Aup1 (ancient ubiquitous protein 1)

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Gene: Aup1 (ancient ubiquitous protein 1) Mus musculus

Analyze

Symbol:

Aup1

Name:

ancient ubiquitous protein 1

RGD ID:

1320623

MGI Page

MGI

Description:

Predicted to have enzyme binding activity; ubiquitin binding activity; and ubiquitin-protein transferase activator activity. Predicted to be involved in several processes, including ERAD pathway; lipid droplet formation; and lipophagy. Predicted to localize to autophagosome; endoplasmic reticulum membrane; and lipid droplet. Is expressed in several structures, including central nervous system and retina. Orthologous to human AUP1 (AUP1 lipid droplet regulating VLDL assembly factor).

Type:

protein-coding

RefSeq Status:

REVIEWED

Also known as:

AA589454; lipid droplet-regulating VLDL assembly factor AUP1

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	83,031,483 - 83,034,663 (+)	NCBI	GRCm39		mm39
GRCm38	6	83,054,495 - 83,057,682 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	83,054,521 - 83,057,808 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	83,004,647 - 83,007,676 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	6	83,020,386 - 83,023,340 (+)	NCBI			mm8
Celera	6	85,037,242 - 85,040,271 (+)	NCBI		Celera
Cytogenetic Map	6	C3	NCBI
cM Map	6	35.94	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Parkinson's Disease 13 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,4-methylenedioxymethamphetamine (EXP)

beta-naphthoflavone (EXP)

bisphenol A (ISO)

carbon nanotube (EXP)

clofibrate (EXP)

cyclosporin A (ISO)

diazinon (ISO)

dibutyl phthalate (ISO)

disodium selenite (ISO)

ethanol (EXP)

finasteride (ISO)

flutamide (ISO)

folic acid (EXP)

leflunomide (ISO)

nefazodone (ISO)

nimesulide (ISO)

sodium fluoride (EXP)

sunitinib (ISO)

T-2 toxin (ISO)

valdecoxib (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ER-associated misfolded protein catabolic process (ISO)

lipid droplet formation (ISO)

lipid droplet organization (ISO)

lipophagy (ISO)

protein localization to lipid droplet (ISO)

response to virus (ISO)

retrograde protein transport, ER to cytosol (ISO)

ubiquitin-dependent ERAD pathway (IBA,ISO)

Cellular Component

autophagosome (ISO)

endoplasmic reticulum (ISO)

Hrd1p ubiquitin ligase ERAD-L complex (IBA)

integral component of endoplasmic reticulum membrane (IBA,ISO)

lipid droplet (ISO)

membrane (IBA)

Molecular Function

protein binding (ISO)

ubiquitin binding (IBA)

ubiquitin conjugating enzyme binding (ISO)

ubiquitin protein ligase binding (ISO)

ubiquitin-protein transferase activator activity (IBA)

References

References - curated


1.	MGD data from the GO Consortium
2.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8812468	PMID:8889548	PMID:9806835	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11353393	PMID:12477932	PMID:15489334	PMID:15782199
PMID:16141072	PMID:16141073	PMID:16602821	PMID:18799693	PMID:21267068	PMID:21857022	PMID:21873635	PMID:23223569	PMID:24039768	PMID:28378742	PMID:31138677

Genomics

Comparative Map Data

Aup1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	83,031,483 - 83,034,663 (+)	NCBI	GRCm39		mm39
GRCm38	6	83,054,495 - 83,057,682 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	83,054,521 - 83,057,808 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	83,004,647 - 83,007,676 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	6	83,020,386 - 83,023,340 (+)	NCBI			mm8
Celera	6	85,037,242 - 85,040,271 (+)	NCBI		Celera
Cytogenetic Map	6	C3	NCBI
cM Map	6	35.94	NCBI

AUP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	2	74,526,645 - 74,529,760 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	2	74,526,652 - 74,529,706 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	2	74,753,779 - 74,756,833 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	2	74,753,775 - 74,757,019 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	74,607,283 - 74,610,482 (-)	NCBI	NCBI36		hg18	NCBI36
Celera	2	74,584,883 - 74,588,082 (-)	NCBI
Cytogenetic Map	2	p13.1	NCBI
HuRef	2	74,490,036 - 74,493,235 (-)	NCBI		HuRef
CHM1_1	2	74,683,171 - 74,686,420 (-)	NCBI		CHM1_1

Aup1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	115,560,274 - 115,563,346 (+)	NCBI
Rnor_6.0 Ensembl	4	113,887,115 - 113,890,101 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	4	113,887,030 - 113,890,103 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	4	178,572,215 - 178,575,203 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	117,265,650 - 117,268,638 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	4	104,555,036 - 104,558,024 (+)	NCBI		Celera
Cytogenetic Map	4	q34	NCBI

Aup1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955424	11,259,432 - 11,262,269 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955424	11,259,288 - 11,262,413 (+)	NCBI	ChiLan1.0	ChiLan1.0

AUP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	2A	76,099,483 - 76,102,774 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	76,099,634 - 76,102,464 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	2A	74,593,260 - 74,596,372 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

AUP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	17	48,613,725 - 48,616,728 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	17	48,613,648 - 48,617,091 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Aup1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936556	738,946 - 742,049 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AUP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	68,519,969 - 68,523,076 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	68,520,048 - 68,523,076 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	71,690,861 - 71,850,888 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AUP1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	32,748,737 - 32,751,924 (+)	NCBI
ChlSab1.1 Ensembl	14	32,748,909 - 32,751,776 (+)	Ensembl

Aup1
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624749	28,983,753 - 28,986,785 (+)	NCBI

Position Markers

RH124966

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	83,055,994 - 83,056,077	UniSTS	GRCm38
MGSCv37	6	83,005,988 - 83,006,071	UniSTS	GRCm37
Celera	6	85,038,583 - 85,038,666	UniSTS
Cytogenetic Map	6	D1	UniSTS
Cytogenetic Map	6	C3	UniSTS
cM Map	6	35.0	UniSTS
cM Map	6	34.75	UniSTS
cM Map	6	34.77	UniSTS

D6Umi2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	83,057,469 - 83,057,926	UniSTS	GRCm38
MGSCv37	6	83,007,463 - 83,007,920	UniSTS	GRCm37
Celera	6	85,040,058 - 85,040,515	UniSTS
Cytogenetic Map	6	D1	UniSTS
Cytogenetic Map	6	C3	UniSTS
cM Map	6	34.79	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
25440480	Moaq2_m	modifier of alien QTL 2 (mouse)					6	1	117500000	Mouse
26884414	Bzwq12_m	bi-zygomatic width QTL 12, 16 week (mouse)					6	3400000	139100000	Mouse
1300556	Cia6_m	collagen induced arthritis QTL 6 (mouse)			Not determined		6	4464884	87426034	Mouse
4142126	W3q3_m	weight 3 weeks QTL 3 (mouse)			Not determined			4503823	96656149	Mouse
4142361	W10q11_m	weight 10 weeks QTL 11 (mouse)			Not determined			4503823	96656149	Mouse
4142271	Egq8_m	early growth QTL 8 (mouse)			Not determined			4503823	96656149	Mouse
4142232	W6q4_m	weight 6 weeks QTL 4 (mouse)			Not determined			4503823	96656149	Mouse
1558984	Cplaq9_m	circadian period of locomotor activity 9 (mouse)			Not determined		6	38669625	92607450	Mouse
1300618	Pgia19_m	proteoglycan induced arthritis 19 (mouse)			Not determined		6	45314059	87426034	Mouse
10412157	Fl1n_m	fatty liver 1 in NSY (mouse)			Not determined		6	45314059	128835032	Mouse
4142259	Tabw2_m	tally ho associated body weight 2 (mouse)			Not determined			46935985	136423692	Mouse
25314319	Histh6_m	histamine hypersensitivity 6 (mouse)					6	48720000	125360000	Mouse
25314320	Histh5_m	histamine hypersensitivity 5 (mouse)					6	48720000	148450000	Mouse
1301962	Eila2_m	ethanol induced locomotor activity 2 (mouse)			Not determined		6	48726556	125356785	Mouse
1301254	Skts11_m	skin tumor susceptibility 11 (mouse)			Not determined		6	51179150	85179300	Mouse
1357683	Igf1sl1_m	IGF-1 serum levels 1 (mouse)			Not determined		6	52161713	116155267	Mouse
4141028	Mclr_m	methylcholanthrene lymphoma resistance (mouse)			Not determined			54373427	88379171	Mouse
15039373	Adip28_m	adiposity 28 (mouse)					6	56308211	90308211	Mouse
15039375	Bw41_m	body weight QTL 41 (mouse)					6	56308211	90308211	Mouse
1558977	Skmw10_m	skeletal muscle weight 10 (mouse)			Not determined		6	58447583	92447710	Mouse
10043972	Obq28_m	obesity QTL 28 (mouse)			Not determined		6	58540433	92540433	Mouse
1301740	Bwq2_m	body weight QTL 2 (mouse)			Not determined		6	60057680	94057799	Mouse
1301369	Im4_m	immunoregulatory 4 (mouse)			Not determined		6	63484738	97484905	Mouse
1300650	Bw18_m	body weight QTL 18 (mouse)			Not determined		6	66713869	100714031	Mouse
1301876	Bits2_m	bitterness sensitivity 2 (mouse)			Not determined		6	70425898	104426034	Mouse
1301813	Skl3_m	skeletal size (tail length) 3 (mouse)			Not determined		6	70425898	104426034	Mouse
1301034	Egrm2_m	early growth rate (mouse)			Not determined		6	70425898	104426034	Mouse
4141990	Etax6_m	ethanol induced ataxia 6 (mouse)			Not determined			71322621	86275719	Mouse
1302020	Bbaa20_m	B.burgdorferi-associated arthritis 20 (mouse)			Not determined		6	71322621	93464093	Mouse
1300869	Stheal5_m	soft tissue heal 5 (mouse)			Not determined		6	71575060	105575178	Mouse
1300954	Fcsa1_m	femoral cross-sectional area 1 (mouse)			Not determined		6	71981024	105981170	Mouse
1301521	Pas1c_m	pulmonary adenoma susceptibility 1c (mouse)			Not determined		6	71981024	105981170	Mouse
13506930	Recrq9_m	recombination rate in male meiosis QTL 9 (mouse)					6	73500000	134700000	Mouse
1301320	Ots1_m	ovarian teratoma susceptibility 1 (mouse)			Not determined		6	75447583	104503555	Mouse
1301571	Arrd1_m	age-related retinal degeneration 1 (mouse)			Not determined		6	75544356	92607450	Mouse
1300674	Nidd3n_m	non-insulin-dependent diabetes mellitus 3 in NSY (mouse)			Not determined		6	75544356	94225955	Mouse
10412195	Efw_m	epididymal fat weight (mouse)			Not determined		6	75544356	94225955	Mouse
10043901	Pfat5_m	predicted fat percentage 5 (mouse)			Not determined		6	75607306	109607450	Mouse
10412208	Cypr4_m	cytokine production 4 (mouse)			Not determined		6	75716503	109716697	Mouse
1357875	Pfat2_m	predicted fat percentage 2 (mouse)			Not determined		6	76463949	110464093	Mouse
14697704	Stsl4_m	Salmonella typhimurium susceptibility locus 4 (mouse)					6	77100000	90000000	Mouse
13824985	Alh1_m	amplitude of lateral head displacement 1 (mouse)					6	78000000	97000000	Mouse
4141376	Dbm1_m	diabetes modifier 1 (mouse)			Not determined		6	78629504	121115387	Mouse
14696731	Pairq1_m	P. aeruginosa infection resistance QTL 1 (mouse)					6	81500000	102200000	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	256
Count of miRNA genes:	224
Interacting mature miRNAs:	242
Transcripts:	ENSMUST00000092618
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001301649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_007517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_125891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_377415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_377416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC104324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC134899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK144497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK154707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK158035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171202	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK178251	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK180069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK187544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK188454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK194399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK195286	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK208846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK209976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC012699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC016485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM900175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY234324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U41736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000092618 ⟹ ENSMUSP00000090281

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,521 - 83,057,808 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000203123

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,056,848 - 83,057,393 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000203180

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,755 - 83,056,288 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000203331

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,056,410 - 83,057,644 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000203749

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,056,853 - 83,057,682 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000203915 ⟹ ENSMUSP00000145020

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,731 - 83,057,678 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204209

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,055,391 - 83,056,117 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204343 ⟹ ENSMUSP00000145335

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,748 - 83,057,682 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204383

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,731 - 83,055,169 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204385

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,729 - 83,056,355 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204510

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,056,512 - 83,056,837 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204719 ⟹ ENSMUSP00000145409

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,736 - 83,056,434 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204752

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,057,221 - 83,057,676 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204761

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,738 - 83,055,515 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000204895

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,646 - 83,057,686 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000205042

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,055,714 - 83,056,313 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000205152

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	83,054,714 - 83,056,385 (+)	Ensembl

RefSeq Acc Id:

NM_001301649 ⟹ NP_001288578

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	83,031,502 - 83,034,663 (+)	NCBI
GRCm38	6	83,054,521 - 83,057,682 (+)	NCBI
Celera	6	85,037,110 - 85,040,271 (+)	NCBI

Sequence:

show sequence

GTTCAGCGCATGCCGGGAAACGTAGTCCCGTCAGGACGCGCTCCTCTCCAGCATACGCACACGC
TCACACACAAACACACACACATACACACACATTCCCCGGGGCCGCGAGGCATGCTGGGAACGCT
AGCCCTTCCGGGGCGCCTCCGGGCCTCAGGTTCTGGCGTCTCGGCGGATGCCCAAAGACTCCGC
CTTCCCAGGGGCCCCCGCGGCCCTGCGAAGATGGCGGCGACAGCGGCCCCGCTCTCCTGAAGCG
GCTGCGATGGAACCTCCCCCAGCTCCGGGGCCGGAGCGGCTCTTTGACTCGCACCGGCTCCCGA
GTGACGGCTTCCTGCTGCTCGCGCTACTGCTCTACGCGCCGGTCGGCCTCTGCCTCCTGGTCCT
GCGACTCTTCCTCGGGCTCCACGTCTTCCTGGTCAGCTGCGCTCTGCCCGACAGCGTCCTCCGC
AGCCTCTACTCAATAGTCCCCCCAGCTTTGTGTGTTGGTCTCGGGGCTTCATGGAGATGGATAG
GCGGGTGGAGTTGGTGGAGTCACTCAAGAAATTCTGTGCTTCCACGAGGCTTCCGCCCACACCT
TTGCTGCTCTTCCCCGAGGAAGAGGCCACCAATGGCCGAGAAGGGCTGCTGCGTTTCAGTTCGT
GGCCATTTTCTATTCAGGACGTGGTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTGGTCTC
TGTGACGGTGTCAGATGCCTCCTGGGTCTCAGAACTGCTGTGGTCCCTTTTTGTTCCTTTCACG
GTGTATCAAGTAAGGTGGCTTCATCCCATTCGTCGACAGCTAGGGGAAGAGAGTGAGGAGTTTG
CGCTCCGTGTACAACAGCTGGTGGCCAAAGAATTGGGCCAGATAGGGACACGGCTCACTCCAGC
AGACAAAGCAGAACACATGAAGCGACAAAGACACCCCAGATTACGCCCCCAGTCAGTGCAGTCT
TCTTTTCCTTCTCCTCCCAGCCCTTCTTCTGATGTGCAGCTGACCACTCTCGCTCACAGAGTCA
AGGAGGTTCTGCCCCATGTGCCATTGAATGTCATCCAGAGAGACCTGGCCAGGACTGGGTGTGT
AGACTTGACCATCACAAACCTGCTCGAGGGGGCTGTGGCTTTCATGCCTGAAGATGTCACTGAG
GGATCTCAGTCCCCGCCTGCACCCTCTGCCCCAAAGTTCCCCAGCTCGGGCCTGGCGACCCCTC
AGCCCACAGCCCTAACGTTTGCCAAGTCTTCCTGGGCCCGTCAGGAGAGCCTGCAGGAGCGCAA
GCAGGCACTGTATGAATATGCAAGAAGGAGATTCAGAGAGAGACAGGCCCAGGAGGCTGAATGA
GCCCAAAGGAACAGGATGGTACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAGC
TAACAACAGGCCGGATGAGTGGGTGGTAAAAAGGGAGGGATGGGGCTCCCCCAATCTCACATTA
AATTCAGGGTTTTCACTCAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_007517 ⟹ NP_031543

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	83,031,502 - 83,034,663 (+)	NCBI
GRCm38	6	83,054,521 - 83,057,682 (+)	NCBI
MGSCv37	6	83,004,647 - 83,007,676 (+)	RGD
Celera	6	85,037,110 - 85,040,271 (+)	NCBI
cM Map	6		ENTREZGENE

Sequence:

show sequence

GTTCAGCGCATGCCGGGAAACGTAGTCCCGTCAGGACGCGCTCCTCTCCAGCATACGCACACGC
TCACACACAAACACACACACATACACACACATTCCCCGGGGCCGCGAGGCATGCTGGGAACGCT
AGCCCTTCCGGGGCGCCTCCGGGCCTCAGGTTCTGGCGTCTCGGCGGATGCCCAAAGACTCCGC
CTTCCCAGGGGCCCCCGCGGCCCTGCGAAGATGGCGGCGACAGCGGCCCCGCTCTCCTGAAGCG
GCTGCGATGGAACCTCCCCCAGCTCCGGGGCCGGAGCGGCTCTTTGACTCGCACCGGCTCCCGA
GTGACGGCTTCCTGCTGCTCGCGCTACTGCTCTACGCGCCGGTCGGCCTCTGCCTCCTGGTCCT
GCGACTCTTCCTCGGGCTCCACGTCTTCCTGGTCAGCTGCGCTCTGCCCGACAGCGTCCTCCGC
AGGTTCGTGGTACGAACCATGTGTGCGGTCCTGGGGCTCGTGGCCCGGCAGGAGGACTCCGGAC
TCCGCGATCACCGCGTCAGGGTCCTTATTTCCAACCACGTAACACCTTTTGACCACAACATAGT
CAACCTCCTCACCACCTGTAGCACCCCTCTACTCAATAGTCCCCCCAGCTTTGTGTGTTGGTCT
CGGGGCTTCATGGAGATGGATAGGCGGGTGGAGTTGGTGGAGTCACTCAAGAAATTCTGTGCTT
CCACGAGGCTTCCGCCCACACCTTTGCTGCTCTTCCCCGAGGAAGAGGCCACCAATGGCCGAGA
AGGGCTGCTGCGTTTCAGTTCGTGGCCATTTTCTATTCAGGACGTGGTACAACCTCTTACCCTG
CAAGTTCAGAGACCCCTGGTCTCTGTGACGGTGTCAGATGCCTCCTGGGTCTCAGAACTGCTGT
GGTCCCTTTTTGTTCCTTTCACGGTGTATCAAGTAAGGTGGCTTCATCCCATTCGTCGACAGCT
AGGGGAAGAGAGTGAGGAGTTTGCGCTCCGTGTACAACAGCTGGTGGCCAAAGAATTGGGCCAG
ATAGGGACACGGCTCACTCCAGCAGACAAAGCAGAACACATGAAGCGACAAAGACACCCCAGAT
TACGCCCCCAGTCAGTGCAGTCTTCTTTTCCTTCTCCTCCCAGCCCTTCTTCTGATGTGCAGCT
GACCACTCTCGCTCACAGAGTCAAGGAGGTTCTGCCCCATGTGCCATTGAATGTCATCCAGAGA
GACCTGGCCAGGACTGGGTGTGTAGACTTGACCATCACAAACCTGCTCGAGGGGGCTGTGGCTT
TCATGCCTGAAGATGTCACTGAGGGATCTCAGTCCCCGCCTGCACCCTCTGCCCCAAAGTTCCC
CAGCTCGGGCCTGGCGACCCCTCAGCCCACAGCCCTAACGTTTGCCAAGTCTTCCTGGGCCCGT
CAGGAGAGCCTGCAGGAGCGCAAGCAGGCACTGTATGAATATGCAAGAAGGAGATTCAGAGAGA
GACAGGCCCAGGAGGCTGAATGAGCCCAAAGGAACAGGATGGTACCCAGAGCCGCAGGACGGAG
ACTGGGGGCAGCCCTCACCCAGCTAACAACAGGCCGGATGAGTGGGTGGTAAAAAGGGAGGGAT
GGGGCTCCCCCAATCTCACATTAAATTCAGGGTTTTCACTCAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NR_125891

RefSeq Status:

REVIEWED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	83,031,502 - 83,034,663 (+)	NCBI
GRCm38	6	83,054,521 - 83,057,682 (+)	NCBI
Celera	6	85,037,110 - 85,040,271 (+)	NCBI

Sequence:

show sequence

GTTCAGCGCATGCCGGGAAACGTAGTCCCGTCAGGACGCGCTCCTCTCCAGCATACGCACACGC
TCACACACAAACACACACACATACACACACATTCCCCGGGGCCGCGAGGCATGCTGGGAACGCT
AGCCCTTCCGGGGCGCCTCCGGGCCTCAGGTTCTGGCGTCTCGGCGGATGCCCAAAGACTCCGC
CTTCCCAGGGGCCCCCGCGGCCCTGCGAAGATGGCGGCGACAGCGGCCCCGCTCTCCTGAAGCG
GCTGCGATGGAACCTCCCCCAGCTCCGGGGCCGGAGCGGCTCTTTGACTCGCACCGGCTCCCGA
GTGACGGCTTCCTGCTGCTCGCGCTACTGCTCTACGCGCCGGTCGGCCTCTGCCTCCTGGTCCT
GCGACTCTTCCTCGGGCTCCACGTCTTCCTGGTCAGCTGCGCTCTGCCCGACAGCGTCCTCCGC
AGGTTCGTGGTACGAACCATGTGTGCGGTCCTGGGGCTCGTGGCCCGGCAGGAGGACTCCGGAC
TCCGCGATCACCGCGTCAGGGTCCTTATTTCCAACCACGTAACACCTTTTGACCACAACATAGT
CAACCTCCTCACCACCTGTAGCACCCCTCTACTCAATAGTCCCCCCAGCTTTGTGTGTTGGTCT
CGGGGCTTCATGGAGATGGATAGGCGGGTGGAGTTGGTGGAGTCACTCAAGAAATTCTGTGCTT
CCACGAGGCTTCCGCCCACACCTTTGCTGCTCTTCCCCGAGGAAGAGGCCACCAATGGCCGAGA
AGGGCTGCTGCGTTTCAGTTCGTGGCCATTTTCTATTCAGGACGTGGTACAACCTCTTACCCTG
CAAGTTCAGAGACCCCTGGTCTCTGTGACGGTGTCAGATGCCTCCTGGGTCTCAGAACTGCTGT
GGTCCCTTTTTGTTCCTTTCACGGTGTATCAAGTAAGGTGGCTTCATCCCATTCGTCGACAGCT
AGGGGAAGAGAGTGAGGAGTTTGCGCTCCGTGTACAACAGCTGGTGGCCAAAGAATTGGGCCAG
ATAGGGACACGGCTCACTCCAGCAGACAAAGCAGAACACATGAAGCGACAAAGACACCCCAGAT
TACGCCCCCAGTCAGTGCAGTCTTCTTTTCCTTCTCCTCCCAGCCCTTCTTCTGATGTGCAGCT
GACCACTCTCGCTCACAGAGTCAAGGAGGTTCTGCCCCATGTGCCATTGAATGTCATCCAGAGA
GACCTGGCCAGGACTGGGTGTGTAGACTTGACCATCACAAACCTGCTCGAGGGGGCTGTGGCTT
TCATGCCTGAAGATGTCACTGAGGGATCTCAGTCCCCGCCTGCACCCTCTGCCCCAAAGGCATT
CGATGGGTGTATAATGATGATGACTTCGCAAGCCCTCTGACATTGTGATCACCTCAGTTCCCCA
GCTCGGGCCTGGCGACCCCTCAGCCCACAGCCCTAACGTTTGCCAAGTCTTCCTGGGCCCGTCA
GGAGAGCCTGCAGGAGCGCAAGCAGGCACTGTATGAATATGCAAGAAGGAGATTCAGAGAGAGA
CAGGCCCAGGAGGCTGAATGAGCCCAAAGGAACAGGATGGTACCCAGAGCCGCAGGACGGAGAC
TGGGGGCAGCCCTCACCCAGCTAACAACAGGCCGGATGAGTGGGTGGTAAAAAGGGAGGGATGG
GGCTCCCCCAATCTCACATTAAATTCAGGGTTTTCACTCAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XR_377415

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	83,031,483 - 83,034,658 (+)	NCBI
GRCm38	6	83,054,495 - 83,057,682 (+)	NCBI

Sequence:

show sequence

AGGAGAAGCAGGGCACGACGGTAGCTGTTCAGCGCATGCCGGGAAACGTAGTCCCGTCAGGACG
CGCTCCTCTCCAGCATACGCACACGCTCACACACAAACACACACACATACACACACATTCCCCG
GGGCCGCGAGGCATGCTGGGAACGCTAGCCCTTCCGGGGCGCCTCCGGGCCTCAGGTTCTGGCG
TCTCGGCGGATGCCCAAAGACTCCGCCTTCCCAGGGGCCCCCGCGGCCCTGCGAAGATGGCGGC
GACAGCGGCCCCGCTCTCCTGAAGCGGCTGCGATGGAACCTCCCCCAGCTCCGGGGCCGGAGCG
GCTCTTTGACTCGCACCGGCTCCCGAGTGACGGCTTCCTGCTGCTCGCGCTACTGCTCTACGCG
CCGGTCGGCCTCTGCCTCCTGGTCCTGCGACTCTTCCTCGGGCTCCACGTCTTCCTGGTCAGCT
GCGCTCTGCCCGACAGCGTCCTCCGCAGGTTCGTGGTACGAACCATGTGTGCGGTCCTGGGGCT
CGTGGCCCGGCAGGAGGACTCCGGACTCCGCGATCACCGCGTCAGGGTCCTTATTTCCAACCAC
GTAACACCTTTTGACCACAACATAGTCAACCTCCTCACCACCTGTAGCACCCCTCTACTCAATA
GTCCCCCCAGCTTTGTGTGTTGGTCTCGGGGCTTCATGGAGATGGATAGGCGGGTGGAGTTGGT
GGAGTCACTCAAGAAATTCTGTGCTTCCACGAGGCTTCCGCCCACACCTTTGCTGCTCTTCCCC
GAGGAAGAGGCCACCAATGGCCGAGAAGGGCTGCTGCGTTTCAGTTCGTGGCCATTTTCTATTC
AGGACGTGGTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTGGTCTCTGTGACGGTGTCAGA
TGCCTCCTGGGTCTCAGAACTGCTGTGGTCCCTTTTTGTTCCTTTCACGGTGTATCAAGTAAGG
TGGCTTCATCCCATTCGTCGACAGCTAGGGGAAGAGAGTGAGGAGTTTGCGCTCCGTGTACAAC
AGCTGGTGGCCAAAGAATTGGGCCAGATAGGGACACGGCTCACTCCAGCAGACAAAGCAGAACA
CATGAAGCGACAAAGACACCCCAGATTACGCCCCCAGTCAGCCCTTCTTCTGATGTGCAGCTGA
CCACTCTCGCTCACAGAGTCAAGGAGGTTCTGCCCCATGTGCCATTGAATGTCATCCAGAGAGA
CCTGGCCAGGACTGGGTGTGTAGACTTGACCATCACAAACCTGCTCGAGGGGGCTGTGGCTTTC
ATGCCTGAAGATGTCACTGAGGGATCTCAGTCCCCGCCTGCACCCTCTGCCCCAAAGTTCCCCA
GCTCGGGCCTGGCGACCCCTCAGCCCACAGCCCTAACGTTTGCCAAGTCTTCCTGGGCCCGTCA
GGAGAGCCTGCAGGAGCGCAAGCAGGCACTGTATGAATATGCAAGAAGGAGATTCAGAGAGAGA
CAGGCCCAGGAGGCTGAATGAGCCCAAAGGAACAGGATGGTACCCAGAGCCGCAGGACGGAGAC
TGGGGGCAGCCCTCACCCAGCTAACAACAGGCCGGATGAGTGGGTGGTAAAAAGGGAGGGATGG
GGCTCCCCCAATCTCACATTAAATTCAGGGTTTTCACTCAA

hide sequence

RefSeq Acc Id:

XR_377416

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	83,031,483 - 83,034,663 (+)	NCBI
GRCm38	6	83,054,495 - 83,057,682 (+)	NCBI

Sequence:

show sequence

AGGAGAAGCAGGGCACGACGGTAGCTGTTCAGCGCATGCCGGGAAACGTAGTCCCGTCAGGACG
CGCTCCTCTCCAGCATACGCACACGCTCACACACAAACACACACACATACACACACATTCCCCG
GGGCCGCGAGGCATGCTGGGAACGCTAGCCCTTCCGGGGCGCCTCCGGGCCTCAGGTTCTGGCG
TCTCGGCGGATGCCCAAAGACTCCGCCTTCCCAGGGGCCCCCGCGGCCCTGCGAAGATGGCGGC
GACAGCGGCCCCGCTCTCCTGAAGCGGCTGCGATGGAACCTCCCCCAGCTCCGGGGCCGGAGCG
GCTCTTTGACTCGCACCGGCTCCCGAGTGACGGCTTCCTGCTGCTCGCGCTACTGCTCTACGCG
CCGGTCGGCCTCTGCCTCCTGGTCCTGCGACTCTTCCTCGGGCTCCACGTCTTCCTGGTCAGCT
GCGCTCTGCCCGACAGCGTCCTCCGCAGGTTCGTGGTACGAACCATGTGTGCGGTCCTGGGGCT
CGTGGCCCGGCAGGAGGACTCCGGACTCCGCGATCACCGCGTCAGGGTCCTTATTTCCAACCAC
GTAACACCTTTTGACCACAACATAGTCAACCTCCTCACCACCTGTAGCACCCCTCTACTCAATA
GTCCCCCCAGCTTTGTGTGTTGGTCTCGGGGCTTCATGGAGATGGATAGGCGGGTGGAGTTGGT
GGAGTCACTCAAGAAATTCTGTGCTTCCACGAGGCTTCCGCCCACACCTTTGCTGCTCTTCCCC
GAGGAAGAGGCCACCAATGGCCGAGAAGGGCTGCTGCGTTTCAGTTCGTGGCCATTTTCTATTC
AGGACGTGGTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTGGTCTCTGTGACGGTGTCAGA
TGCCTCCTGGGTCTCAGAACTGCTGTGGTCCCTTTTTGTTCCTTTCACGGTGTATCAAGTAAGG
TGGCTTCATCCCATTCGTCGACAGCTAGGGGAAGAGAGTGAGGAGTTTGCGCTCCGTGTACAAC
AGCTGGTGGCCAAAGAATTGGGCCAGATAGGGACACGGCTCACTCCAGCAGACAAAGCAGAACA
CATGAAGCGACAAAGACACCCCAGATTACGCCCCCAGTCAGCCCTTCTTCTGATGTGCAGCTGA
CCACTCTCGCTCACAGAGTCAAGGAGGTTCTGCCCCATGTGCCATTGAATGTCATCCAGAGAGA
CCTGGCCAGGACTGGGTGTGTAGACTTGACCATCACAAACCTGCTCGAGGGGGCTGTGGCTTTC
ATGCCTGAAGATGTCACTGAGGGATCTCAGTCCCCGCCTGCACCCTCTGCCCCAAAGGCATTCG
ATGGGTGTATAATGATGATGACTTCGCAAGCCCTCTGACATTGTGATCACCTCAGTTCCCCAGC
TCGGGCCTGGCGACCCCTCAGCCCACAGCCCTAACGTTTGCCAAGTCTTCCTGGGCCCGTCAGG
AGAGCCTGCAGGAGCGCAAGCAGGCACTGTATGAATATGCAAGAAGGAGATTCAGAGAGAGACA
GGCCCAGGAGGCTGAATGAGCCCAAAGGAACAGGATGGTACCCAGAGCCGCAGGACGGAGACTG
GGGGCAGCCCTCACCCAGCTAACAACAGGCCGGATGAGTGGGTGGTAAAAAGGGAGGGATGGGG
CTCCCCCAATCTCACATTAAATTCAGGGTTTTCACTCAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001288578	(Get FASTA)	NCBI Sequence Viewer
	NP_031543	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC52839	(Get FASTA)	NCBI Sequence Viewer
	AAH12699	(Get FASTA)	NCBI Sequence Viewer
	AAH16485	(Get FASTA)	NCBI Sequence Viewer
	BAE32776	(Get FASTA)	NCBI Sequence Viewer
	BAE34327	(Get FASTA)	NCBI Sequence Viewer
	BAE42182	(Get FASTA)	NCBI Sequence Viewer
	BAE42515	(Get FASTA)	NCBI Sequence Viewer
	P70295	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_031543 ⟸ NM_007517
- Peptide Label:	isoform 1
- UniProtKB:	Q3TBX5 (UniProtKB/TrEMBL), Q3U3K9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPKDSAFPGAPAALRRWRRQRPRSPEAAAMEPPPAPGPERLFDSHRLPSDGFLLLALLLYAPVG LCLLVLRLFLGLHVFLVSCALPDSVLRRFVVRTMCAVLGLVARQEDSGLRDHRVRVLISNHVTP FDHNIVNLLTTCSTPLLNSPPSFVCWSRGFMEMDRRVELVESLKKFCASTRLPPTPLLLFPEEE ATNGREGLLRFSSWPFSIQDVVQPLTLQVQRPLVSVTVSDASWVSELLWSLFVPFTVYQVRWLH PIRRQLGEESEEFALRVQQLVAKELGQIGTRLTPADKAEHMKRQRHPRLRPQSVQSSFPSPPSP SSDVQLTTLAHRVKEVLPHVPLNVIQRDLARTGCVDLTITNLLEGAVAFMPEDVTEGSQSPPAP SAPKFPSSGLATPQPTALTFAKSSWARQESLQERKQALYEYARRRFRERQAQEAE hide sequence

RefSeq Acc Id:	NP_001288578 ⟸ NM_001301649
- Peptide Label:	isoform 2
- UniProtKB:	I6L970 (UniProtKB/TrEMBL), Q3TBX5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEMDRRVELVESLKKFCASTRLPPTPLLLFPEEEATNGREGLLRFSSWPFSIQDVVQPLTLQVQ RPLVSVTVSDASWVSELLWSLFVPFTVYQVRWLHPIRRQLGEESEEFALRVQQLVAKELGQIGT RLTPADKAEHMKRQRHPRLRPQSVQSSFPSPPSPSSDVQLTTLAHRVKEVLPHVPLNVIQRDLA RTGCVDLTITNLLEGAVAFMPEDVTEGSQSPPAPSAPKFPSSGLATPQPTALTFAKSSWARQES LQERKQALYEYARRRFRERQAQEAE hide sequence

RefSeq Acc Id:

ENSMUSP00000145335 ⟸ ENSMUST00000204343

RefSeq Acc Id:

ENSMUSP00000145020 ⟸ ENSMUST00000203915

RefSeq Acc Id:

ENSMUSP00000090281 ⟸ ENSMUST00000092618

RefSeq Acc Id:

ENSMUSP00000145409 ⟸ ENSMUST00000204719

Protein Domains

CUE

Promoters

RGD ID:

6838972

Promoter ID:

MM_KWN:46563

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Kidney, MEF_B4

Transcripts:

NM_007517, UC009CLZ.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	83,004,481 - 83,004,981 (+)	MPROMDB

RGD ID:

6838973

Promoter ID:

MM_KWN:46564

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour, Brain

Transcripts:

UC009CMA.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	83,006,071 - 83,006,992 (+)	MPROMDB

RGD ID:

6890118

Promoter ID:

EPDNEW_M8509

Type:

multiple initiation site

Name:

Aup1_1

Description:

Mus musculus ancient ubiquitous protein 1 , transcript variant2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	6	83,054,729 - 83,054,789	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:107789	AgrOrtholog
Ensembl Genes	ENSMUSG00000068328	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000090281	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000145020	UniProtKB/TrEMBL
	ENSMUSP00000145335	UniProtKB/TrEMBL
	ENSMUSP00000145409	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000092618	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUST00000203915	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUST00000204343	UniProtKB/TrEMBL
	ENSMUST00000204719	UniProtKB/TrEMBL
InterPro	CUE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:11993	UniProtKB/TrEMBL
MGD	MGI:107789	ENTREZGENE
NCBI Gene	11993	ENTREZGENE
Pfam	CUE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Aup1	PhenoGen
PROSITE	CUE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	CUE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0N4SVA6_MOUSE	UniProtKB/TrEMBL
	A0A0N4SW18_MOUSE	UniProtKB/TrEMBL
	A0A0N4SW79_MOUSE	UniProtKB/TrEMBL
	AUP1_MOUSE	UniProtKB/Swiss-Prot
	I6L970	ENTREZGENE, UniProtKB/TrEMBL
	P70295	ENTREZGENE
	Q3TAZ9_MOUSE	UniProtKB/TrEMBL
	Q3TBX5	ENTREZGENE, UniProtKB/TrEMBL
	Q3U0H4_MOUSE	UniProtKB/TrEMBL
	Q3U3K9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar