Aup1 (ancient ubiquitous protein 1) - Rat Genome Database
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Gene: Aup1 (ancient ubiquitous protein 1) Mus musculus
Analyze
Symbol: Aup1
Name: ancient ubiquitous protein 1
RGD ID: 1320623
MGI Page MGI
Description: Predicted to have enzyme binding activity; ubiquitin binding activity; and ubiquitin-protein transferase activator activity. Predicted to be involved in several processes, including ERAD pathway; lipid droplet formation; and lipophagy. Predicted to localize to autophagosome; endoplasmic reticulum membrane; and lipid droplet. Is expressed in several structures, including central nervous system and retina. Orthologous to human AUP1 (AUP1 lipid droplet regulating VLDL assembly factor).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: AA589454; lipid droplet-regulating VLDL assembly factor AUP1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39683,031,483 - 83,034,663 (+)NCBIGRCm39mm39
GRCm38683,054,495 - 83,057,682 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl683,054,521 - 83,057,808 (+)EnsemblGRCm38mm10GRCm38
MGSCv37683,004,647 - 83,007,676 (+)NCBIGRCm37mm9NCBIm37
MGSCv36683,020,386 - 83,023,340 (+)NCBImm8
Celera685,037,242 - 85,040,271 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.94NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Additional References at PubMed
PMID:8812468   PMID:8889548   PMID:9806835   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11353393   PMID:12477932   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693   PMID:21267068   PMID:21857022   PMID:21873635   PMID:23223569   PMID:24039768   PMID:28378742   PMID:31138677  


Genomics

Comparative Map Data
Aup1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39683,031,483 - 83,034,663 (+)NCBIGRCm39mm39
GRCm38683,054,495 - 83,057,682 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl683,054,521 - 83,057,808 (+)EnsemblGRCm38mm10GRCm38
MGSCv37683,004,647 - 83,007,676 (+)NCBIGRCm37mm9NCBIm37
MGSCv36683,020,386 - 83,023,340 (+)NCBImm8
Celera685,037,242 - 85,040,271 (+)NCBICelera
Cytogenetic Map6C3NCBI
cM Map635.94NCBI
AUP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl274,526,645 - 74,529,760 (-)EnsemblGRCh38hg38GRCh38
GRCh38274,526,652 - 74,529,706 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37274,753,779 - 74,756,833 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh37274,753,775 - 74,757,019 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36274,607,283 - 74,610,482 (-)NCBINCBI36hg18NCBI36
Celera274,584,883 - 74,588,082 (-)NCBI
Cytogenetic Map2p13.1NCBI
HuRef274,490,036 - 74,493,235 (-)NCBIHuRef
CHM1_1274,683,171 - 74,686,420 (-)NCBICHM1_1
Aup1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24115,560,274 - 115,563,346 (+)NCBI
Rnor_6.0 Ensembl4113,887,115 - 113,890,101 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04113,887,030 - 113,890,103 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04178,572,215 - 178,575,203 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44117,265,650 - 117,268,638 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4104,555,036 - 104,558,024 (+)NCBICelera
Cytogenetic Map4q34NCBI
Aup1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542411,259,432 - 11,262,269 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542411,259,288 - 11,262,413 (+)NCBIChiLan1.0ChiLan1.0
AUP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A76,099,483 - 76,102,774 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A76,099,634 - 76,102,464 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A74,593,260 - 74,596,372 (-)NCBIMhudiblu_PPA_v0panPan3
AUP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1748,613,725 - 48,616,728 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11748,613,648 - 48,617,091 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Aup1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936556738,946 - 742,049 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AUP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl368,519,969 - 68,523,076 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1368,520,048 - 68,523,076 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2371,690,861 - 71,850,888 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AUP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11432,748,737 - 32,751,924 (+)NCBI
ChlSab1.1 Ensembl1432,748,909 - 32,751,776 (+)Ensembl
Aup1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474928,983,753 - 28,986,785 (+)NCBI

Position Markers
RH124966  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38683,055,994 - 83,056,077UniSTSGRCm38
MGSCv37683,005,988 - 83,006,071UniSTSGRCm37
Celera685,038,583 - 85,038,666UniSTS
Cytogenetic Map6D1UniSTS
Cytogenetic Map6C3UniSTS
cM Map635.0UniSTS
cM Map634.75UniSTS
cM Map634.77UniSTS
D6Umi2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38683,057,469 - 83,057,926UniSTSGRCm38
MGSCv37683,007,463 - 83,007,920UniSTSGRCm37
Celera685,040,058 - 85,040,515UniSTS
Cytogenetic Map6D1UniSTS
Cytogenetic Map6C3UniSTS
cM Map634.79UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67710000090000000Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:256
Count of miRNA genes:224
Interacting mature miRNAs:242
Transcripts:ENSMUST00000092618
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001301649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_125891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC104324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC134899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM900175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY234324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U41736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000092618   ⟹   ENSMUSP00000090281
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,521 - 83,057,808 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203123
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,056,848 - 83,057,393 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203180
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,755 - 83,056,288 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203331
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,056,410 - 83,057,644 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203749
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,056,853 - 83,057,682 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203915   ⟹   ENSMUSP00000145020
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,731 - 83,057,678 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204209
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,055,391 - 83,056,117 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204343   ⟹   ENSMUSP00000145335
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,748 - 83,057,682 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204383
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,731 - 83,055,169 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204385
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,729 - 83,056,355 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204510
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,056,512 - 83,056,837 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204719   ⟹   ENSMUSP00000145409
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,736 - 83,056,434 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204752
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,057,221 - 83,057,676 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204761
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,738 - 83,055,515 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204895
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,646 - 83,057,686 (+)Ensembl
RefSeq Acc Id: ENSMUST00000205042
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,055,714 - 83,056,313 (+)Ensembl
RefSeq Acc Id: ENSMUST00000205152
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl683,054,714 - 83,056,385 (+)Ensembl
RefSeq Acc Id: NM_001301649   ⟹   NP_001288578
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,031,502 - 83,034,663 (+)NCBI
GRCm38683,054,521 - 83,057,682 (+)NCBI
Celera685,037,110 - 85,040,271 (+)NCBI
Sequence:
RefSeq Acc Id: NM_007517   ⟹   NP_031543
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,031,502 - 83,034,663 (+)NCBI
GRCm38683,054,521 - 83,057,682 (+)NCBI
MGSCv37683,004,647 - 83,007,676 (+)RGD
Celera685,037,110 - 85,040,271 (+)NCBI
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_125891
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,031,502 - 83,034,663 (+)NCBI
GRCm38683,054,521 - 83,057,682 (+)NCBI
Celera685,037,110 - 85,040,271 (+)NCBI
Sequence:
RefSeq Acc Id: XR_377415
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,031,483 - 83,034,658 (+)NCBI
GRCm38683,054,495 - 83,057,682 (+)NCBI
Sequence:
RefSeq Acc Id: XR_377416
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39683,031,483 - 83,034,663 (+)NCBI
GRCm38683,054,495 - 83,057,682 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_031543   ⟸   NM_007517
- Peptide Label: isoform 1
- UniProtKB: Q3TBX5 (UniProtKB/TrEMBL),   Q3U3K9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001288578   ⟸   NM_001301649
- Peptide Label: isoform 2
- UniProtKB: I6L970 (UniProtKB/TrEMBL),   Q3TBX5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000145335   ⟸   ENSMUST00000204343
RefSeq Acc Id: ENSMUSP00000145020   ⟸   ENSMUST00000203915
RefSeq Acc Id: ENSMUSP00000090281   ⟸   ENSMUST00000092618
RefSeq Acc Id: ENSMUSP00000145409   ⟸   ENSMUST00000204719
Protein Domains
CUE

Promoters
RGD ID:6838972
Promoter ID:MM_KWN:46563
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   MEF_B4
Transcripts:NM_007517,   UC009CLZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36683,004,481 - 83,004,981 (+)MPROMDB
RGD ID:6838973
Promoter ID:MM_KWN:46564
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   Brain
Transcripts:UC009CMA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36683,006,071 - 83,006,992 (+)MPROMDB
RGD ID:6890118
Promoter ID:EPDNEW_M8509
Type:multiple initiation site
Name:Aup1_1
Description:Mus musculus ancient ubiquitous protein 1 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38683,054,729 - 83,054,789EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:107789 AgrOrtholog
Ensembl Genes ENSMUSG00000068328 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000090281 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000145020 UniProtKB/TrEMBL
  ENSMUSP00000145335 UniProtKB/TrEMBL
  ENSMUSP00000145409 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000092618 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000203915 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000204343 UniProtKB/TrEMBL
  ENSMUST00000204719 UniProtKB/TrEMBL
InterPro CUE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11993 UniProtKB/TrEMBL
MGD MGI:107789 ENTREZGENE
NCBI Gene 11993 ENTREZGENE
Pfam CUE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Aup1 PhenoGen
PROSITE CUE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CUE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SVA6_MOUSE UniProtKB/TrEMBL
  A0A0N4SW18_MOUSE UniProtKB/TrEMBL
  A0A0N4SW79_MOUSE UniProtKB/TrEMBL
  AUP1_MOUSE UniProtKB/Swiss-Prot
  I6L970 ENTREZGENE, UniProtKB/TrEMBL
  P70295 ENTREZGENE
  Q3TAZ9_MOUSE UniProtKB/TrEMBL
  Q3TBX5 ENTREZGENE, UniProtKB/TrEMBL
  Q3U0H4_MOUSE UniProtKB/TrEMBL
  Q3U3K9 ENTREZGENE, UniProtKB/TrEMBL