314,956,410 - 14,978,884 (-)NCBIVero_WHO_p1.0

Position Markers
AI267129  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38725,516,455 - 25,516,567UniSTSGRCm38
GRCm38725,462,120 - 25,462,232UniSTSGRCm38
MGSCv37726,247,139 - 26,247,251UniSTSGRCm37
MGSCv37726,301,474 - 26,301,586UniSTSGRCm37
Celera720,077,590 - 20,077,702UniSTS
Celera720,131,149 - 20,131,261UniSTS
Cytogenetic Map7A3UniSTS
cM Map75.5UniSTS
cM Map75.5UniSTS
Whitehead/MRC_RH7369.57UniSTS
D7Dcr2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38725,517,906 - 25,518,003UniSTSGRCm38
MGSCv37726,302,925 - 26,303,022UniSTSGRCm37
Celera720,132,600 - 20,132,699UniSTS
Cytogenetic Map7A3UniSTS
cM Map7 UniSTS
Ceacam1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38725,476,354 - 25,476,599UniSTSGRCm38
MGSCv37726,261,373 - 26,261,618UniSTSGRCm37
Celera720,091,825 - 20,092,070UniSTS
Cytogenetic Map7A3UniSTS
cM Map75.5UniSTS
D7Mit23  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38725,517,826 - 25,518,042UniSTSGRCm38
GRCm38725,463,525 - 25,463,757UniSTSGRCm38
MGSCv37726,302,845 - 26,303,061UniSTSGRCm37
MGSCv37726,248,544 - 26,248,776UniSTSGRCm37
Celera720,132,520 - 20,132,738UniSTS
Celera720,078,995 - 20,079,227UniSTS
Cytogenetic Map7A3UniSTS
cM Map78.0UniSTS
cM Map7 UniSTS
Whitehead Genetic75.5UniSTS
Whitehead_YAC7 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7269777136697919Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7346321287493512Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360000072900000Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76500000133900000Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined71028944244289559Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71060637344606511Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71278145246781452Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71278145246781452Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1333306047333196Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71343577947435779Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71360000047700000Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71690336849509583Mouse
1301041Prnr2_mprion resistance 2 (mouse)Not determined71899486940024609Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718994869119886157Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719413473142366067Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71958059053580679Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined72014282554142942Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72302446357024609Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72323914857239292Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72341710757417107Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2186
Count of miRNA genes:502
Interacting mature miRNAs:563
Transcripts:ENSMUST00000098666, ENSMUST00000098668, ENSMUST00000098669
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001039185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001039186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001039187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_011926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAHY01060000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB236328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB236329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB236330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB236331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB236332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC162443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF287911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC114998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC121189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JC247483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M61907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M77196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M96934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M96935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X15351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X53084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X67278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X67279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X67280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X67281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X67282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X67283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X84054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000098666   ⟹   ENSMUSP00000096263
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,161,132 - 25,177,028 (-)Ensembl
GRCm38.p6 Ensembl725,461,707 - 25,477,603 (-)Ensembl
RefSeq Acc Id: ENSMUST00000098668   ⟹   ENSMUSP00000096265
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,162,754 - 25,176,959 (-)Ensembl
GRCm38.p6 Ensembl725,463,329 - 25,477,534 (-)Ensembl
RefSeq Acc Id: ENSMUST00000098669   ⟹   ENSMUSP00000096266
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,161,938 - 25,176,998 (-)Ensembl
GRCm38.p6 Ensembl725,462,513 - 25,477,573 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205308   ⟹   ENSMUSP00000146156
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,163,118 - 25,176,959 (-)Ensembl
GRCm38.p6 Ensembl725,463,693 - 25,477,534 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206171   ⟹   ENSMUSP00000145584
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,163,885 - 25,176,998 (-)Ensembl
GRCm38.p6 Ensembl725,464,460 - 25,477,573 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206483
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,170,800 - 25,176,129 (-)Ensembl
GRCm38.p6 Ensembl725,471,375 - 25,476,704 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206583   ⟹   ENSMUSP00000145570
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,163,118 - 25,176,959 (-)Ensembl
GRCm38.p6 Ensembl725,463,693 - 25,477,534 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206676   ⟹   ENSMUSP00000145590
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,163,118 - 25,176,959 (-)Ensembl
GRCm38.p6 Ensembl725,463,693 - 25,477,534 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206687   ⟹   ENSMUSP00000146066
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,163,118 - 25,176,959 (-)Ensembl
GRCm38.p6 Ensembl725,463,693 - 25,477,534 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206717
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,162,754 - 25,177,002 (-)Ensembl
GRCm38.p6 Ensembl725,463,329 - 25,477,577 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206981
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl725,170,801 - 25,177,008 (-)Ensembl
GRCm38.p6 Ensembl725,471,376 - 25,477,583 (-)Ensembl
RefSeq Acc Id: NM_001039185   ⟹   NP_001034274
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39725,161,127 - 25,177,050 (-)NCBI
GRCm38725,461,702 - 25,477,625 (-)ENTREZGENE
MGSCv37726,246,721 - 26,262,644 (-)RGD
Celera720,077,172 - 20,093,096 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001039186   ⟹   NP_001034275
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39725,161,127 - 25,177,050 (-)NCBI
GRCm38725,461,702 - 25,477,625 (-)ENTREZGENE
MGSCv37726,246,721 - 26,262,644 (-)RGD
Celera720,077,172 - 20,093,096 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001039187   ⟹   NP_001034276
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39725,161,127 - 25,177,050 (-)NCBI
GRCm38725,461,702 - 25,477,625 (-)ENTREZGENE
MGSCv37726,246,721 - 26,262,644 (-)RGD
Celera720,077,172 - 20,093,096 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_011926   ⟹   NP_036056
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39725,161,127 - 25,177,050 (-)NCBI
GRCm38725,461,702 - 25,477,625 (-)ENTREZGENE
MGSCv37726,246,721 - 26,262,644 (-)RGD
Celera720,077,172 - 20,093,096 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030242604   ⟹   XP_030098464
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39725,163,298 - 25,177,072 (-)NCBI
GRCm38725,463,873 - 25,477,647 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001034276   ⟸   NM_001039187
- Peptide Label: isoform 4 precursor
- UniProtKB: Q3LFS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_036056   ⟸   NM_011926
- Peptide Label: isoform 3 precursor
- UniProtKB: Q3LFS9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001034275   ⟸   NM_001039186
- Peptide Label: isoform 2 precursor
- UniProtKB: P31809 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001034274   ⟸   NM_001039185
- Peptide Label: isoform 1 precursor
- UniProtKB: P31809 (UniProtKB/Swiss-Prot),   Q3LFS9 (UniProtKB/TrEMBL),   Q925P3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030098464   ⟸   XM_030242604
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000145584   ⟸   ENSMUST00000206171
RefSeq Acc Id: ENSMUSP00000146066   ⟸   ENSMUST00000206687
RefSeq Acc Id: ENSMUSP00000145590   ⟸   ENSMUST00000206676
RefSeq Acc Id: ENSMUSP00000145570   ⟸   ENSMUST00000206583
RefSeq Acc Id: ENSMUSP00000146156   ⟸   ENSMUST00000205308
RefSeq Acc Id: ENSMUSP00000096266   ⟸   ENSMUST00000098669
RefSeq Acc Id: ENSMUSP00000096265   ⟸   ENSMUST00000098668
RefSeq Acc Id: ENSMUSP00000096263   ⟸   ENSMUST00000098666
Protein Domains
Ig-like   Ig-like C2-type   Ig-like V-type

Promoters
RGD ID:6892278
Promoter ID:EPDNEW_M9590
Type:initiation region
Name:Ceacam1_1
Description:Mus musculus carcinoembryonic antigen-related cell adhesion molecule1 , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9591  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38725,477,588 - 25,477,648EPDNEW
RGD ID:6840821
Promoter ID:MM_KWN:49455
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Kidney,   Liver
Transcripts:ENSMUST00000098672,   NM_001039185,   NM_001039186,   NM_001039187,   NM_011926,   UC009FSY.1,   UC009FTA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36726,262,276 - 26,262,776 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1347245 AgrOrtholog
Ensembl Genes ENSMUSG00000074272 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000096263 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000096265 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000096266 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000145570 UniProtKB/TrEMBL
  ENSMUSP00000145584 UniProtKB/Swiss-Prot
  ENSMUSP00000145590 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000146066 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000146156 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000098666 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000098668 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000098669 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000205308 UniProtKB/TrEMBL
  ENSMUST00000206171 UniProtKB/Swiss-Prot
  ENSMUST00000206583 UniProtKB/TrEMBL
  ENSMUST00000206676 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000206687 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:26365 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1347245 ENTREZGENE
NCBI Gene 26365 ENTREZGENE
Pfam Ig_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  V-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ceacam1 PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt CEAM1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q03679_MOUSE UniProtKB/TrEMBL
  Q3LFS5_MOUSE UniProtKB/TrEMBL
  Q3LFS6_MOUSE UniProtKB/TrEMBL
  Q3LFS7_MOUSE UniProtKB/TrEMBL
  Q3LFS8 ENTREZGENE, UniProtKB/TrEMBL
  Q3LFS9 ENTREZGENE, UniProtKB/TrEMBL
  Q61351_MOUSE UniProtKB/TrEMBL
  Q61352_MOUSE UniProtKB/TrEMBL
  Q61354_MOUSE UniProtKB/TrEMBL
  Q925P3 ENTREZGENE, UniProtKB/TrEMBL
  Q99232_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q61350 UniProtKB/Swiss-Prot
  Q61353 UniProtKB/Swiss-Prot