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ONTOLOGY REPORT - ANNOTATIONS


Term:polysaccharide catabolic process
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Accession:GO:0000272 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
Synonyms:exact_synonym: polysaccharide breakdown;   polysaccharide catabolism;   polysaccharide degradation
 narrow_synonym: multicellular organismal polysaccharide catabolic process
 alt_id: GO:0044244


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polysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chia chitinase, acidic involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:193,614,374...193,656,532
Ensembl chr 2:193,614,114...193,656,533
JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IDA RGD PMID:17911346 RGD:5129142 NCBI chr 1:255,772,217...255,773,617
Ensembl chr 1:255,771,597...255,807,259
JBrowse link
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IMP
IBA
IDA
PMID:21873635 RGD
GO_Central
PMID:9281456 PMID:21873635 PMID:15180797 PMID:11766064 PMID:6449198 RGD:1598779, RGD:13792537, RGD:1642741, RGD:2304191, RGD:1642743 NCBI chr 2:204,705,053...204,760,966
Ensembl chr 2:204,705,053...204,760,828
JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO MGI:2387343 (MGI:1351534|PMID:10625614) RGD PMID:10625614 MGI:1351534 NCBI chr10:86,307,400...86,318,766 JBrowse link
G Gaa alpha glucosidase acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
IBA
IDA
MGI:2148550|MGI:2179955|MGI:2179960|MGI:2179961 (MGI:2136118|PMID:11328962), (MGI:2157196|PMID:11785984), (MGI:2179452|PMID:10838256)
GO_REF:0000107
(PMID:29061980), (PMID:9505277)
PMID:21873635
RGD
Ensembl
PMID:9505277 PMID:10838256 PMID:11328962 PMID:11785984 PMID:29061980 More... GO_REF:0000107 MGI:2136118 MGI:2157196 MGI:2179452, RGD:1599504, RGD:13792537, RGD:1599506 NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4356541 (MGI:4356361|PMID:19696889)
Ensembl
RGD
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr 7:129,221,679...129,259,192
Ensembl chr 7:129,221,653...129,259,192
JBrowse link
G Pygb glycogen phosphorylase B involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16226229 PMID:21873635 PMID:11071367 PMID:10634496 RGD:1642804, RGD:13792537, RGD:2304126, RGD:1642809 NCBI chr 3:139,611,724...139,658,521
Ensembl chr 3:139,611,749...139,663,553
JBrowse link
G Pygl glycogen phosphorylase L involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15152027 PMID:21873635 PMID:6449198 PMID:114169 RGD:1642805, RGD:13792537, RGD:1642743, RGD:2304128 NCBI chr 6:88,697,598...88,740,260
Ensembl chr 6:88,697,593...88,740,310
JBrowse link
G Pygm glycogen phosphorylase, muscle associated acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
IBA
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:15282316 PMID:17689562 PMID:14674711 PMID:21873635 PMID:6449198 More... GO_REF:0000107 MGI:3052259 MGI:4844074, RGD:1599986, RGD:13792537, RGD:1642743, RGD:1599897, RGD:2304126, RGD:1642811 NCBI chr 1:203,690,550...203,705,369
Ensembl chr 1:203,690,533...203,705,368
JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443
JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4356541 (MGI:4356361|PMID:19696889)
Ensembl
RGD
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr 7:129,221,679...129,259,192
Ensembl chr 7:129,221,653...129,259,192
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:15,470,452...15,473,857
Ensembl chr14:15,469,582...15,477,443
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase involved_in ISO
IBA
(PMID:1883828), (PMID:29343645)
PMID:21873635
RGD PMID:1883828 PMID:29343645 PMID:21873635 RGD:13792537 NCBI chr17:43,808,110...44,049,458
Ensembl chr17:43,809,638...44,049,148
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (MGI:3027459|PMID:14581480) RGD PMID:14581480 MGI:3027459 NCBI chr10:28,255,025...28,373,418
Ensembl chr10:28,255,025...28,312,919
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:381941) RGD PMID:381941 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (MGI:3027459|PMID:14581480) RGD PMID:14581480 MGI:3027459 NCBI chr10:28,255,025...28,373,418
Ensembl chr10:28,255,025...28,312,919
JBrowse link
G Avpr1a arginine vasopressin receptor 1A involved_in NAS PMID:1560825 UniProt PMID:1560825 RGD:1298691 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within ISO MGI:3530901 (MGI:1339514|PMID:10391216) RGD PMID:10391216 MGI:1339514 NCBI chr12:5,973,062...5,978,565 JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1ca protein phosphatase 1 catalytic subunit alpha IDA RGD PMID:7720853 RGD:2304267 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta IDA RGD PMID:7720853 RGD:2304267 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824
JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B acts_upstream_of_or_within IDA
ISO
(PMID:22225877) RGD PMID:22225877 PMID:7720853 PMID:11716774 RGD:2304267, RGD:2306167 NCBI chr16:56,830,011...56,842,395
Ensembl chr16:56,829,660...56,842,406
JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C IDA RGD PMID:11716774 RGD:2306167 NCBI chr 1:234,460,958...234,465,961
Ensembl chr 1:234,460,652...234,465,961
JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D IDA RGD PMID:11716774 RGD:2306167 NCBI chr 3:165,502,384...165,505,455
Ensembl chr 3:165,502,384...165,505,455
JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E IDA RGD PMID:15752363 RGD:2306166 NCBI chr15:28,348,443...28,349,603
Ensembl chr15:28,347,854...28,349,603
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11797
      primary metabolic process 10530
        carbohydrate metabolic process 626
          polysaccharide metabolic process 110
            polysaccharide catabolic process 22
              alpha-linked polysaccharide catabolism to maltopentaose 0
              alpha-linked polysaccharide catabolism to maltotriose 0
              arabinan catabolic process 0
              cell wall polysaccharide catabolic process + 0
              cellular polysaccharide catabolic process + 21
              galactoglucomannan catabolic process + 0
              galactomannan catabolic process + 0
              glucan catabolic process + 20
              glucomannan catabolic process + 0
              glycolysis from storage polysaccharide through glucose-1-phosphate 1
              homogalacturonan catabolic process 0
              pectin catabolic process + 0
paths to the root