Hyal1 (hyaluronoglucosaminidase 1) - Rat Genome Database
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Gene: Hyal1 (hyaluronoglucosaminidase 1) Mus musculus
Analyze
Symbol: Hyal1
Name: hyaluronoglucosaminidase 1
RGD ID: 1550529
MGI Page MGI
Description: Predicted to have hyaluronan synthase activity; hyalurononglucosaminidase activity; and transcription factor binding activity. Involved in embryonic skeletal joint morphogenesis and response to virus. Predicted to localize to several cellular components, including extracellular space; hyaluranon cable; and lysosome. Is expressed in liver and metanephros. Used to study mucopolysaccharidosis IX. Human ortholog(s) of this gene implicated in mucopolysaccharidosis and mucopolysaccharidosis IX. Orthologous to human HYAL1 (hyaluronidase 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3,3',5,5'-tetrabromobisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Fus2; Hya1; Hyal; Hyal-1; hyaluronidase 1; hyaluronidase-1; hyaluronoglucosaminidase-1; N-acetyltransferase 6; Nat6
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,454,149 - 107,458,898 (+)NCBIGRCm39mm39
GRCm389107,576,950 - 107,581,699 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,576,927 - 107,581,710 (+)EnsemblGRCm38mm10GRCm38
MGSCv379107,479,283 - 107,482,468 (+)NCBIGRCm37mm9NCBIm37
MGSCv369107,435,053 - 107,438,238 (+)NCBImm8
Celera9107,185,725 - 107,188,909 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map958.17NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:1421769   PMID:1601526   PMID:2022949   PMID:2916164   PMID:8516320   PMID:9503017   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11296287   PMID:11960552   PMID:12477932  
PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073   PMID:18267097   PMID:18344557   PMID:18653706   PMID:18772348   PMID:18799693   PMID:19000842   PMID:21170388   PMID:21677750  
PMID:21732362   PMID:21873635   PMID:22451654   PMID:23007393   PMID:24502338   PMID:24667601   PMID:25468725   PMID:26214381   PMID:26887442   PMID:27246914   PMID:27755597   PMID:29743679  
PMID:30228991  


Genomics

Comparative Map Data
Hyal1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,454,149 - 107,458,898 (+)NCBIGRCm39mm39
GRCm389107,576,950 - 107,581,699 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,576,927 - 107,581,710 (+)EnsemblGRCm38mm10GRCm38
MGSCv379107,479,283 - 107,482,468 (+)NCBIGRCm37mm9NCBIm37
MGSCv369107,435,053 - 107,438,238 (+)NCBImm8
Celera9107,185,725 - 107,188,909 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map958.17NCBI
HYAL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl350,299,890 - 50,312,381 (-)EnsemblGRCh38hg38GRCh38
GRCh38350,299,889 - 50,312,951 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37350,337,320 - 50,349,812 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36350,312,324 - 50,324,816 (-)NCBINCBI36hg18NCBI36
Build 34350,312,324 - 50,316,008NCBI
Celera350,310,151 - 50,322,647 (-)NCBI
Cytogenetic Map3p21.31NCBI
HuRef350,393,063 - 50,405,514 (-)NCBIHuRef
CHM1_1350,289,626 - 50,302,099 (-)NCBICHM1_1
Hyal1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08116,332,834 - 116,337,522 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8116,332,796 - 116,335,435 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08115,689,184 - 115,691,497 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48112,824,562 - 112,826,875 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18112,844,016 - 112,846,330 (+)NCBI
Celera8107,557,375 - 107,559,688 (+)NCBICelera
Cytogenetic Map8q32NCBI
Hyal1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555322,112,771 - 2,115,952 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555322,113,016 - 2,116,093 (-)NCBIChiLan1.0ChiLan1.0
HYAL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1351,463,239 - 51,473,030 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl351,463,239 - 51,467,286 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0350,228,491 - 50,238,798 (-)NCBIMhudiblu_PPA_v0panPan3
HYAL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2039,038,514 - 39,040,368 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12039,035,924 - 39,040,443 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Hyal1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365291,838,212 - 1,842,399 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HYAL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1332,793,569 - 32,800,796 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11332,798,135 - 32,800,705 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21335,976,670 - 35,979,238 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap13q21NCBI
HYAL1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12211,689,123 - 11,693,144 (-)NCBI
ChlSab1.1 Ensembl2211,688,970 - 11,693,183 (-)Ensembl
Hyal1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247304,161,204 - 4,165,554 (-)NCBI

Position Markers
RH136004  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,580,692 - 107,580,886UniSTSGRCm38
MGSCv379107,483,023 - 107,483,217UniSTSGRCm37
Celera9107,189,464 - 107,189,658UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map9F1-F2UniSTS
cM Map960.15UniSTS
AF011567  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,579,432 - 107,579,565UniSTSGRCm38
MGSCv379107,481,763 - 107,481,896UniSTSGRCm37
Celera9107,188,201 - 107,188,334UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map9F1-F2UniSTS
cM Map960.15UniSTS
Whitehead/MRC_RH91108.16UniSTS
Hyal1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,578,418 - 107,578,898UniSTSGRCm38
MGSCv379107,480,749 - 107,481,229UniSTSGRCm37
Celera9107,187,191 - 107,187,667UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map9F1-F2UniSTS
cM Map960.1UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959990000109260000Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975775364114474379Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982910333116910428Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994981301112872929Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978640645112640755Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982910333116910428Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989977005118938021Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979397810113397888Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982910333116910428Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975775364114474379Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981798268115798392Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976535936110536130Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974368177108368325Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984528818118528921Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985897510108641186Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1479
Count of miRNA genes:582
Interacting mature miRNAs:728
Transcripts:ENSMUST00000010195, ENSMUST00000112387, ENSMUST00000123005, ENSMUST00000144392, ENSMUST00000184695
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001331161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF011567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF069741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF338323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF417492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF417493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF417494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF417495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF417496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF417497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF417498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF422176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000010195   ⟹   ENSMUSP00000010195
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,576,958 - 107,580,978 (+)Ensembl
RefSeq Acc Id: ENSMUST00000112387   ⟹   ENSMUSP00000108006
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,576,927 - 107,581,710 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123005   ⟹   ENSMUSP00000122601
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,576,938 - 107,579,562 (+)Ensembl
RefSeq Acc Id: ENSMUST00000144392   ⟹   ENSMUSP00000120599
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,576,990 - 107,579,418 (+)Ensembl
RefSeq Acc Id: ENSMUST00000184695
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9107,579,597 - 107,581,674 (+)Ensembl
RefSeq Acc Id: NM_001331161   ⟹   NP_001318090
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,454,149 - 107,458,898 (+)NCBI
GRCm389107,576,950 - 107,581,699 (+)NCBI
Sequence:
RefSeq Acc Id: NM_008317   ⟹   NP_032343
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,454,149 - 107,458,150 (+)NCBI
GRCm389107,576,950 - 107,580,951 (+)NCBI
MGSCv379107,479,283 - 107,482,468 (+)RGD
Celera9107,185,725 - 107,188,909 (+)RGD
cM Map9 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_032343   ⟸   NM_008317
- Peptide Label: isoform 1 precursor
- Sequence:
RefSeq Acc Id: NP_001318090   ⟸   NM_001331161
- Peptide Label: isoform 2 precursor
RefSeq Acc Id: ENSMUSP00000120599   ⟸   ENSMUST00000144392
RefSeq Acc Id: ENSMUSP00000108006   ⟸   ENSMUST00000112387
RefSeq Acc Id: ENSMUSP00000122601   ⟸   ENSMUST00000123005
RefSeq Acc Id: ENSMUSP00000010195   ⟸   ENSMUST00000010195
Protein Domains
EGF-like

Promoters
RGD ID:6844670
Promoter ID:MM_KWN:58725
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000071415,   OTTMUST00000071416,   OTTMUST00000085686,   OTTMUST00000086089
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,479,066 - 107,479,566 (+)MPROMDB
RGD ID:6844680
Promoter ID:MM_KWN:58726
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000040059,   OTTMUST00000071422,   OTTMUST00000072297,   OTTMUST00000085813,   UC009RLX.1,   UC009RLY.1,   UC009RLZ.1,   UC009RMA.1,   UC009RMB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,480,446 - 107,483,162 (+)MPROMDB
RGD ID:6848415
Promoter ID:MM_ACW:51948
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Kidney,   Liver
Transcripts:HYAL1ANDNAT6ANDHYAL3.MSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,484,061 - 107,485,242 (+)MPROMDB
RGD ID:8670804
Promoter ID:EPDNEW_M13432
Type:initiation region
Name:Hyal1_1
Description:Mus musculus hyaluronoglucosaminidase 1 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389107,576,950 - 107,577,010EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96298 AgrOrtholog
Ensembl Genes ENSMUSG00000010051 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000010195 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000108006 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000120599 UniProtKB/TrEMBL
  ENSMUSP00000122601 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000010195 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000112387 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000123005 UniProtKB/TrEMBL
  ENSMUST00000144392 UniProtKB/TrEMBL
Gene3D-CATH 3.20.20.70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Aldolase_TIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glycoside_hydrolase_SF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hyaluronidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15586 UniProtKB/Swiss-Prot
MGD MGI:96298 ENTREZGENE
NCBI Gene 15586 ENTREZGENE
PANTHER PTHR11769 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glyco_hydro_56 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hyal1 PhenoGen
PIRSF Hyaluronidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS GLHYDRLASE56 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE EGF_1 UniProtKB/Swiss-Prot
  EGF_2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF51445 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YXU8_MOUSE UniProtKB/TrEMBL
  D6RFV7_MOUSE UniProtKB/TrEMBL
  HYAL1_MOUSE UniProtKB/Swiss-Prot
  Q8QZY8_MOUSE UniProtKB/TrEMBL
  Q8R4P7_MOUSE UniProtKB/TrEMBL
  Q8R4P8_MOUSE UniProtKB/TrEMBL
  Q91ZJ9 ENTREZGENE
UniProt Secondary B1AV90 UniProtKB/Swiss-Prot
  O70229 UniProtKB/Swiss-Prot
  Q8CE62 UniProtKB/Swiss-Prot
  Q8QZX3 UniProtKB/Swiss-Prot
  Q8VBW7 UniProtKB/Swiss-Prot
  Q8VDK0 UniProtKB/Swiss-Prot