Boll (boule homolog, RNA binding protein) - Rat Genome Database

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Gene: Boll (boule homolog, RNA binding protein) Mus musculus
Analyze
Symbol: Boll
Name: boule homolog, RNA binding protein
RGD ID: 1322550
MGI Page MGI
Description: Predicted to enable identical protein binding activity; mRNA 3'-UTR binding activity; and translation activator activity. Predicted to be involved in 3'-UTR-mediated mRNA stabilization and positive regulation of translational initiation. Predicted to act upstream of or within meiotic cell cycle. Predicted to be active in cytoplasm. Is expressed in central nervous system; germ cell of gonad; and sensory organ. Orthologous to human BOLL (boule homolog, RNA binding protein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4930554P13Rik; 4930597B14Rik; bol, boule-like; bol, boule-like (Drosophila); protein boule-like
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39155,282,725 - 55,402,948 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl155,287,817 - 55,402,628 (-)EnsemblGRCm39 Ensembl
GRCm38155,243,566 - 55,363,789 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl155,248,658 - 55,363,469 (-)EnsemblGRCm38mm10GRCm38
MGSCv37155,356,913 - 55,420,313 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36155,290,802 - 55,308,014 (-)NCBIMGSCv36mm8
Celera155,820,206 - 55,883,595 (-)NCBICelera
Cytogenetic Map1C1.2NCBI
cM Map128.08NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11390979   PMID:16033648   PMID:16141072   PMID:16141073   PMID:20335278   PMID:20657660   PMID:21677750   PMID:21873635   PMID:24086306  
PMID:25726377   PMID:27632217   PMID:29941866   PMID:31355046   PMID:33177084   PMID:35965435  


Genomics

Comparative Map Data
Boll
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39155,282,725 - 55,402,948 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl155,287,817 - 55,402,628 (-)EnsemblGRCm39 Ensembl
GRCm38155,243,566 - 55,363,789 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl155,248,658 - 55,363,469 (-)EnsemblGRCm38mm10GRCm38
MGSCv37155,356,913 - 55,420,313 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36155,290,802 - 55,308,014 (-)NCBIMGSCv36mm8
Celera155,820,206 - 55,883,595 (-)NCBICelera
Cytogenetic Map1C1.2NCBI
cM Map128.08NCBI
BOLL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382197,726,890 - 197,786,206 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2197,726,879 - 197,786,762 (-)EnsemblGRCh38hg38GRCh38
GRCh372198,591,614 - 198,650,930 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362198,299,856 - 198,359,183 (-)NCBINCBI36Build 36hg18NCBI36
Build 342198,417,117 - 198,476,444NCBI
Celera2192,347,376 - 192,406,705 (-)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2190,443,790 - 190,503,115 (-)NCBIHuRef
CHM1_12198,597,446 - 198,656,942 (-)NCBICHM1_1
T2T-CHM13v2.02198,210,564 - 198,269,863 (-)NCBIT2T-CHM13v2.0
Boll
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8964,225,411 - 64,354,394 (-)NCBIGRCr8
mRatBN7.2956,734,890 - 56,859,917 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl956,733,584 - 56,859,916 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx965,308,572 - 65,368,623 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0970,424,482 - 70,484,531 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0968,724,992 - 68,786,596 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0961,836,517 - 61,975,640 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl961,882,333 - 61,975,640 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl964,480,031 - 64,573,660 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0964,248,338 - 64,377,262 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4954,105,735 - 54,165,888 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera954,280,021 - 54,339,860 (-)NCBICelera
Cytogenetic Map9q31NCBI
Boll
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554032,920,722 - 2,958,074 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554032,917,694 - 2,963,470 (+)NCBIChiLan1.0ChiLan1.0
BOLL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213100,346,186 - 100,406,876 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B100,361,179 - 100,421,857 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B84,976,389 - 85,036,125 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B202,869,379 - 202,928,563 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B202,869,379 - 202,928,563 (-)Ensemblpanpan1.1panPan2
BOLL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1377,167,993 - 7,216,590 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl377,169,192 - 7,216,590 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha378,102,325 - 8,162,936 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0377,046,607 - 7,107,234 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl377,059,756 - 7,108,682 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1377,045,151 - 7,105,764 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0377,011,947 - 7,072,759 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0377,036,072 - 7,096,714 (-)NCBIUU_Cfam_GSD_1.0
Boll
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303155,294,028 - 155,358,682 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365061,479,317 - 1,529,739 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365061,479,383 - 1,529,739 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BOLL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15101,535,705 - 101,602,232 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115101,535,392 - 101,602,232 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215112,633,040 - 112,667,705 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BOLL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11083,209,516 - 83,270,580 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1083,211,190 - 83,269,659 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040116,179,421 - 116,238,706 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Boll
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248892,580,623 - 2,614,192 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248892,580,541 - 2,619,512 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Boll
4506 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2650
Count of miRNA genes:758
Interacting mature miRNAs:1043
Transcripts:ENSMUST00000087585, ENSMUST00000114423, ENSMUST00000159398, ENSMUST00000159564, ENSMUST00000161472, ENSMUST00000161810, ENSMUST00000173983, ENSMUST00000174065
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357524W6q14_mweight 6 weeks QTL 14 (mouse)Not determined13476013873976915Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301714Vertcling_mvertical clinging (mouse)Not determined14293803176938167Mouse
12910788Pwgrq9_mpost-weaning growth rate QTL 9 (mouse)14086800867270256Mouse
4141305Tgq9_mtriglyceride QTL 9 (mouse)Not determined5142160585421605Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14127539975275399Mouse
1357651Lgq5_mlate growth QTL 5 (mouse)Not determined13476013873976915Mouse
12910786Pwgrq10_mpost-weaning growth rate QTL 10 (mouse)14086800867270256Mouse
1301211Bbaa11_mB.burgdorferi-associated arthritis 11 (mouse)Not determined14888900682889210Mouse
11100001Col4a1m1_mcollagen, type IV, alpha 1 modifier 1 (mouse)12555019162946882Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
1558855Eae30_mexperimental allergic encephalomyelitis susceptibility 30 (mouse)Not determined14541777372975057Mouse
1301954Lrnx11_mlearning-contextual 11 (mouse)Not determined13913280874516365Mouse
1357824Estoq4_membryo survival total QTL 4 (mouse)Not determined13476013873976915Mouse
1357506W10q6_mweight 10 weeks QTL 6 (mouse)Not determined13476013873976915Mouse
4141032Wbcc1_mwhite blood cell count 1 (mouse)Not determined4225966776259667Mouse
39128207Lwq16_mliver weight QTL 16 (mouse)13476013873976915Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
4142307Shali1_msurvival time to hyperoxic acute lung injury 1 (mouse)Not determined5196402570406589Mouse
12880409V125Dq1_mvitamin D active form serum level QTL 1 (mouse)12603916060039160Mouse
4142433Hbnr1_mHeligmosomoides bakeri nematode resistance 1 (mouse)Not determined2555019158273271Mouse
1301616Yaa2_mY-linked autoimmune acceleration 2 (mouse)Not determined14685469080854839Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
10043965Obq24_mobesity QTL 24 (mouse)Not determined15089021684890216Mouse
1301430Cdcs2_mcytokine deficiency colitis susceptibility 2 (mouse)Not determined14889234582892485Mouse
12879917Shm3_msperm head morphology 3 (mouse)14418690462946882Mouse
1357759W3q12_mweight 3 weeks QTL 12 (mouse)Not determined13476013873976915Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1558905Gct7_mgranulosa cell tumorigenesis 7 (mouse)Not determined14734989481350013Mouse
1558822Vas1_mautoimmune vasitis resistance 1 (mouse)Not determined14888900682889210Mouse
1301670Ssta1_msusceptibility to Salmonella typhimurium antigens 1 (mouse)Not determined14594675579946882Mouse
1357475w3q13_mweight 3 weeks QTL 13 (mouse)Not determined12310959173976915Mouse
12910780Pwgrq11_mpost-weaning growth rate QTL 11 (mouse)14086800867270256Mouse
1301225Sle7_msystematic lupus erythematosus susceptibility 7 (mouse)Not determined14685469080854839Mouse
1301166Thypr2_mthymocyte proliferative response 2 (mouse)Not determined14127312475273271Mouse

Markers in Region
Boll  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1C1UniSTS
cM Map1 UniSTS
PMC34683P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38155,304,402 - 55,304,612UniSTSGRCm38
MGSCv37155,361,246 - 55,361,456UniSTSGRCm37
Celera155,824,539 - 55,824,749UniSTS
Cytogenetic Map1C1UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000087585   ⟹   ENSMUSP00000084868
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl155,339,228 - 55,402,478 (-)Ensembl
GRCm38.p6 Ensembl155,300,069 - 55,363,319 (-)Ensembl
Ensembl Acc Id: ENSMUST00000114423   ⟹   ENSMUSP00000110066
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl155,339,228 - 55,401,885 (-)Ensembl
GRCm38.p6 Ensembl155,300,069 - 55,362,726 (-)Ensembl
Ensembl Acc Id: ENSMUST00000159398   ⟹   ENSMUSP00000123814
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl155,385,416 - 55,402,628 (-)Ensembl
GRCm38.p6 Ensembl155,346,257 - 55,363,469 (-)Ensembl
Ensembl Acc Id: ENSMUST00000159564   ⟹   ENSMUSP00000124962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl155,339,228 - 55,402,478 (-)Ensembl
GRCm38.p6 Ensembl155,300,069 - 55,363,319 (-)Ensembl
Ensembl Acc Id: ENSMUST00000161810   ⟹   ENSMUSP00000138084
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl155,287,817 - 55,339,337 (-)Ensembl
GRCm38.p6 Ensembl155,248,658 - 55,300,178 (-)Ensembl
Ensembl Acc Id: ENSMUST00000173983   ⟹   ENSMUSP00000134054
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl155,308,015 - 55,399,900 (-)Ensembl
GRCm38.p6 Ensembl155,268,856 - 55,360,741 (-)Ensembl
Ensembl Acc Id: ENSMUST00000174065
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl155,388,074 - 55,399,900 (-)Ensembl
GRCm38.p6 Ensembl155,348,915 - 55,360,741 (-)Ensembl
RefSeq Acc Id: NM_001113367   ⟹   NP_001106838
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39155,338,894 - 55,401,887 (-)NCBI
GRCm38155,299,735 - 55,362,728 (-)NCBI
MGSCv37155,356,913 - 55,420,313 (-)RGD
Celera155,820,206 - 55,883,595 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001367887   ⟹   NP_001354816
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39155,308,015 - 55,402,912 (-)NCBI
GRCm38155,268,856 - 55,363,753 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001368767   ⟹   NP_001355696
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39155,287,870 - 55,402,912 (-)NCBI
GRCm38155,248,711 - 55,363,753 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001368768   ⟹   NP_001355697
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39155,338,894 - 55,401,887 (-)NCBI
GRCm38155,299,735 - 55,362,728 (-)NCBI
Sequence:
RefSeq Acc Id: NM_029267   ⟹   NP_083543
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39155,338,894 - 55,402,912 (-)NCBI
GRCm38155,299,735 - 55,363,753 (-)NCBI
MGSCv37155,356,913 - 55,420,313 (-)RGD
Celera155,820,206 - 55,883,595 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XR_373267
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39155,282,725 - 55,402,948 (-)NCBI
GRCm38155,243,566 - 55,363,789 (-)NCBI
Sequence:
RefSeq Acc Id: NP_083543   ⟸   NM_029267
- Peptide Label: isoform 1
- UniProtKB: Q9D4V2 (UniProtKB/Swiss-Prot),   Q924M5 (UniProtKB/Swiss-Prot),   E9QPQ9 (UniProtKB/TrEMBL),   G3UYE8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001106838   ⟸   NM_001113367
- Peptide Label: isoform 2
- UniProtKB: E9PWH1 (UniProtKB/TrEMBL),   F7CFY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001355696   ⟸   NM_001368767
- Peptide Label: isoform 4
- UniProtKB: G3UYE8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001354816   ⟸   NM_001367887
- Peptide Label: isoform 3
- UniProtKB: G3UYE8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001355697   ⟸   NM_001368768
- Peptide Label: isoform 2
- UniProtKB: F7CFY0 (UniProtKB/TrEMBL),   E9PWH1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000123814   ⟸   ENSMUST00000159398
Ensembl Acc Id: ENSMUSP00000124962   ⟸   ENSMUST00000159564
Ensembl Acc Id: ENSMUSP00000084868   ⟸   ENSMUST00000087585
Ensembl Acc Id: ENSMUSP00000134054   ⟸   ENSMUST00000173983
Ensembl Acc Id: ENSMUSP00000110066   ⟸   ENSMUST00000114423
Ensembl Acc Id: ENSMUSP00000138084   ⟸   ENSMUST00000161810
Protein Domains
DAZ   RRM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q924M5-F1-model_v2 AlphaFold Q924M5 1-293 view protein structure

Promoters
RGD ID:6873736
Promoter ID:EPDNEW_M319
Type:initiation region
Name:Boll_2
Description:Mus musculus boule homolog, RNA binding protein , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M320  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38155,362,708 - 55,362,768EPDNEW
RGD ID:6873738
Promoter ID:EPDNEW_M320
Type:initiation region
Name:Boll_1
Description:Mus musculus boule homolog, RNA binding protein , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M319  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38155,363,391 - 55,363,451EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1922638 AgrOrtholog
Ensembl Genes ENSMUSG00000025977 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000087585 ENTREZGENE
  ENSMUST00000087585.10 UniProtKB/Swiss-Prot
  ENSMUST00000114423 ENTREZGENE
  ENSMUST00000114423.7 UniProtKB/TrEMBL
  ENSMUST00000159398.2 UniProtKB/Swiss-Prot
  ENSMUST00000159564.9 UniProtKB/TrEMBL
  ENSMUST00000161810.2 UniProtKB/TrEMBL
  ENSMUST00000173983 ENTREZGENE
  ENSMUST00000173983.8 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro DAZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RRM_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:75388 UniProtKB/Swiss-Prot
MGD MGI:1922638 ENTREZGENE
NCBI Gene 75388 ENTREZGENE
PANTHER PROTEIN BOULE-LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11176 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam RRM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Boll PhenoGen
PROSITE DAZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt BOLL_MOUSE UniProtKB/Swiss-Prot
  E9PWH1 ENTREZGENE, UniProtKB/TrEMBL
  E9QPQ9 ENTREZGENE
  F6TV20_MOUSE UniProtKB/TrEMBL
  F7CFY0 ENTREZGENE
  G3UYE8 ENTREZGENE, UniProtKB/TrEMBL
  M0QWZ3_MOUSE UniProtKB/TrEMBL
  Q924M5 ENTREZGENE
  Q9D4V2 ENTREZGENE
UniProt Secondary E9QPQ9 UniProtKB/Swiss-Prot
  F7CFY0 UniProtKB/TrEMBL
  Q9D4V2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-31 Boll  boule homolog, RNA binding protein    bol, boule-like (Drosophila)  Symbol and/or name change 5135510 APPROVED